Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d000361_T001
CDS Infomation	cds contig:B73_RefGen_v4:B73V4_ctg115:46043:53621:-1 gene:Zm00001d000361 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-transcription factor 115 description:Transcription factor MYB104
Sequence	ATGACCCAGCTGCCTTCAAAGTTCAAAAACAAAATGATGGTGGTGAGGGTGGACGAGAAC CCTGCGCCGGATGGAGAGAACTCTCCCCTGGACGATGAGTACGTCTCGGCCGACGATGAG CACGTTGACAATGAAGACAAGGAGACCGATAGCATCGGCGACTACGAAAACCCCAGTGGG GCGCCCCAGTTGAAGAAGGGTCCTTGGTCGCCCGAAGAGGATAAGCGTCTTAAAGACTAC GTCGAGGTACACGGCGCGGGGAACTGGAATAAGGTGCAGAAGAATGCCATGCTCAACCGT TGTGGCAAGAGCTGCCGTCTCCGCTGGACCAACCACCTCAGGCCCGATCTTAAGAAGGAT CCTTTCGACGCTGAGGAAGAGGAAAAGATAATCAAGCTTTACATCAGGTGGGGCCCCAAG TGGTCCATGATGGCCTCATATTTGCCTGGCCGCACAGATAATGAAATAAAAAACTTTTGG AATACCAGAAAAAGGAGAAAACAGAGATGTGGTTCGCCTCTCCATCCAGAATATATGCTT TCTCAGCTTAGTCATAAAGACATGGACTGTGAAACTCCTGGAGAATCACATGGCAAGAAA CGGTCAAATGAGTGCTCAAAAGAAAAGGTTGTTGATGTGCAAGAACTTGTGGATGAGTTA ATTGTATTTGAGCACCTTGACTATGGTAAGGATACAGTGTTTCCAACCAGACCTTTGAAA TGCCATGCATCTACTAGTAGTGTGCAAATTCCTGGTGCCATTGAGAAAACCTTTTGTCCC ACTGATTTGAACTATGTAATGACAAAGAATCAGTCGGTGCATGTTGGTAGTGCCATTGGC AGTGGCTATCCAGTATATGGTGGCAGACTCTCTACTTCAGGGACCATATTCGGTTCCATT CAGACAGAGATCCCTTCGATCCAAAGTTCCAGCTATAGCCCAAGTAATGACTGGTTGGCT CAATGTCCTTCGGCTTGCATTGAGCAACGGATTCCAATGGAATGCAATACAATATCTCAG TCAAAAGCTTACCTTATGATGCATTCTTCTTCAGCTTTCTGTGCCCCTGAACATGAGGCC TGTTCTGAAACTCAAGCTCCAGACTTATGTTCAGGTTCAGATGCTGTTTTCGACCCCAGC CAGTGTTATCCAGTTGCTAGTTTTTCTGATCTTGGGATCTCGGATACACTACTAACAAAA GGTCTCTTGAATGATATAGCACTAGCAAGTTTGTTGAATGTTAATTTGAAGGACCAGTCA CATATCAACAGGCAGGAACCTACCAATGATACATCACTAGGAGGAGCAAGTTTCTTGAAT GCTAATTTGAAGGACCAGTCACATCTCAACTGGCAGGAACATATGAATGAGACATCACCA GTAGCAGGTTTATTGAATGCTAATTTGGAGGAGCAGTCACATCTCAACTGGCAGGAACCT AAGAATGAGTCATCACCAGAAGCAGGTTTCTTGAATGCTAATTTGGAGGAGCAGTCACAT CTCAACTGGCCCTTGCAGGAATGTGAGCCATGGATTGAGAGACAAATGTTTTGA

Peptide Sequence

PEP ID	Zm00001d000361_P001
PEP Infomation	pep contig:B73_RefGen_v4:B73V4_ctg115:46043:53621:-1 gene:Zm00001d000361 transcript:Zm00001d000361_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-transcription factor 115 description:Transcription factor MYB104
Sequence	MTQLPSKFKNKMMVVRVDENPAPDGENSPLDDEYVSADDEHVDNEDKETDSIGDYENPSG APQLKKGPWSPEEDKRLKDYVEVHGAGNWNKVQKNAMLNRCGKSCRLRWTNHLRPDLKKD PFDAEEEEKIIKLYIRWGPKWSMMASYLPGRTDNEIKNFWNTRKRRKQRCGSPLHPEYML SQLSHKDMDCETPGESHGKKRSNECSKEKVVDVQELVDELIVFEHLDYGKDTVFPTRPLK CHASTSSVQIPGAIEKTFCPTDLNYVMTKNQSVHVGSAIGSGYPVYGGRLSTSGTIFGSI QTEIPSIQSSSYSPSNDWLAQCPSACIEQRIPMECNTISQSKAYLMMHSSSAFCAPEHEA CSETQAPDLCSGSDAVFDPSQCYPVASFSDLGISDTLLTKGLLNDIALASLLNVNLKDQS HINRQEPTNDTSLGGASFLNANLKDQSHLNWQEHMNETSPVAGLLNANLEEQSHLNWQEP KNESSPEAGFLNANLEEQSHLNWPLQECEPWIERQMF

Transcript Sequence

Transcript ID	Zm00001d000361_T001
Transcript Infomation	cdna contig:B73_RefGen_v4:B73V4_ctg115:46043:53621:-1 gene:Zm00001d000361 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-transcription factor 115 description:Transcription factor MYB104
Sequence	AGGCAACCAGCTGCCGAGGGAGGAACCCTAGCGGAACAGGTGACGGCGTCGCGCTACCGG TGACGGCGTCGCGCTACCGGTGACGGGGGATACGGCGGCATCGTCCCCCTCGGCCCCTCC TCCATCCCCGGCGCGGCGGCGCCAGCAGCCGTCCTGCAGGTACGGTCTCCAGTCTCCAGA ATCCAGAGCTTGTCCCTTTTTTCTGGTGTGCTCTGTAGGTATGGGCGTATAGCTGTTGGC CTGTTGCTGCCCATGTCCATGTTTGTTGGTTTTCAGTTTTACTTAGATGCTGAAAGCCTG AAACCTTCCAGTGATTATTCGCTTCATGTTGTAGTATGGCTGTCAGCCTGTTGCTGCCCA TGTCCATGGGCGTATCACGTATGGCTGTTTGCCTTGTTGAAAGCCTGAACCTGAAGCCAT GTCCATGGGCGTGTAGTTATATATATGAAGGTTGATCGGTTCCTATAGCCCTGGACGATC AGGATTTCTGATTGACCGATCAGAGCCCGGTTAATCGGGCTGGTCCTCGACTAATCATGA GGAGCGATCAGCCGATCTGGAAACATTGGTTTGAGCCTAGGAAGCTGCAACTCTATAATA CAGGTCTCGAGCAGCCCAAAATGCACAGAACTGGGATTCACAATTTGAATGAAAGTGACA GAGTTCACAACAAAGCTATATAACTAGAAAAACCAAAGCGGCCTATAGTTTGGGACAGGG AGTGGTAGTAGTAAAAAAACTAAAAAAAAATATGTAGAAGGCACATACTCTCTGGCCATG GCAACTAAGAAAATCTCCTGCATGGTCTGCTTTCAAGTGAGATAGAGCAGACTTGAGTGC CTTCCTCACAAGGTATCTTTCTTGTTGAGATCCCTGCTGTTCTTGCATAGCAGTGGCTAG AGAAAATCAAGGATCGACAGAAAATCCACCTTCTACATATAAATTGAAGCTTTCATTGGG AAAAAAGGCCTGTGAATGACCAAAAGAGTATGCAGTGCACAGTGTGAAAACGGGATATCA TTCATGGTAAGTGTGAATAGCAATATCAATACGAGCAAATGTCATGTTATCCCACTCAAG AAAAGCATTTCCTTCATCACCCAGCAAACTTCCTTTTAACTTGAAACCATAGCTTTGCCA GCCTGTGCTCATCAACACATCAAAAGAGGACTGTGATATCTGACAAGGTACAAAATCTTC AAAATACAGAACCTACAATTGTTGCAACCAACGATGGCATAAACTGTCAGCTCAGTTGAA TCATGATTAACTATAATATCACTGGACACGAAAAAGAATGCATATGGCTGTTGGCCTGTT GCTGCCCATCAGCCCATGTCCATGTTTGTTGGTTTTCAGTTTTACTTAGATGTTGAAAGC CTGAATCCTTCCAGTGATTATTTGCTTCATGCTGTAGTATGGCTGTTGGCCTGTTGCTGC CCATGCCCATGGGCGTATCACGAATGGCTGTTTGCCTTGTTGAAAGCTTGAACCTGAAGC CATGTCCATGGGCGTGTAGTTATATATATGAAGGTTGATTGGTTCCTATAGCCCTGAACG ATCAAGATGTCTGATTGACCGATCAGAGCCCGGTTAATCATCGGACTGGTCGTCGACTAA TCGTGATTTGTCGGCTGATCGCCCCTCTGGCGATCAGGAGCGATCAGCCGATCTGAAAAC ATTGCTCCAGTAGAGTGTGTAAAATAGGGGATGCGGAACTGTAGTCTGTAGATGACACCG TTTAACACTGTTTGCAGAGAGAAGTTTGAAATAGGGGATGAGATAGGAAATCTGCTGGAG ATAGCCTTACACCAGGTGGTATCAGTTGGGGGTGAATGACTTATTGCTCCTAGCAGACTC TCATACTTGTGTTCCAACTGTACACCATTACAAGAAAGAAAAATGCAGATTATGGAGGAA CGCTAATCTGTTTACAGTTCCGAAAGCTCCAATATGTGTGCGTGTGTGACATTGTAACCG AAATTTCTCATGTACTTCCTGTGCGTCCACAAATTTGTACATGAAGGGTTGGCAGTTGGC ACATGCTGATATCTCATATAGTGTTCATAGATTTTTACAGAAATACATATCTCATGTAGT CAGGTAACTAAAATAGGTCTTTTAAATAAAATTTGCTGGGACTAAAGTTTAGTCCTCATT TTAGGATGGTGAATCAAATACAAACAAGTGTTCACACATTACAGTAAGCCCACATATCAT AATCTTATGGTGACAATCACAACGTAACCTGAGTCTTTCTTGGCTTTCTTGTGCTCATTG TACTTTTCTTGCTTCTTGTTCCATGGCAAGCTATCAAATGACACCATAGGAATTATTGCA TTCTTAGCTTTTGCCTTTGATATTGAACTTCATGGGTGAGGGCGGTCAGCGAGGCTAGAC ATGGCGCAGCCCCAAGGCTGTCGTTCTGGCTTTAATCTTTACTAGAAAAAGGAAGCGCCC TATCGGGCGCTAAACACTTTATGCAGTAGGAGAATAAATTAAACCATATGTTACACCTTA TAGGACACATTTTAATGCGGCCGCAAAATTAGGCAAAGAAAGCCACAATGATTGTGGACC AACAAGCTTTAACAAGTAAAAATGATGTACATTGTCTCGACTACTAAACGATAGCTAAGC CACCGTAAGCTAAGTAAAAGCTCATATTCTTGTGGCTAATAAGAGATGCATGATCCAGAA ACAAAGTATATATTGTCCTAATTCAAGTAGCAGTTTGTGCCTTCTAAATGTAAAATGGAA CATTATGCAATAAAGCATACCTTCCTATACGCAGAACCAGTAGGGAACCATCCTTTCTTA GTTCTGCAATAAACTGCAATTGCAGATGTCACAACAAACTGGACATATCCAGTTAGGATT CTTCTTAACCTCTAACACACTCTCGCCATACCTGCATCCACTATACAGTGTCAATCCAGA AACTACTAACTGTCAAGAGAAAAGAAAACAGAGTTCAATTCACATTTACATGCATATTCA TCTCATCGCCATCGAAGAAGCCATCATTGTATTGTGAAGTAAGTTCAACTGGAAAGTTGA GTAGTGCATAGTTTTGATGAGATGCCCCATGATAGACAATCTATGAAGACTTTGTTGCCG ATAGAAAAGAACAAAATCCCCATCATTGAGATGCCTCTCCACCTAGGGAAATCTGACACA ATGAATCGAAGACATAAAAAAATCCAATGACATTGTGTAGAAAAACAGCAGCTTCTACAA CCAAAGTGAAGTTGATACTCACCTTGTAACCAAGCTCTAGATGTTGATCATTTCTTTTCT TCACATATTGAAGATCAAGCCTCTGACCATCGTCCATGATGATATATTTTGCACCGGTCT TCCCTGGGGGAGGGTGAGGCCCATATACGAAGGGTTCCTTCAACCTGAAATCATTGGATT TAGCTGCAAATGACCAGCAAAAGCACACTAAGTAAATAACATTTATCAATAAGAAAATTG GTTCACCTCTCATTATTATATGGATTGATAGTTTCAGGATATGTCAGGTTCAAAGCAGTA CAACATGGTATGCCAAACTCATCAATATTTATGTTTGGATCTAGTGTGTAAACTGTATAG GCCGAGAAATGAACATACTTGCCCATTAAGTTTCCTCTAATGCAGCCTTCTATAGCTTTC AGTCTGCTGCAAATTGATTCAATAGGTCTTCCAGAACGCTGTGTGGCCTGAGCATTTCAA CAAATAATTTCTCAATTGAGGGTCACTGTGTCCATCTGGCTGCAGTTTCCCCTCTCCATG GTCTCTGCATGCTCTATTTGAACCACCTATATTTGTCTCTACCAAAGAAGAAATAAATAA ATAAATGGATAGTCAATAGCTGTTATCCCTAGAAACATGTTCCTCACACACCGTAGACAA AACAAACCAGAATAACCTTTTAATGGGTCGTTCCTATTCAGTGCTTCGGTACTCATTTTT TCTTTCGAACAGCAGAAAATTTTAATTTTTTTATGGCAATGAAAAGAGACCACGAATGAC AGCTTTATCAAAATGTCTTGTCCATTAATGGACAGCTTTGAACCTTAATAGTGGATTGGC TAATTAACCAGTAGTCTACACTGATTATTCAACCAACAATGTAACAGCCTATTTGATTTA CATGTAGCCATTCATTCACTCTATTCGTAAAAACTATACACTAATATATGCACAATCCAA ATTTGCGCAGTCATATGTGAGCCATAAATATTGTGGAATCATAAATCTGTATTATAAAAC TGTGCAGTCATATGTGCACACAAGAATCCAAAACACGAAGACACCTCTCATATGACTACT TTTTCTCTGCATACGTGATAGAGACCCTCCATCTGTAATTATGGTGTAGTATTTCCATAT GGTATTAAAATATACAAGCATCAGTACTAATTTTATTTGATTGGATTAGATCAAGATTCT AATTATCTGTCTAGATTACTAATAGATTTTACTTTATTGGATTAGATTGGATTGGTTGGG GTGCAATTGCTGCAATCGGTTCTCTTAATTTGATGACTTCACTCGATTCGCTTAATTCTT TGCAGTAGATTAAAGGAGCCCTAGCTTTTGGAGGATGACCCAGCTGCCTTCAAAGTTCAA AAACAAAATGATGGTGGTGAGGGTGGACGAGAACCCTGCGCCGGATGGAGAGAACTCTCC CCTGGACGATGAGTACGTCTCGGCCGACGATGAGCACGTTGACAATGAAGACAAGGAGAC CGATAGCATCGGCGACTACGAAAACCCCAGTGGGGCGCCCCAGTTGAAGAAGGGTCCTTG GTCGCCCGAAGAGGATAAGCGTCTTAAAGACTACGTCGAGGTACACGGCGCGGGGAACTG GAATAAGGTGCAGAAGAATGCCATGCTCAACCGTTGTGGCAAGAGCTGCCGTCTCCGCTG GACCAACCACCTCAGGCCCGATCTTAAGAAGGATCCTTTCGACGCTGAGGAAGAGGAAAA GATAATCAAGCTTTACATCAGGTGGGGCCCCAAGTGGTCCATGATGGCCTCATATTTGCC TGGCCGCACAGATAATGAAATAAAAAACTTTTGGAATACCAGAAAAAGGAGAAAACAGAG ATGTGGTTCGCCTCTCCATCCAGAATATATGCTTTCTCAGCTTAGTCATAAAGACATGGA CTGTGAAACTCCTGGAGAATCACATGGCAAGAAACGGTCAAATGAGTGCTCAAAAGAAAA GGTTGTTGATGTGCAAGAACTTGTGGATGAGTTAATTGTATTTGAGCACCTTGACTATGG TAAGGATACAGTGTTTCCAACCAGACCTTTGAAATGCCATGCATCTACTAGTAGTGTGCA AATTCCTGGTGCCATTGAGAAAACCTTTTGTCCCACTGATTTGAACTATGTAATGACAAA GAATCAGTCGGTGCATGTTGGTAGTGCCATTGGCAGTGGCTATCCAGTATATGGTGGCAG ACTCTCTACTTCAGGGACCATATTCGGTTCCATTCAGACAGAGATCCCTTCGATCCAAAG TTCCAGCTATAGCCCAAGTAATGACTGGTTGGCTCAATGTCCTTCGGCTTGCATTGAGCA ACGGATTCCAATGGAATGCAATACAATATCTCAGTCAAAAGCTTACCTTATGATGCATTC TTCTTCAGCTTTCTGTGCCCCTGAACATGAGGCCTGTTCTGAAACTCAAGCTCCAGACTT ATGTTCAGGTTCAGATGCTGTTTTCGACCCCAGCCAGTGTTATCCAGTTGCTAGTTTTTC TGATCTTGGGATCTCGGATACACTACTAACAAAAGGTCTCTTGAATGATATAGCACTAGC AAGTTTGTTGAATGTTAATTTGAAGGACCAGTCACATATCAACAGGCAGGAACCTACCAA TGATACATCACTAGGAGGAGCAAGTTTCTTGAATGCTAATTTGAAGGACCAGTCACATCT CAACTGGCAGGAACATATGAATGAGACATCACCAGTAGCAGGTTTATTGAATGCTAATTT GGAGGAGCAGTCACATCTCAACTGGCAGGAACCTAAGAATGAGTCATCACCAGAAGCAGG TTTCTTGAATGCTAATTTGGAGGAGCAGTCACATCTCAACTGGCCCTTGCAGGAATGTGA GCCATGGATTGAGAGACAAATGTTTTGACCAATAGTTTGATCCTTGTTACAAGCCTGACT TCCCATGTTCCTGAGCAGCAGTTTCCTCTACTGCACAACCAGGGCCAGAGTGAGCAACAA CCAAGATATTCTTGTGAGCGTGATGGAAATTACATTTTAGTTCTCTGCCTTCGCTGTCTT AAGCTCTCTGAAGTATTGTCTTCGACTTTGCTGGGATGATGAGCTGCTGCCCCGAGACAA CAACAGTCAGCCAGACCAAAATCACTTAAATAGTTTTAACAATGTATTAAGTTTTGTCTT GTTACCTGCTGTCTGGCGTCTGCCATGTTTTGTCCACTGTTAAACTTGTCTAATAATACC CTTTTAGGGCTAATTTGGAAAGCCTCAATGTCTTAAGTTTTGTCTTGGT