Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d001773_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:477842:481305:1 gene:Zm00001d001773 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGTGGACACCTCCACCTCCCCCCATTCCGCCGCCGGCGGCGGCACCATCATCGACGAC CTCCACGGCTTCCTCCGCCACCGTCTACGCACCCACTCCTCCGTCCTCTGCGCCCACGCC TTCCTCTTCCGCCGTGGCCTCCTCCTCGGCCACCCCGTCCCCGCCGGCCTCCTCCTCACC GCCTCCGCCTGCTCCGCCGCCTCGCCGCCCGCTCACATCCTCCGCCTCCTTCGCCACCTA CCTCCTCCCCTGCCGCTCTTCTCCCTCGATGCTGCACTCCGCGCCCTAGGCCCTCGCATC CCTTTCTCCGCCCTCCTCTCCCTCTTCGCGGCCCTCCTCCGCTCCCACCACCCGCTATTC CCCGACCACTTCTCCTTCCCGCCTCTCCTCTCTGCTGCCGCCTCCTCCACCTCTCCGCGG CTCCACTTCCGCTCCGCGCTCGCTCTCCACGGGCAGCTCCTCCGCCGCGGCCTCCTCTTC TCTTCGCCGCCCCACGCCGCCAACGCCCTCTTCCACTTTTATGCCACTGCCGGCGGCATC TTGTCCGCCCGCTACCTGTTCGACGAAATGCCATTCAGGGACATCGCGTCCTGCAACACC CTGATGACGGCCTTAGCCAGAACACCCAGTGGCTTGGATGCCGCACGCCAGGTTTTTGAG GGAATGCACTTGAGAAATGTGGTGTCATGGAACGTCATGATTAACGGATACGTCAAGGCG AAGCAGCCTGAGCAGGCACTGGAGGTGGTCCGGTGGATGGCAGAGGTAGGAGTTAGGGGA ACGGCAATAACCATGGTTGGGGCAGCCACATCATGTGCTAGGCTGGGGAGGTTGGGGGCT GGGAGGGAGGTGCACTGTGCGTTTTTGCGCCGTTTTGAGGATGATAACCTGTTGGTTTGG ACTGCATTGATTGATATGTATGGCAAGTGTCGGAGGGCTGGGATTGCGAGGAAGGTGTTT GATCAGCTCAGAATGAGGAACCTGGTATGCTGGAACGCGATGATCATAGGGCACTGTGTG TATGGTGAGCCTGTTGATGGGATCAAACTGTTCCAGCATATGATTGCACTAGGGAATGTG CAGCCAGATGGAGTCACTTTCATTGGTGTTCTCTGCGCCTGTGCCCGTTTAGGCCTCTTG GAGGATGGAAAGGCATATTTTGAGCAGATGAACACCACATACAACTTCAAGCCGACATTT TCGCACTACTGGTGCATGGCTAATCTGTATGGGAGTGTTGGGCTTCTGGAAGAAGCCGAG GGCCTCTTACAGAATATACCAGAGGATCTGAAGGCACGCGCATTGGGTGGTTTGCTTGGG CTGTGTCGGTTCCGGAGGGATTGGAGACTTGGGGAACGTATAGCTCTCAGGTTGATTGAG CTTGAACCAAGTAACAATGCTCACTATGCCCTGCTTTGCAATGTGTACGCTGCTGCAGGG AGATGGGAAGAAGTTCACAGGGTGAAGGCTATCATGAAAGAGAGAGATGAGAGGTTCAGC CCTGGACATCGTCTGGTAAACTTAAATGAGATTGTTGATGAATTCAAAATTAGGGAGAGG CAACCTGAGAATCAGGAGATATATTTCATCCTGGACGACTTGGTCTCAAAGCTGAAGCTT GATTGCAAAGAAAAGGAGAAAAATGATTTTTGA

Peptide Sequence

PEP ID	Zm00001d001773_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:477842:481305:1 gene:Zm00001d001773 transcript:Zm00001d001773_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MVDTSTSPHSAAGGGTIIDDLHGFLRHRLRTHSSVLCAHAFLFRRGLLLGHPVPAGLLLT ASACSAASPPAHILRLLRHLPPPLPLFSLDAALRALGPRIPFSALLSLFAALLRSHHPLF PDHFSFPPLLSAAASSTSPRLHFRSALALHGQLLRRGLLFSSPPHAANALFHFYATAGGI LSARYLFDEMPFRDIASCNTLMTALARTPSGLDAARQVFEGMHLRNVVSWNVMINGYVKA KQPEQALEVVRWMAEVGVRGTAITMVGAATSCARLGRLGAGREVHCAFLRRFEDDNLLVW TALIDMYGKCRRAGIARKVFDQLRMRNLVCWNAMIIGHCVYGEPVDGIKLFQHMIALGNV QPDGVTFIGVLCACARLGLLEDGKAYFEQMNTTYNFKPTFSHYWCMANLYGSVGLLEEAE GLLQNIPEDLKARALGGLLGLCRFRRDWRLGERIALRLIELEPSNNAHYALLCNVYAAAG RWEEVHRVKAIMKERDERFSPGHRLVNLNEIVDEFKIRERQPENQEIYFILDDLVSKLKL DCKEKEKNDF

Transcript Sequence

Transcript ID	Zm00001d001773_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:477842:481305:1 gene:Zm00001d001773 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGTGGACACCTCCACCTCCCCCCATTCCGCCGCCGGCGGCGGCACCATCATCGACGAC CTCCACGGCTTCCTCCGCCACCGTCTACGCACCCACTCCTCCGTCCTCTGCGCCCACGCC TTCCTCTTCCGCCGTGGCCTCCTCCTCGGCCACCCCGTCCCCGCCGGCCTCCTCCTCACC GCCTCCGCCTGCTCCGCCGCCTCGCCGCCCGCTCACATCCTCCGCCTCCTTCGCCACCTA CCTCCTCCCCTGCCGCTCTTCTCCCTCGATGCTGCACTCCGCGCCCTAGGCCCTCGCATC CCTTTCTCCGCCCTCCTCTCCCTCTTCGCGGCCCTCCTCCGCTCCCACCACCCGCTATTC CCCGACCACTTCTCCTTCCCGCCTCTCCTCTCTGCTGCCGCCTCCTCCACCTCTCCGCGG CTCCACTTCCGCTCCGCGCTCGCTCTCCACGGGCAGCTCCTCCGCCGCGGCCTCCTCTTC TCTTCGCCGCCCCACGCCGCCAACGCCCTCTTCCACTTTTATGCCACTGCCGGCGGCATC TTGTCCGCCCGCTACCTGTTCGACGAAATGCCATTCAGGGACATCGCGTCCTGCAACACC CTGATGACGGCCTTAGCCAGAACACCCAGTGGCTTGGATGCCGCACGCCAGGTTTTTGAG GGAATGCACTTGAGAAATGTGGTGTCATGGAACGTCATGATTAACGGATACGTCAAGGCG AAGCAGCCTGAGCAGGCACTGGAGGTGGTCCGGTGGATGGCAGAGGTAGGAGTTAGGGGA ACGGCAATAACCATGGTTGGGGCAGCCACATCATGTGCTAGGCTGGGGAGGTTGGGGGCT GGGAGGGAGGTGCACTGTGCGTTTTTGCGCCGTTTTGAGGATGATAACCTGTTGGTTTGG ACTGCATTGATTGATATGTATGGCAAGTGTCGGAGGGCTGGGATTGCGAGGAAGGTGTTT GATCAGCTCAGAATGAGGAACCTGGTATGCTGGAACGCGATGATCATAGGGCACTGTGTG TATGGTGAGCCTGTTGATGGGATCAAACTGTTCCAGCATATGATTGCACTAGGGAATGTG CAGCCAGATGGAGTCACTTTCATTGGTGTTCTCTGCGCCTGTGCCCGTTTAGGCCTCTTG GAGGATGGAAAGGCATATTTTGAGCAGATGAACACCACATACAACTTCAAGCCGACATTT TCGCACTACTGGTGCATGGCTAATCTGTATGGGAGTGTTGGGCTTCTGGAAGAAGCCGAG GGCCTCTTACAGAATATACCAGAGGATCTGAAGGCACGCGCATTGGGTGGTTTGCTTGGG CTGTGTCGGTTCCGGAGGGATTGGAGACTTGGGGAACGTATAGCTCTCAGGTTGATTGAG CTTGAACCAAGTAACAATGCTCACTATGCCCTGCTTTGCAATGTGTACGCTGCTGCAGGG AGATGGGAAGAAGTTCACAGGGTGAAGGCTATCATGAAAGAGAGAGATGAGAGGTTCAGC CCTGGACATCGTCTGGTAAACTTAAATGAGATTGTTGATGAATTCAAAATTAGGGAGAGG CAACCTGAGAATCAGGAGATATATTTCATCCTGGACGACTTGGTCTCAAAGCTGAAGCTT GATTGCAAAGAAAAGGAGAAAAATGATTTTTGAATAAAATAACTCAAATACACACCTGGG GATCATTTTGGTGCTGCACAGGTTTCGAATGGGCAGCTTCAGGAGGTTAAGTTAGGTTGG GTATGAAGTGGTGCATCTTCAGATGTGTCATTTGTGCAGAACCACTCTCTGATTATGTAG TTGCTAAAATGCTTGGCATCAGTAGTTGGTAGTTGCCAAAAGTGACAATTATGGTACGGT TGAGATGGACAGGAAGAACGAAGAAGTAACAAGCCATGGGAAGCAAAGATAACCTTTCTG TTATTGCCCTCTAACACAAACTGAACATTCTCTAACAAGAACACAAGTATTTTCTGCAAA AGTTTTGGTCAATTGATACCTCAGTCCTTTTTCTAAATGTGTCCGACTGTCCGTGCCTTG TACTATCTTGTGCTTGGGATCTGGCCTTGAGAATAAGATTGCATATTTGCGTGGAGGTAA TACTTGGGTTTTGACAGTAGCTAAGTTACCCTGGTATATGTCTTCAGGTATTCAGCCTGT CAGGTACAAGTATTTCTGAAGACCATAGATTAACACTTGAGTTAGACAAGTTGACCACTG TCCTCGCTGGCTTTGTTACTGGGATGGTAGAACCGCTAGTTGACATTCTTTGGTGGCTTA TCCTTTTATCTTCTTCCTCACAATGTGATCTGGGGTGTGACTGTGAGTGTGTTATATGCT TTGAAGCACAAGAGAGACAAGTTTGACCTCAACTCAAGGAGAGCTGGCTCTTGCTCTGCA GTTCTTGGCTTCAATCAATGGTGTCACAGGCTCCAAAGCCTTTGACGGAGTTACATATGT TCCTTGAACTCTCTGGTCGGATTTCTGAGATCTTTTGAGTTTATACCCTGAGATCTGAGA ACACTGATAACTGGCATCAGTTGGAAATTTGTGTTCGTGGTGTTCTTCCTCAGCTGATGA TATGGCATTTAGTTACTTTTTCTATAAGAAAATCTGAACTACTGTGGTGTCTTCCATTGT CATCAGTCATAAGAATTTATATCATTTCATGAACTGGACATTGTAATACCATCACGAAAG TTAGTGTCATTCCAGAGAATGGTGGGATTCTACAGCAAACCGGGAAGTTGTTCTGTCTCA TTAGGAGAGCAACAGAGGGTTGTGATGGCTCATTGTTTTTCCACCATCCTAGCTCCCAAG TGTGGTATCATCGACGAGTGCCTCAATGCAGGCTGCTAGTGTTGATGTAGAAGAACATTC ATCATCTGTACAGGCCTGCAACTAACTAACATGGCACGCCCGTGGTCACTTCTTCACAAC ATACCCTATACTGTTAGTCAAAACTGTAGGCTGCTCGGAACAAACTGGCGGCGGCGGCGA TAGCGGCTGCTGCTGGTGCTGACTGCTGAACAATCATCATCCCGTAACAGAAACAGAAGA GCAAATTAAGAATTTAAGTAATCAAAGAATC