Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d001780_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:2:710609:717274:-1 gene:Zm00001d001780 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1
Sequence	ATGGGCGCCTGCGTGTCCAAGGCCGCCTGCTGCTGCCGCCAGCCGCACAACGGGGTTACC AACGAGAGGACTGATACTGTGACGGAGGACGAGGAGGCATACGACCTGCCTGCGTTCCAG GAGTTCACCTTCGAGCAGTTGCGGCTAGCTACATCGGGGTTTGCGGTGGAGAACATCGTG TCCGAGCAAGGTGAGAAGGCGCCCAATGTGGTATACAAGGGGAAGCTCGATGCCCAGCGC CGCATTGCTGTCAAGCGCTTTAACCGCTCTGCCTGGCCCGACCCGCGCCAGTTCCTGGAA GAAGCTAGATCAGTTGGCCTGCTCCGAAGCAAAAGGTTGGCAAATTTGCTTGGTTGTTGC TGTGAAGGCGATGAGAGATTGCTTGTTGCAGAATACATGCCCAATGATACGCTAGCGAAG CACCTTTTCCATTGGGAGTCACAATCAATGAAATGGACCATGAGATTAAGGGTTGTTCTC TGTCTCGCTGAGGCTTTAGAATATTGCACTAACAGGGGCCGTGCTCTCTACCATGATCTC AATGCCTATAGAGCTCTGTTTGATGATGACTGTAACCCTAGACTTTCCTGTTTCGGTCTC ATGAAGAACAGCCGGGATGGAAAAAGTTACAGTACCAATTTGGCATTTACGCCTCCAGAA TACATGAGGACTGGACGTATTACTCCTGAAAGTGTCATATACAGCTTTGGAACCTTGCTG ATTGATGTTCTTAGTGGGAAGCATATTCCTCCGAGCCATGCCCTTGACCTGATTCGGGAC CGAAACTTCAATATGCTCTTAGACTCATGTTTAGAGGGTCAATTTTCAAATGAGGAAGGA ACAGAAATGGTCCGATTAGCTTCAAGATGCCTTCACTATGAACCCCGTGAGCGACCTAAT GTCAGATCACTTGTGCAAGTATTGACTCCTCTACAGAGGGATGTCGAGACTCCATCTTAT GTGCTCATGGGCATTCCGCGTGGTGGGGCATCTTCTACCGAACCACTGAATCTTTCCCCT CTTGCCGAAGCTTGTTCCAGAAAGGATCTGACAGCAATACATGAAATTCTAGAAAAGACA GGCTACAAGGATGATGAGGGAACTGCAAATGAGCTCTCTTTTCAGATGTGGACGAATCAG ATGCAAGATACGTTGAACTCAAAAAAGAAGGGTGACAATGCTTTTCGACAGAAGGATTTT ACTGCTGCCATTGATTGCTATTCCCAGTTTATTGAAGTTGGTACAATGGTTTCCCCAACC ATTTATGCTCGACGTTGCCTGTCATATCTGATGAATGGCATGCCACAGGAGGCATTGAAT GATGCAATGAATGCTTTGGTAATATCTCCCACATGGTCAACAGCATTCTATCTTCAGGCA GCAGCACTATTATCACAAGGCATGGAGAATGAAGCACAAGAAGCACTCAAGGATGGTTGT AACTTAGAGCAAAGTAGCAGCGGTGGACATTGA

Peptide Sequence

PEP ID	Zm00001d001780_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:2:710609:717274:-1 gene:Zm00001d001780 transcript:Zm00001d001780_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1
Sequence	MGACVSKAACCCRQPHNGVTNERTDTVTEDEEAYDLPAFQEFTFEQLRLATSGFAVENIV SEQGEKAPNVVYKGKLDAQRRIAVKRFNRSAWPDPRQFLEEARSVGLLRSKRLANLLGCC CEGDERLLVAEYMPNDTLAKHLFHWESQSMKWTMRLRVVLCLAEALEYCTNRGRALYHDL NAYRALFDDDCNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYMRTGRITPESVIYSFGTLL IDVLSGKHIPPSHALDLIRDRNFNMLLDSCLEGQFSNEEGTEMVRLASRCLHYEPRERPN VRSLVQVLTPLQRDVETPSYVLMGIPRGGASSTEPLNLSPLAEACSRKDLTAIHEILEKT GYKDDEGTANELSFQMWTNQMQDTLNSKKKGDNAFRQKDFTAAIDCYSQFIEVGTMVSPT IYARRCLSYLMNGMPQEALNDAMNALVISPTWSTAFYLQAAALLSQGMENEAQEALKDGC NLEQSSSGGH

Transcript Sequence

Transcript ID	Zm00001d001780_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:710609:717274:-1 gene:Zm00001d001780 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1
Sequence	GTGCTGCTGCTAGCCTAGCCTAGCCTGCTACTCGAACTTCTCGTCTCGTCTCCTCCTCGC TCAGGCAGGGGAACCCAACGGAACTCCTCCTCCCCAGCAGACAGCCGAGAGTACATAGGA GACGAGAAGATCCCATCCACTACCGCCCGGTCGCGGTCCTCCGCCCTCCGCCCTCCCCGC CGCTCGTTCGGTGCAGGTCGCCCTCGCGTGGATCGGAATGGGCGCCTGCGTGTCCAAGGC CGCCTGCTGCTGCCGCCAGCCGCACAACGGGGTTACCAACGAGAGGACTGATACTGTGAC GGAGGACGAGGAGGCATACGACCTGCCTGCGTTCCAGGAGTTCACCTTCGAGCAGTTGCG GCTAGCTACATCGGGGTTTGCGGTGGAGAACATCGTGTCCGAGCAAGGTGAGAAGGCGCC CAATGTGGTATACAAGGGGAAGCTCGATGCCCAGCGCCGCATTGCTGTCAAGCGCTTTAA CCGCTCTGCCTGGCCCGACCCGCGCCAGTTCCTGGAAGAAGCTAGATCAGTTGGCCTGCT CCGAAGCAAAAGGTTGGCAAATTTGCTTGGTTGTTGCTGTGAAGGCGATGAGAGATTGCT TGTTGCAGAATACATGCCCAATGATACGCTAGCGAAGCACCTTTTCCATTGGGAGTCACA ATCAATGAAATGGACCATGAGATTAAGGGTTGTTCTCTGTCTCGCTGAGGCTTTAGAATA TTGCACTAACAGGGGCCGTGCTCTCTACCATGATCTCAATGCCTATAGAGCTCTGTTTGA TGATGACTGTAACCCTAGACTTTCCTGTTTCGGTCTCATGAAGAACAGCCGGGATGGAAA AAGTTACAGTACCAATTTGGCATTTACGCCTCCAGAATACATGAGGACTGGACGTATTAC TCCTGAAAGTGTCATATACAGCTTTGGAACCTTGCTGATTGATGTTCTTAGTGGGAAGCA TATTCCTCCGAGCCATGCCCTTGACCTGATTCGGGACCGAAACTTCAATATGCTCTTAGA CTCATGTTTAGAGGGTCAATTTTCAAATGAGGAAGGAACAGAAATGGTCCGATTAGCTTC AAGATGCCTTCACTATGAACCCCGTGAGCGACCTAATGTCAGATCACTTGTGCAAGTATT GACTCCTCTACAGAGGGATGTCGAGACTCCATCTTATGTGCTCATGGGCATTCCGCGTGG TGGGGCATCTTCTACCGAACCACTGAATCTTTCCCCTCTTGCCGAAGCTTGTTCCAGAAA GGATCTGACAGCAATACATGAAATTCTAGAAAAGACAGGCTACAAGGATGATGAGGGAAC TGCAAATGAGCTCTCTTTTCAGATGTGGACGAATCAGATGCAAGATACGTTGAACTCAAA AAAGAAGGGTGACAATGCTTTTCGACAGAAGGATTTTACTGCTGCCATTGATTGCTATTC CCAGTTTATTGAAGTTGGTACAATGGTTTCCCCAACCATTTATGCTCGACGTTGCCTGTC ATATCTGATGAATGGCATGCCACAGGAGGCATTGAATGATGCAATGAATGCTTTGGTAAT ATCTCCCACATGGTCAACAGCATTCTATCTTCAGGCAGCAGCACTATTATCACAAGGCAT GGAGAATGAAGCACAAGAAGCACTCAAGGATGGTTGTAACTTAGAGCAAAGTAGCAGCGG TGGACATTGATTGTGAACATATTTGTAGTCCCCAAAATGCACATAATGTCAGGTATATAT ATATATATATACTTTTT