Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000400_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg4:41986:43707:-1 gene:Zm00001d000400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

ATGGTTTCCAAGGAGCAGAATAAGCGAGGAGCTTTGCATGAGAAGCTCAAGATTCTCCGC
AGCGTTACTCACTCTCATGCGGGGGATAAAGTGTCGATAATAGCGGACGCGTCATCGTAC
ATCAAGGAACTAAAGCAGAAGATCGCGAAGCTAAGCCAAGAGATGGCATCGTCGTCTCCG
CAGCACGCCACTACTGGTGTCTGCCAACAACAACCGTCGTCGTCGTCGGTGAGTGTGGGA
GTCCTGCTGGACAAGAAGGGCCGTTTCCTCGTCAGTGTGTTCATGGACGAGAGCTGCGGC
CCGCCGCCGGCCGGGCTACTCGCTTCCGTCCTCGAGGCCTTCGACGACATCGGACTCACG
GTGCTCGAGGCTAGGGCTACCTGCGCTGGTTCCTTTCGGCTAGAAGCTGTAGGAGAGGAA
GTAGTAGTAGATGGGGGCCTCATCATCGACGCGCACGCGGTGGAGCAAGCAGTAGTTCAG
GCAATCAAGAATTGCCCTGCAAATTAA

Peptide Sequence

PEP ID

Zm00001d000400_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg4:41986:43707:-1 gene:Zm00001d000400 transcript:Zm00001d000400_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

MVSKEQNKRGALHEKLKILRSVTHSHAGDKVSIIADASSYIKELKQKIAKLSQEMASSSP
QHATTGVCQQQPSSSSVSVGVLLDKKGRFLVSVFMDESCGPPPAGLLASVLEAFDDIGLT
VLEARATCAGSFRLEAVGEEVVVDGGLIIDAHAVEQAVVQAIKNCPAN

Transcript Sequence

Transcript ID

Zm00001d000400_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg4:41986:43707:-1 gene:Zm00001d000400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

TCAGAAAGCAGAGAGAGCGGGCAACATCGCAGATAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGGCAAACTGGAGAGGCCGAGGGTGATGGTTTCCAAGGAGCAGAATAAGC
GAGGAGCTTTGCATGAGAAGCTCAAGATTCTCCGCAGCGTTACTCACTCTCATGCGGGGG
ATAAAGTGTCGATAATAGCGGACGCGTCATCGTACATCAAGGAACTAAAGCAGAAGATCG
CGAAGCTAAGCCAAGAGATGGCATCGTCGTCTCCGCAGCACGCCACTACTGGTGTCTGCC
AACAACAACCGTCGTCGTCGTCGGTGAGTGTGGGAGTCCTGCTGGACAAGAAGGGCCGTT
TCCTCGTCAGTGTGTTCATGGACGAGAGCTGCGGCCCGCCGCCGGCCGGGCTACTCGCTT
CCGTCCTCGAGGCCTTCGACGACATCGGACTCACGGTGCTCGAGGCTAGGGCTACCTGCG
CTGGTTCCTTTCGGCTAGAAGCTGTAGGAGAGGAAGTAGTAGTAGATGGGGGCCTCATCA
TCGACGCGCACGCGGTGGAGCAAGCAGTAGTTCAGGCAATCAAGAATTGCCCTGCAAATT
AAACTAATCGACCTAGTCCTCCAATTCGATCGATCGAGTTGACGATGCGCTGGTGGTGGA
CCACAAAGTTCATGCCAAGCTAGAGACTCCGAGCTATATATACATACTGATTCGCATCGT
ACTTTTTGAAGAGAGCAAAGCAATTTTTTCTCTTTTGCCTGCCGCAACGAGTCAGTCTTG
CGAGTTCTGCTATTTAGTAAGGGGGGCACCTGTGGCCATCGTTTGGCAAATGCCAATATA
TATACCTCAATTATCCAGCTTGCGTATCCAAATTCTAGAGTAAAAGAATTACTCGCACGG
CATCACGGAGATGGCGTAGCTAGCTCCCATCGATCACCCTTCTTCTCTCTACCCCTGATG
AATGTTGTGGTCTTCCTCGAAACATATCCTGGCTGTATGATTTCTGAAGGTTTTCGTTTC
ATCGTCTGTCCACTGAATCTAGCGTGTTGTTTGGTTCATATATTTGTAACGCGACTGATA
ACGTTAAATCATATTTGTTTAAAT