Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000432_T004
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg2:22860:29086:-1 gene:Zm00001d000432 gene_biotype:protein_coding transcript_biotype:protein_coding description:pescadillo-related
Sequence

ATGCCGAAGCACTACCGCCCTGCGGGTAAGAAGAAGGAAGGGAATGCGGCAAAGTACATC
ACGAGGACCAAGGCGGTCAACTACCTGCAAGTTAGCCTCGCAATCTTTAGGAAGCTATGC
ATTCTAAAGGGTGTCTTTCCACGTCAGCCAAAGAAGAAGGTGGAAGGGAACCACAAGACC
TACTACCACACAAAGGATATTGCATTCCTCGCTCATGACCCTTTGATCGAGAAGTTCAGG
GAGATTAAGGTCCATCGAAGGAAGGTTAAAAAGGCTGTTGCTAAGAAAAACAGGGATCTT
GCAGACAGGCTGTTGAATCGGCCACCAACTTACAAGCTTGATAGGCTTGTCCTTGAAAGG
TATCCAACATTCGTTGATGCTCTTCGTGACTTGGATGACTGCCTTACAATGGTGCATCTG
TTTGCGGCATTACCTGCTGTTGACGGTGAACGTGTTGAGGTCAAACGAATCCATAACTGC
CGCAGGTTAAGCCATGAATGGCAAGCATACATATCCCGAACCCATTCTCTGAGGAAGACA
TTTATTTCCGTGAAGGGCATATATTATCAGGCTGAAGTTCAAGGACAAAAGATCACCTGG
CTAACTCCGCATGCTCTTCAGCAAGTATTAACTGATGATGTTGATTTCAATGTGATGCTT
TCTTTTCTAGAATTCTATGAGACTCTTCTAGGATTTGTGAACTTCAAACTCTATCATTCA
ATAAATGTAAATTATCCTCCTATTCTGGATCCACGTCTGGAAGCTTTAGCTGCTGAGCTC
TATGCATTGTGCCGATACATGTCTGCTGGTTCCAGAAGAATGATTGGGAATTCACAAACT
GACGAAGTAATGGAAGATAAGGATGAGAAAAGTAAAGCTGAGGAAGTAATTAAGGAAGAG
AAGGTTGTGAAGAATAAAGCAAGCTCAAAAGCAGATGAATCTGAGCTCAGATTAGCACAG
CTTCAACATCAGCTCCCAACCAATGAACCTGGTGCACTGATGAATCTTGTAGAAGAATCA
ACTGCCGATGATGCAGATGATGATGATACTAAAGATTGTAAAGGTTTATTTAAGAACTTA
AAGTTCTACTTGAGTCGAGAGGTGCCTAGGGAGTCCCTGTTATTTATAATTCCAGCGTTT
GGAGGGACTGTTTCATGGGAAGGAGAAGGAGCTCCATTTAAAGAAATAGACGAAGATATC
ACTCACCAGATTGTTGATAGGCCGACACAAAGCCATGTTTTCCTCTCCAGGGATTATGTT
CAACCACAGTGGGTCTTTGATTGTGTAAATGCTCGTATCATATTGCCAACAGAAGGTTAT
CTTGTTGGAAGAGTACCTCCACCACATTTGTCTCCTTTTGTGGACAATGATGCCGAGGGC
TACATGCCTGAGTATGCAGAGACAATAAAGAGGCTCCAAGCTGCTGCTCGCAATGAGGTG
TTGCCTCTTCCAGGTATTGGTGATGAAGATCTAGACAATTCACTGGTAGCAGCAATGATG
GATCGAACAGCTTCTAACGAAGCTGCTGAAAAGAAGAGGAAGCTGGAGATGCTAGAGAAG
CAATACATCGATGAACTGAAGAAGGAAATTGATGGCGTTGCTTTCTCTAGTTTGTCAAAC
AAGGAAGCAGATAAATCACCGAATGCAAAAGATGATACTCAGTCAGATCGTGAGGAGGAT
GCCAGTAAACAAGAGGAGGATGATGATGATGATATTGGTACTGCTCTCATGTCTCGCAAG
CAGAGAGGCCTTTATAAGGCTATGAAG

Peptide Sequence

PEP ID

Zm00001d000432_P004
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg2:22860:29086:-1 gene:Zm00001d000432 transcript:Zm00001d000432_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:pescadillo-related
Sequence

MPKHYRPAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKT
YYHTKDIAFLAHDPLIEKFREIKVHRRKVKKAVAKKNRDLADRLLNRPPTYKLDRLVLER
YPTFVDALRDLDDCLTMVHLFAALPAVDGERVEVKRIHNCRRLSHEWQAYISRTHSLRKT
FISVKGIYYQAEVQGQKITWLTPHALQQVLTDDVDFNVMLSFLEFYETLLGFVNFKLYHS
INVNYPPILDPRLEALAAELYALCRYMSAGSRRMIGNSQTDEVMEDKDEKSKAEEVIKEE
KVVKNKASSKADESELRLAQLQHQLPTNEPGALMNLVEESTADDADDDDTKDCKGLFKNL
KFYLSREVPRESLLFIIPAFGGTVSWEGEGAPFKEIDEDITHQIVDRPTQSHVFLSRDYV
QPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEV
LPLPGIGDEDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDGVAFSSLSN
KEADKSPNAKDDTQSDREEDASKQEEDDDDDIGTALMSRKQRGLYKAMK

Transcript Sequence

Transcript ID

Zm00001d000432_T004
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg2:22860:29086:-1 gene:Zm00001d000432 gene_biotype:protein_coding transcript_biotype:protein_coding description:pescadillo-related
Sequence

ACGGCATGCCGCTGGCTCCTCTGTCGCTGGACCCCCCTCCCTTCCGTCTCATCCGCCTCC
GCCCGCCGGCATATAAACCAAAACCCTAAAACCCATCTCCTCCTCTCTTTTCCCCTCCCT
TTTCCAGCACGGGGAGCGACCTGCGCCGCCGCCACGATGCCGAAGCACTACCGCCCTGCG
GGTAAGAAGAAGGAAGGGAATGCGGCAAAGTACATCACGAGGACCAAGGCGGTCAACTAC
CTGCAAGTTAGCCTCGCAATCTTTAGGAAGCTATGCATTCTAAAGGGTGTCTTTCCACGT
CAGCCAAAGAAGAAGGTGGAAGGGAACCACAAGACCTACTACCACACAAAGGATATTGCA
TTCCTCGCTCATGACCCTTTGATCGAGAAGTTCAGGGAGATTAAGGTCCATCGAAGGAAG
GTTAAAAAGGCTGTTGCTAAGAAAAACAGGGATCTTGCAGACAGGCTGTTGAATCGGCCA
CCAACTTACAAGCTTGATAGGCTTGTCCTTGAAAGGTATCCAACATTCGTTGATGCTCTT
CGTGACTTGGATGACTGCCTTACAATGGTGCATCTGTTTGCGGCATTACCTGCTGTTGAC
GGTGAACGTGTTGAGGTCAAACGAATCCATAACTGCCGCAGGTTAAGCCATGAATGGCAA
GCATACATATCCCGAACCCATTCTCTGAGGAAGACATTTATTTCCGTGAAGGGCATATAT
TATCAGGCTGAAGTTCAAGGACAAAAGATCACCTGGCTAACTCCGCATGCTCTTCAGCAA
GTATTAACTGATGATGTTGATTTCAATGTGATGCTTTCTTTTCTAGAATTCTATGAGACT
CTTCTAGGATTTGTGAACTTCAAACTCTATCATTCAATAAATGTAAATTATCCTCCTATT
CTGGATCCACGTCTGGAAGCTTTAGCTGCTGAGCTCTATGCATTGTGCCGATACATGTCT
GCTGGTTCCAGAAGAATGATTGGGAATTCACAAACTGACGAAGTAATGGAAGATAAGGAT
GAGAAAAGTAAAGCTGAGGAAGTAATTAAGGAAGAGAAGGTTGTGAAGAATAAAGCAAGC
TCAAAAGCAGATGAATCTGAGCTCAGATTAGCACAGCTTCAACATCAGCTCCCAACCAAT
GAACCTGGTGCACTGATGAATCTTGTAGAAGAATCAACTGCCGATGATGCAGATGATGAT
GATACTAAAGATTGTAAAGGTTTATTTAAGAACTTAAAGTTCTACTTGAGTCGAGAGGTG
CCTAGGGAGTCCCTGTTATTTATAATTCCAGCGTTTGGAGGGACTGTTTCATGGGAAGGA
GAAGGAGCTCCATTTAAAGAAATAGACGAAGATATCACTCACCAGATTGTTGATAGGCCG
ACACAAAGCCATGTTTTCCTCTCCAGGGATTATGTTCAACCACAGTGGGTCTTTGATTGT
GTAAATGCTCGTATCATATTGCCAACAGAAGGTTATCTTGTTGGAAGAGTACCTCCACCA
CATTTGTCTCCTTTTGTGGACAATGATGCCGAGGGCTACATGCCTGAGTATGCAGAGACA
ATAAAGAGGCTCCAAGCTGCTGCTCGCAATGAGGTGTTGCCTCTTCCAGGTATTGGTGAT
GAAGATCTAGACAATTCACTGGTAGCAGCAATGATGGATCGAACAGCTTCTAACGAAGCT
GCTGAAAAGAAGAGGAAGCTGGAGATGCTAGAGAAGCAATACATCGATGAACTGAAGAAG
GAAATTGATGGCGTTGCTTTCTCTAGTTTGTCAAACAAGGAAGCAGATAAATCACCGAAT
GCAAAAGATGATACTCAGTCAGATCGTGAGGAGGATGCCAGTAAACAAGAGGAGGATGAT
GATGATGATATTGGTACTGCTCTCATGTCTCGCAAGCAGAGAGGCCTTTATAAGGCTATG
AAGGT