Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000223_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg26:177561:180711:1 gene:Zm00001d000223 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase family protein
Sequence

ATGCCGATAGACATGCCGCGGGGTCTCCCCTTCGCCGTCGACACGTGGGGGTCCTCCTCC
CGAAGCCGGCGCCACCGCTTCCTTACCCACGCACACCGGGACCACCTCGTCGGCGCCGGT
GCGGACATCGATGGGGGAGGGATCGTCTACGCCACTCGCCTCACCTTGCACCTCGCACTT
CGCCACTTTCCCCAGTTGGGGAGTTGGGAGTTCGTGGAGATGGAGGTGGGAAGGACGTTG
GTGGTGGATGATCCCGTCGGCGCCTTCTCTGTCACCACGTACGACGCAAATCACTGCCCT
GGGGCAGTCATGTTCTTGTTTGAGGGTCAATTTGGTACCATACTTCACACAGGGGACTGT
CGGCTTACACCAGATTGCGTACAGAATTTGCCAATGAAGTACATAACAAAGAAAGGAAAC
GAGAACATTTGCCGACTTGACTTTGTATTCCTAGATTGCACCTTCTCCAAATGCTTCCTC
AAGCTACCGAGCAAGGACTCAGCAATCCGACAGGTTATATCTTGCATATGGAAACATCTG
CATGCACCATTTGTCTTCCTTGCTTGTGATCTGCTTGGGCATGAAGATATACTAGTTGAG
GTGTCAAGGACTTTCGGAACAAAAATTTACGTTGACCGGAAATTGGATTGTTTTAAAGCA
CTCTCACTGACAGCCCCTGAAATCATCACTGACGATTCATCTTCTCGCTTTCAGATGGTT
GGGTTCCACCAATTACATGATAGAGCAAGCAAAGAGCTTGCAGAGGCAAGGGCAAATCTC
CAACCTGAACCCTTATTTATTCGTCCATCAACACAATGGTATGCAACCTGTGCTCGAAGC
CCGAAACCCAGCCTAACAGAAGCTGAGCAGGATGAGCTTGGCATCTGGCATGTTTGTTTC
TCCATTCACTCCTCTCGTGATGAGTTGGAGCAAGCACTACAACTTCTCCAACCTCACTGG
GTTATTTCAACAACTCCCCCATGCTTTGCCATTGAGCTGAGCTATGTAAAGAAACATTGT
TTCAAGACCCGCTTAACAGCTGATGATCCACTCTGGAAAATATTCAGAGATCCTCTGGGA
AAGTCAGTGTCCTCCCCTTGTTCAGTGCTTGCGACACAGACAGATGAAAATAACTCAAAT
TTTGTTGTTGATGATGACCATTCTTCTTCCTCTAGCGATGGATGCACATACTTAAATGTA
ATAAGCACTCTTGAACTGAAATTTGTGCCACCTCAACCACCTGAAGAACCGGACATTACA
TTGTTTGGAAGAGCAAGGTTTGCCTCTCAAGCAATTGACTTTATGAAAGAAGATTACATT
GCCTTAGAAGAAGCCAGGGCATGTGCACCAACAGATTCGGTTCATGGCAGTAGTGAAGAA
GTCGAAACATATTCTGGAATGGATTTCGGTGTGAAACAACCACCAGCCTCCCAGCAGGAT
CTCATGGAAGTTGGAGATGATGTTTCTTTCAAAAAAGTTGGAGATGATGTGGATTCCTGT
AAGCATGAAGTAACCTCAACACAATTAGAAGGGTTTCGAGTCAAGTCATTACCTACTGTT
CAAAGCAATATGTTAGTGGTGTCTGATCAACTTGAAAGGTCAGAAGTTGTAGGAGAGTCA
AAATTATTGAAATCCACGGAAGACTTAAACCTTACCATTGTCAGAAGTGCAGAAAGAACT
GATTGTCAAAAGGAACCTTTGTGCTATATTGGATCATCGAAATGTTTGAATGCAAGTTTG
AAGAGGTTTTACAGGTCAAGGAATATCCCTGTTCCTAGACCTCTTCCATCGCTTGTCAAA
CTTATGGAGTCCACTAAACGGGTCAAAATACAACCAAATACTAATTATACTTTGTTGAAC
TCACGACACAGCTTACCCTAA

Peptide Sequence

PEP ID

Zm00001d000223_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg26:177561:180711:1 gene:Zm00001d000223 transcript:Zm00001d000223_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase family protein
Sequence

MPIDMPRGLPFAVDTWGSSSRSRRHRFLTHAHRDHLVGAGADIDGGGIVYATRLTLHLAL
RHFPQLGSWEFVEMEVGRTLVVDDPVGAFSVTTYDANHCPGAVMFLFEGQFGTILHTGDC
RLTPDCVQNLPMKYITKKGNENICRLDFVFLDCTFSKCFLKLPSKDSAIRQVISCIWKHL
HAPFVFLACDLLGHEDILVEVSRTFGTKIYVDRKLDCFKALSLTAPEIITDDSSSRFQMV
GFHQLHDRASKELAEARANLQPEPLFIRPSTQWYATCARSPKPSLTEAEQDELGIWHVCF
SIHSSRDELEQALQLLQPHWVISTTPPCFAIELSYVKKHCFKTRLTADDPLWKIFRDPLG
KSVSSPCSVLATQTDENNSNFVVDDDHSSSSSDGCTYLNVISTLELKFVPPQPPEEPDIT
LFGRARFASQAIDFMKEDYIALEEARACAPTDSVHGSSEEVETYSGMDFGVKQPPASQQD
LMEVGDDVSFKKVGDDVDSCKHEVTSTQLEGFRVKSLPTVQSNMLVVSDQLERSEVVGES
KLLKSTEDLNLTIVRSAERTDCQKEPLCYIGSSKCLNASLKRFYRSRNIPVPRPLPSLVK
LMESTKRVKIQPNTNYTLLNSRHSLP

Transcript Sequence

Transcript ID

Zm00001d000223_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg26:177561:180711:1 gene:Zm00001d000223 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase family protein
Sequence

AGTACCCTACTGCTTCCATCAAGGAGAACTGCAACTGGAAGCGGGTGCGAGCGACTGCGA
TCCGGACGAGGGGAGGGACCTGTCCGTAATTTCGGAAAGGAGCCTGGGGGAGAATGCCGA
TAGACATGCCGCGGGGTCTCCCCTTCGCCGTCGACACGTGGGGGTCCTCCTCCCGAAGCC
GGCGCCACCGCTTCCTTACCCACGCACACCGGGACCACCTCGTCGGCGCCGGTGCGGACA
TCGATGGGGGAGGGATCGTCTACGCCACTCGCCTCACCTTGCACCTCGCACTTCGCCACT
TTCCCCAGTTGGGGAGTTGGGAGTTCGTGGAGATGGAGGTGGGAAGGACGTTGGTGGTGG
ATGATCCCGTCGGCGCCTTCTCTGTCACCACGTACGACGCAAATCACTGCCCTGGGGCAG
TCATGTTCTTGTTTGAGGGTCAATTTGGTACCATACTTCACACAGGGGACTGTCGGCTTA
CACCAGATTGCGTACAGAATTTGCCAATGAAGTACATAACAAAGAAAGGAAACGAGAACA
TTTGCCGACTTGACTTTGTATTCCTAGATTGCACCTTCTCCAAATGCTTCCTCAAGCTAC
CGAGCAAGGACTCAGCAATCCGACAGGTTATATCTTGCATATGGAAACATCTGCATGCAC
CATTTGTCTTCCTTGCTTGTGATCTGCTTGGGCATGAAGATATACTAGTTGAGGTGTCAA
GGACTTTCGGAACAAAAATTTACGTTGACCGGAAATTGGATTGTTTTAAAGCACTCTCAC
TGACAGCCCCTGAAATCATCACTGACGATTCATCTTCTCGCTTTCAGATGGTTGGGTTCC
ACCAATTACATGATAGAGCAAGCAAAGAGCTTGCAGAGGCAAGGGCAAATCTCCAACCTG
AACCCTTATTTATTCGTCCATCAACACAATGGTATGCAACCTGTGCTCGAAGCCCGAAAC
CCAGCCTAACAGAAGCTGAGCAGGATGAGCTTGGCATCTGGCATGTTTGTTTCTCCATTC
ACTCCTCTCGTGATGAGTTGGAGCAAGCACTACAACTTCTCCAACCTCACTGGGTTATTT
CAACAACTCCCCCATGCTTTGCCATTGAGCTGAGCTATGTAAAGAAACATTGTTTCAAGA
CCCGCTTAACAGCTGATGATCCACTCTGGAAAATATTCAGAGATCCTCTGGGAAAGTCAG
TGTCCTCCCCTTGTTCAGTGCTTGCGACACAGACAGATGAAAATAACTCAAATTTTGTTG
TTGATGATGACCATTCTTCTTCCTCTAGCGATGGATGCACATACTTAAATGTAATAAGCA
CTCTTGAACTGAAATTTGTGCCACCTCAACCACCTGAAGAACCGGACATTACATTGTTTG
GAAGAGCAAGGTTTGCCTCTCAAGCAATTGACTTTATGAAAGAAGATTACATTGCCTTAG
AAGAAGCCAGGGCATGTGCACCAACAGATTCGGTTCATGGCAGTAGTGAAGAAGTCGAAA
CATATTCTGGAATGGATTTCGGTGTGAAACAACCACCAGCCTCCCAGCAGGATCTCATGG
AAGTTGGAGATGATGTTTCTTTCAAAAAAGTTGGAGATGATGTGGATTCCTGTAAGCATG
AAGTAACCTCAACACAATTAGAAGGGTTTCGAGTCAAGTCATTACCTACTGTTCAAAGCA
ATATGTTAGTGGTGTCTGATCAACTTGAAAGGTCAGAAGTTGTAGGAGAGTCAAAATTAT
TGAAATCCACGGAAGACTTAAACCTTACCATTGTCAGAAGTGCAGAAAGAACTGATTGTC
AAAAGGAACCTTTGTGCTATATTGGATCATCGAAATGTTTGAATGCAAGTTTGAAGAGGT
TTTACAGGTCAAGGAATATCCCTGTTCCTAGACCTCTTCCATCGCTTGTCAAACTTATGG
AGTCCACTAAACGGGTCAAAATACAACCAAATACTAATTATACTTTGTTGAACTCACGAC
ACAGCTTACCCTAATGAATGATTGAGCTTATACTTGGCATATTATGATAGCCAAAATTTT
CAGATTTATGAGTATATGAATGGATTATTTCTGAAGAGGACACCTGTATATTGGTTATTG
TGATAACCAAAATACTCGGATTCTATTGGGTATACAGGTATACTTGGACTGGTTCCGAAG
AAGATACCTGTTTAGTATTGATCCAGATCCACACTTATACAGGAGCTTTGTACGATTCTC
AAACTGTTGTACAGAAAATTGATGTAATTACATGATGACTCTATTGGATAATCCGAAGTG
TATTATTCTTCTGCAATA