Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000380_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg24:17371:19441:-1 gene:Zm00001d000380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence

ATGGGGAACAGCATCGGGGGCAAGCGCAAGAGCGCCAAGGTGATGCAGCTGGACGGCACC
TCCTTCCGCGTGAAGCCCCCGGCGGCGGCGGCGGCCGACGTGCTGCGGGACCACCCGGGC
TTCCAGCTGCTCGAGTCGGAGGAGGTCAAGCTCCTGGGCGCCCGCGCGCGCCCGCTGGCC
CCCGACGCGCCGCTCCGCCGCGGCCGGCTCTACTTCCTCGTCGCGCTCCCGCGCCGCGCG
CCCGCGGGGGGGCCCATGCGCCGCGCCTGGTCGGGCAACCTCAACGTCGGCGCCCGCGAG
CGGCTCGAGTCGCTCAAGCTCGCGCGCCGCTCCACCTCCGACCTCTCCTCGCTCCCCGCC
CCCGCCCACGCCTCCGCGTCGGCCCCCGCCTCCCCGCTCCCCGGCGGCGGCGGCGCCACG
CCCGTGCGCCTCAAGATGCGCCTCCCCCGGGCGCAGGTGGAGAAGCTCATGGGCGAGAGC
AAGGACCCCGCCGAGGCCGCCGCCAAGATCATGGAGCTCTGCGGCGCGGCCGTGGCGGGC
GACGCGCACGCCAGCGCCCGGGCCACCCCGGACCGCCCGCGGCCCGGGATCCTGCGCAGC
CCTAGGTTCGCCAAGACACCGGAGTGGGGCGCCCGGTTCATGCTGCCGTCGCCGGCGCCG
GCGCCGGCCAAGACGCCGCCGCAGCGGTGGCCCACGCTGCCACGCACCAACGAGAAAAAG
GCGCGGTTCGTAGAGTTGCCGGACGAGCTGATAGCGTGA

Peptide Sequence

PEP ID

Zm00001d000380_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg24:17371:19441:-1 gene:Zm00001d000380 transcript:Zm00001d000380_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence

MGNSIGGKRKSAKVMQLDGTSFRVKPPAAAAADVLRDHPGFQLLESEEVKLLGARARPLA
PDAPLRRGRLYFLVALPRRAPAGGPMRRAWSGNLNVGARERLESLKLARRSTSDLSSLPA
PAHASASAPASPLPGGGGATPVRLKMRLPRAQVEKLMGESKDPAEAAAKIMELCGAAVAG
DAHASARATPDRPRPGILRSPRFAKTPEWGARFMLPSPAPAPAKTPPQRWPTLPRTNEKK
ARFVELPDELIA

Transcript Sequence

Transcript ID

Zm00001d000380_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg24:17371:19441:-1 gene:Zm00001d000380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Encodes a protein whose expression is responsive to nematode infection.
Sequence

CTTTCACCTCCTCGAGCCTCCCTCTCCTCTCCTCTCCTCTGACTCCGCCCCCTTTTAAAA
TTGGGACCCTCGCCGCCGCGCCCCGCAGACCCGCACACACACAGACCACACCTTCTCGCC
CCCTCGCAAGTCGCAGCAGGGACAGCGGCAGCGACGCCACCGCACCACCACCTCGTCCGC
CACCCGCAATGGGGAACAGCATCGGGGGCAAGCGCAAGAGCGCCAAGGTGATGCAGCTGG
ACGGCACCTCCTTCCGCGTGAAGCCCCCGGCGGCGGCGGCGGCCGACGTGCTGCGGGACC
ACCCGGGCTTCCAGCTGCTCGAGTCGGAGGAGGTCAAGCTCCTGGGCGCCCGCGCGCGCC
CGCTGGCCCCCGACGCGCCGCTCCGCCGCGGCCGGCTCTACTTCCTCGTCGCGCTCCCGC
GCCGCGCGCCCGCGGGGGGGCCCATGCGCCGCGCCTGGTCGGGCAACCTCAACGTCGGCG
CCCGCGAGCGGCTCGAGTCGCTCAAGCTCGCGCGCCGCTCCACCTCCGACCTCTCCTCGC
TCCCCGCCCCCGCCCACGCCTCCGCGTCGGCCCCCGCCTCCCCGCTCCCCGGCGGCGGCG
GCGCCACGCCCGTGCGCCTCAAGATGCGCCTCCCCCGGGCGCAGGTGGAGAAGCTCATGG
GCGAGAGCAAGGACCCCGCCGAGGCCGCCGCCAAGATCATGGAGCTCTGCGGCGCGGCCG
TGGCGGGCGACGCGCACGCCAGCGCCCGGGCCACCCCGGACCGCCCGCGGCCCGGGATCC
TGCGCAGCCCTAGGTTCGCCAAGACACCGGAGTGGGGCGCCCGGTTCATGCTGCCGTCGC
CGGCGCCGGCGCCGGCCAAGACGCCGCCGCAGCGGTGGCCCACGCTGCCACGCACCAACG
AGAAAAAGGCGCGGTTCGTAGAGTTGCCGGACGAGCTGATAGCGTGACCTGGGCTTCGCC
GAAGCGAGTTAACACTCCCTTTTTTTTCCTTCTTCTTCAATGTACTGTCGCAAAGCATGT
TTGGTGATCGTGAGGCCAGGAGACGAGGAATTGTAAACTTATCTCCAGGCGGGCGCGCTG
TACTCCTTCAGCCGCTCATATCCGAGCGAAACACAAAGTATGGTTTGAAGATGAGAAGCC
GCCCGATGGCTTCCGATTCACCTTGCTCCAG