Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d001825_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:1530585:1535057:-1 gene:Zm00001d001825 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

ATGCCGGAGGCGGCGCGGGGCCTGCTGGATCCGGCGGCCGAGGGGGAGGTGGAGCAGGAG
GAGGAGTTCTACGAGTCGCTGGATCGGATCCTCTCCTCCTCCTGCTCCTCCACCTCCGCC
TCCGCCTCCGACGACGACGCCGACCACCACCGCCGCCGCGGCAGCAGGCGCCACCACCAC
CCGCCATCCTCCGCGTACGACGTCTGGATCTCCGAGCCCACGTCCGTCGAGGAGCGCCGC
CGCCACCTGCTCCACCGCCTCGGCCTCACCACCGACCCGCCGCCGCCGCCGCCGCCTCCT
CGCCGCTCGCCATCGCCTCCCGCGTCTCCCCCGGCCTCGCCTCCGGCGCCCGCGGAGGAG
CCCAGATCCGGCGGTGCGCTCGGGAGGCCCCCGCTGGCGCGGAACCCCAGCTCCAGCGGC
GGGGAGCAGCAATGCCGGATCCGGAACCTGGACGACGGCACGGAGTTCGAGGTCGGGGAG
GTGCAGGTGGTGCGGGAGGTGGGCACCGGCCGCCACCTCACCCTCGAGGAGTTCGAGCTC
TGCGTCGGCCGCTCCCCGATCGTGCACGAGCTCATGAAGCGGGCCACCACCGCGGCCTCC
GCGTCCGCCTCCGGGCACGCCGCCCCCGCGTCCAGCAAGCCCCGGAGGAAGCCCGGAGGC
GGCTGGCTGCGTGGCATCAGGCAGCTGGCGGGCACCGTCGCCTACGGCCGCCGCTGCGCC
GACGAGGGGGACAAGGTCAAGGAGAAGAAGGAGAGGGAGGCTCGGCGCCTCAGCTCTGCC
ACTGATGACAGCCTCGATGGCACCGGCTCGCGCAATGCGGGAAGGGTTCGGGTGCGCCAG
TACGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACGCAGGAGTTGGCTGCCCAC
TCCGGCTCCGTGTGGTGCATCAACTTCAGCCTGGATGGACGATACCTTGCCACTGCTGGA
GAGGACCGCGTGATCCATGTGTGGGAGGTGTCCGAGGGAGACCGAAAGGGCGAGTTGCTC
GGGGAAGCTTCGGTGGCAAAGGAGAATGGTGGTGGCTGCAGTCCGTTTCTCGCGATTGTT
GGGAATGATTCACCGGAGATGGCTGCATTGTCGTTCACCTGCGCCGAAGGGGGCTATGTG
GACAAGAGGAGAAGGCCGAGGAAGCAGAACAATCACAAGTCTGTAGGGTCCGATCATCTG
GTTGTTCCTGAGTGTGTGTTTGGTTTCACAGACAAGCCAGTCTGCTCACTTCTGGGGCAT
GCTGCCGATGTTCTTGATCTGTCATGGTCCAAATCTCAGTACTTGATCTCATCCTCCATG
GACAAAACTGTTAAGCTCTGGGACATCACTACCAGTACCTGTTTGAAAACATTCTCTCAT
ACGGACTATGTGACTTGCATCCAGTTCAACCCTGTAGATGATAACTTCTTCATTAGTGGA
TCACTGGATGAGAAAGTTCGCATTTGGAATGTCCGAGATCGTAAGATTGAGGATTGGAAT
GATCTTCATGAGATGGTTACTGCTGCTTGCTATTCCCCTGATGGACAGGTTGCGATGGTG
GGCTCTCACAAGGGAAGCTGTCATATATTTGATACATCTGAGAAGAAGCTTCAGTACAAA
AGTCAGATAGATTTAAGAATTAGGAAAAAGAAGTCAGGCCAGAAGAAGATAACTGGCTTC
CAGTTTGCTCCTGGAAGCTCCTCGGAAGTTCTGATTACTTCTGCAGATTCGAGAATACGA
GTTGTTAACGGCGATGAATTTGTTCACAAGTTTAAAGGGTTTCGGAACACGAGTAGCCAA
ATCTCAGCTTCTGTAGCTCAGAACGGGAAATACGTGATCTGTGCCAGCGAGGATTCTCAC
GTCTATGTGTGGAGACATGACAACAGTTCCCACCCTAGCAGGAGCAGGAGCACAGTTGAC
GTAACCAACTCATACGAACATTTCCACTGCCATGGTGTGACCGTGGCTGTCACATGGCCT
GGTGCTGAAGCCCGATGTTCGTTTGGACCTGGAAGCAGCAGGCACAGTGATTCAGATGGG
GCAGTGAACTCTGGCCGGGACCTCCCAGTTGAGAACACTCGGCACAGCTCTGATGCAGCT
GATATCAGATGCAACGAGAGCCCAGCTTGCGAAGGCGTGACCAGCAGAAGCACCAGCAGA
CATCCAGGCGACGGAGCGTCCACGTCCTGGCCTGACGAAAAGTTGCCGTCAGCCAAGAGC
AGCCCTGGTCACTGTTCCTCCGATCTTTGCATTGGAGCTATGGATGTCCAACGCCGGTCT
GCGTGGGGCTTGGTGATTGTCACCGCTGGACGGGGAGGCGAGATCAGGGTGTTCCAGAAT
TTTGGCTTCCCAGTCCAAGTGTAA

Peptide Sequence

PEP ID

Zm00001d001825_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:1530585:1535057:-1 gene:Zm00001d001825 transcript:Zm00001d001825_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

MPEAARGLLDPAAEGEVEQEEEFYESLDRILSSSCSSTSASASDDDADHHRRRGSRRHHH
PPSSAYDVWISEPTSVEERRRHLLHRLGLTTDPPPPPPPPRRSPSPPASPPASPPAPAEE
PRSGGALGRPPLARNPSSSGGEQQCRIRNLDDGTEFEVGEVQVVREVGTGRHLTLEEFEL
CVGRSPIVHELMKRATTAASASASGHAAPASSKPRRKPGGGWLRGIRQLAGTVAYGRRCA
DEGDKVKEKKEREARRLSSATDDSLDGTGSRNAGRVRVRQYGKACKELTGLFMTQELAAH
SGSVWCINFSLDGRYLATAGEDRVIHVWEVSEGDRKGELLGEASVAKENGGGCSPFLAIV
GNDSPEMAALSFTCAEGGYVDKRRRPRKQNNHKSVGSDHLVVPECVFGFTDKPVCSLLGH
AADVLDLSWSKSQYLISSSMDKTVKLWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISG
SLDEKVRIWNVRDRKIEDWNDLHEMVTAACYSPDGQVAMVGSHKGSCHIFDTSEKKLQYK
SQIDLRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGDEFVHKFKGFRNTSSQ
ISASVAQNGKYVICASEDSHVYVWRHDNSSHPSRSRSTVDVTNSYEHFHCHGVTVAVTWP
GAEARCSFGPGSSRHSDSDGAVNSGRDLPVENTRHSSDAADIRCNESPACEGVTSRSTSR
HPGDGASTSWPDEKLPSAKSSPGHCSSDLCIGAMDVQRRSAWGLVIVTAGRGGEIRVFQN
FGFPVQV

Transcript Sequence

Transcript ID

Zm00001d001825_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:1530585:1535057:-1 gene:Zm00001d001825 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

CCGATGTGCGGGCGCGGCACAGGCCACCACCACCAACTGTCCTCTTGCCGTTTCACTCAG
CTTTTCGCCTGCTGGTTCCCCCCAATTCTAGCGAGGTAAGGTATTTGCCCCGGGCCCCGC
CCGTCATCGTCAGGAGATCCTCGGCCGCACGCCTCGGCCTCGACGTGCCGAGCAGCTTCC
CGTCCCGTCCGCGAGACGCCAGCCAAATGGCGCCGTGCGTGCTCAGCAGTCAGCACTTCC
ACCTCCATGGGGATGGGGCTCCCACTTCCACCCCGTCGCTGCTGAACTGAACCATCCTAG
TAGGTGTCGGCTCCGGCTCCGGGCTCCCTCTCCCCCTTTCCCTTCCCTTCCACCAGCCGG
ACTGCCGAACTCCGAACCGAAGGAGAGTGACGACGCGCCCCGCGCACGCATCGCAGTCGC
ATCAGTAACAAACAAAGGCAGAAGCTGTAACAACGACAGGAAACCAAACACCTCGCGTAT
AGAATCCGCCCGCCTGGTGGGGCGAGTAGGTGGCTGCCGGTGCCGGAGGGACGGCAATGC
CGGAGGCGGCGCGGGGCCTGCTGGATCCGGCGGCCGAGGGGGAGGTGGAGCAGGAGGAGG
AGTTCTACGAGTCGCTGGATCGGATCCTCTCCTCCTCCTGCTCCTCCACCTCCGCCTCCG
CCTCCGACGACGACGCCGACCACCACCGCCGCCGCGGCAGCAGGCGCCACCACCACCCGC
CATCCTCCGCGTACGACGTCTGGATCTCCGAGCCCACGTCCGTCGAGGAGCGCCGCCGCC
ACCTGCTCCACCGCCTCGGCCTCACCACCGACCCGCCGCCGCCGCCGCCGCCTCCTCGCC
GCTCGCCATCGCCTCCCGCGTCTCCCCCGGCCTCGCCTCCGGCGCCCGCGGAGGAGCCCA
GATCCGGCGGTGCGCTCGGGAGGCCCCCGCTGGCGCGGAACCCCAGCTCCAGCGGCGGGG
AGCAGCAATGCCGGATCCGGAACCTGGACGACGGCACGGAGTTCGAGGTCGGGGAGGTGC
AGGTGGTGCGGGAGGTGGGCACCGGCCGCCACCTCACCCTCGAGGAGTTCGAGCTCTGCG
TCGGCCGCTCCCCGATCGTGCACGAGCTCATGAAGCGGGCCACCACCGCGGCCTCCGCGT
CCGCCTCCGGGCACGCCGCCCCCGCGTCCAGCAAGCCCCGGAGGAAGCCCGGAGGCGGCT
GGCTGCGTGGCATCAGGCAGCTGGCGGGCACCGTCGCCTACGGCCGCCGCTGCGCCGACG
AGGGGGACAAGGTCAAGGAGAAGAAGGAGAGGGAGGCTCGGCGCCTCAGCTCTGCCACTG
ATGACAGCCTCGATGGCACCGGCTCGCGCAATGCGGGAAGGGTTCGGGTGCGCCAGTACG
GGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACGCAGGAGTTGGCTGCCCACTCCG
GCTCCGTGTGGTGCATCAACTTCAGCCTGGATGGACGATACCTTGCCACTGCTGGAGAGG
ACCGCGTGATCCATGTGTGGGAGGTGTCCGAGGGAGACCGAAAGGGCGAGTTGCTCGGGG
AAGCTTCGGTGGCAAAGGAGAATGGTGGTGGCTGCAGTCCGTTTCTCGCGATTGTTGGGA
ATGATTCACCGGAGATGGCTGCATTGTCGTTCACCTGCGCCGAAGGGGGCTATGTGGACA
AGAGGAGAAGGCCGAGGAAGCAGAACAATCACAAGTCTGTAGGGTCCGATCATCTGGTTG
TTCCTGAGTGTGTGTTTGGTTTCACAGACAAGCCAGTCTGCTCACTTCTGGGGCATGCTG
CCGATGTTCTTGATCTGTCATGGTCCAAATCTCAGTACTTGATCTCATCCTCCATGGACA
AAACTGTTAAGCTCTGGGACATCACTACCAGTACCTGTTTGAAAACATTCTCTCATACGG
ACTATGTGACTTGCATCCAGTTCAACCCTGTAGATGATAACTTCTTCATTAGTGGATCAC
TGGATGAGAAAGTTCGCATTTGGAATGTCCGAGATCGTAAGATTGAGGATTGGAATGATC
TTCATGAGATGGTTACTGCTGCTTGCTATTCCCCTGATGGACAGGTTGCGATGGTGGGCT
CTCACAAGGGAAGCTGTCATATATTTGATACATCTGAGAAGAAGCTTCAGTACAAAAGTC
AGATAGATTTAAGAATTAGGAAAAAGAAGTCAGGCCAGAAGAAGATAACTGGCTTCCAGT
TTGCTCCTGGAAGCTCCTCGGAAGTTCTGATTACTTCTGCAGATTCGAGAATACGAGTTG
TTAACGGCGATGAATTTGTTCACAAGTTTAAAGGGTTTCGGAACACGAGTAGCCAAATCT
CAGCTTCTGTAGCTCAGAACGGGAAATACGTGATCTGTGCCAGCGAGGATTCTCACGTCT
ATGTGTGGAGACATGACAACAGTTCCCACCCTAGCAGGAGCAGGAGCACAGTTGACGTAA
CCAACTCATACGAACATTTCCACTGCCATGGTGTGACCGTGGCTGTCACATGGCCTGGTG
CTGAAGCCCGATGTTCGTTTGGACCTGGAAGCAGCAGGCACAGTGATTCAGATGGGGCAG
TGAACTCTGGCCGGGACCTCCCAGTTGAGAACACTCGGCACAGCTCTGATGCAGCTGATA
TCAGATGCAACGAGAGCCCAGCTTGCGAAGGCGTGACCAGCAGAAGCACCAGCAGACATC
CAGGCGACGGAGCGTCCACGTCCTGGCCTGACGAAAAGTTGCCGTCAGCCAAGAGCAGCC
CTGGTCACTGTTCCTCCGATCTTTGCATTGGAGCTATGGATGTCCAACGCCGGTCTGCGT
GGGGCTTGGTGATTGTCACCGCTGGACGGGGAGGCGAGATCAGGGTGTTCCAGAATTTTG
GCTTCCCAGTCCAAGTGTAAAGCTAGCGTGAGAGCATGCAGATAGGGAGGGGTTTGTTTG
GTTCTTTTTACTGTACATATATCGGTAGATCGTCGACAGTTTTTTTACTGAAAAGTTCTC
CCTGTTTCCCTGTGTCGTTGGATGCATCGGATTGTAGTCCAGAACCACACTACCAATATG
CTTAACACTCTCACTTCTTGTTGATACAGTGCAAAGCATAGTGTAATTGTATGCTTAGAG
CAACTCATTCCA