Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000406_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg46:27798:28721:-1 gene:Zm00001d000406 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase4 description:Endochitinase EP3
Sequence

ATGGCGAACTCAGCAACACCGCCGCCTACCATGATCCTGACGGCGGCTCTTGGCCTAACA
TTCCTGCTCTGCGCCACGACGCCCACGGCCGCGCAGCACTGCGGCTGCCAGCCAGGCTTC
TGCTGCAGCAAGTATGGATACTGCGGCAAGACCAGCGCCTACTGCGGCGAGGGGTGCAAG
TCGGGCCCGTGTTGGGGCTCCGCAGGTTGCGGCGGCGGCGGCGCGTCCGTGGCGAGGGTC
GTCACCAAGTCCTTCTTCAACGGCATCAAGTCCCATGCCGGGAGCTGGTGCGAGGGCAGA
CGCTTCTACACGCGAAGCGCGTTCCTCGAGGCCATCGCCGCGTACCCGGGCTTCGCGCAT
GGCGGCTCCGAGGTCGAGCGCAAGCGCGAGATTGCCGCCTTCTTCGCGCATGTCACGCAC
GAGACCGGGCATTTGTGCTACATCAACGAGGTCGACGTGGCGAAGTACTGCGACTGGAGC
AGTGAGAAGCAGTGGCCGTGCCACCCCAGGCAGGGTTACTACGGGCGCGGCCCGCTGCAG
CTGTCGTGGAACTACAACTACGGGCCGGCGGGGAGGAGCCTCGGCTTCGACGGGCTGGGA
GACCCGGACAGACTGGCGCAGGACCCCGTGTTGTCGTTCAAGTCGGCGCTCTGGTACTGG
ATGGAGAACATGCACCAGCTCATGCCCCAGGGGTTCGGCGCCACCATCAGGGCCATCAAC
GGCTTCGACGAGTGTCACGGCGGGAAGAACACGGCCGAAATGAAAGACCGGGTGCGCTTC
TACCTCGAGTACTGCCACCACTTCCGTGTTCACCCCGGGCTCGACCTCAGTTGCTAG

Peptide Sequence

PEP ID

Zm00001d000406_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg46:27798:28721:-1 gene:Zm00001d000406 transcript:Zm00001d000406_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase4 description:Endochitinase EP3
Sequence

MANSATPPPTMILTAALGLTFLLCATTPTAAQHCGCQPGFCCSKYGYCGKTSAYCGEGCK
SGPCWGSAGCGGGGASVARVVTKSFFNGIKSHAGSWCEGRRFYTRSAFLEAIAAYPGFAH
GGSEVERKREIAAFFAHVTHETGHLCYINEVDVAKYCDWSSEKQWPCHPRQGYYGRGPLQ
LSWNYNYGPAGRSLGFDGLGDPDRLAQDPVLSFKSALWYWMENMHQLMPQGFGATIRAIN
GFDECHGGKNTAEMKDRVRFYLEYCHHFRVHPGLDLSC

Transcript Sequence

Transcript ID

Zm00001d000406_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg46:27798:28721:-1 gene:Zm00001d000406 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase4 description:Endochitinase EP3
Sequence

ATGGCGAACTCAGCAACACCGCCGCCTACCATGATCCTGACGGCGGCTCTTGGCCTAACA
TTCCTGCTCTGCGCCACGACGCCCACGGCCGCGCAGCACTGCGGCTGCCAGCCAGGCTTC
TGCTGCAGCAAGTATGGATACTGCGGCAAGACCAGCGCCTACTGCGGCGAGGGGTGCAAG
TCGGGCCCGTGTTGGGGCTCCGCAGGTTGCGGCGGCGGCGGCGCGTCCGTGGCGAGGGTC
GTCACCAAGTCCTTCTTCAACGGCATCAAGTCCCATGCCGGGAGCTGGTGCGAGGGCAGA
CGCTTCTACACGCGAAGCGCGTTCCTCGAGGCCATCGCCGCGTACCCGGGCTTCGCGCAT
GGCGGCTCCGAGGTCGAGCGCAAGCGCGAGATTGCCGCCTTCTTCGCGCATGTCACGCAC
GAGACCGGGCATTTGTGCTACATCAACGAGGTCGACGTGGCGAAGTACTGCGACTGGAGC
AGTGAGAAGCAGTGGCCGTGCCACCCCAGGCAGGGTTACTACGGGCGCGGCCCGCTGCAG
CTGTCGTGGAACTACAACTACGGGCCGGCGGGGAGGAGCCTCGGCTTCGACGGGCTGGGA
GACCCGGACAGACTGGCGCAGGACCCCGTGTTGTCGTTCAAGTCGGCGCTCTGGTACTGG
ATGGAGAACATGCACCAGCTCATGCCCCAGGGGTTCGGCGCCACCATCAGGGCCATCAAC
GGCTTCGACGAGTGTCACGGCGGGAAGAACACGGCCGAAATGAAAGACCGGGTGCGCTTC
TACCTCGAGTACTGCCACCACTTCCGTGTTCACCCCGGGCTCGACCTCAGTTGCTAG