Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000205_T004
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg129:44783:52582:-1 gene:Zm00001d000205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxypeptidase SOL1
Sequence

ATGGCATCTGTGTATAGTCGGTCTCACTATAACATGTCTTTGAGCAAAGAATTTGAAGGA
GGGATAACAAATGGAGCATTCTGGTACCCAATATATGGTGGTATGCAGGACTGGAACTAT
ATACATGGAGGCTGCTTTGAGTTAACTCTGGAGATTAGTGACACAAAGTGGCCAAAAGCA
GATGAGCTTCCTATCATCTGGGAACACAATAGGATGAGTATGCTCAATCTTCTAGCAAGC
CTAATAAAGTCAGGGGTTCATGGAAGGATATTTGCAGCAGATACGGGCAGGCCTGTACCC
GGCTCAGTGATGATAAAGGGCATTGATTCCAAGGTAAGCGCGAGCAGCACTTTTGGAGAT
TACCATCGAATTGTTGCGCCTGGTGAGACATATGAAGTGGTGGCATCGATGCGAGGCTTC
CGGCAAAAATCTACACGCATCAGGCTGGAGCAGGAAGCCGTCAGCCTGGATTTCATCCTG
GACCCGGATGGAGCCGATGGGCAGACGAAGCTGCTGCCCCGTAGTAACGACCGGGGCTGC
CGCTGCGACAACGACAACGCCGCCAAGCCGTTCCATGTCCACGAAGCTCACCTCTGGTTG
TACCTCCTTATCGTGTCCGTTCTCCTGGCCCTCTACGTAGTCTTCAAGAGGAAAACGGTG
CCGAGGCTGCTGGCGTATAGACACTCATCGTCACTCAGACGGCCTGTTGCTGTATAA

Peptide Sequence

PEP ID

Zm00001d000205_P004
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg129:44783:52582:-1 gene:Zm00001d000205 transcript:Zm00001d000205_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxypeptidase SOL1
Sequence

MASVYSRSHYNMSLSKEFEGGITNGAFWYPIYGGMQDWNYIHGGCFELTLEISDTKWPKA
DELPIIWEHNRMSMLNLLASLIKSGVHGRIFAADTGRPVPGSVMIKGIDSKVSASSTFGD
YHRIVAPGETYEVVASMRGFRQKSTRIRLEQEAVSLDFILDPDGADGQTKLLPRSNDRGC
RCDNDNAAKPFHVHEAHLWLYLLIVSVLLALYVVFKRKTVPRLLAYRHSSSLRRPVAV

Transcript Sequence

Transcript ID

Zm00001d000205_T004
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg129:44783:52582:-1 gene:Zm00001d000205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxypeptidase SOL1
Sequence

AGTCGATGTCGATCCCTCTCCCGAACGAACCAGTCAAACACACACCGGCCTCGCAGTCGC
AGCCTCGCTCCGGAGGCGGAGCGCCGGAGCCCCGCCCACCTCCCCTAAACGGCCAGGGCC
TGACCACCCCCACCTCAGTCCCTCTCCTGTGGGCGGCGTCCTCCCGCGCCCATGGGGATC
TCGCACCTCCAGCCCGTCCTCCTCCTCCTCATGCTCCGGGCTCTCGCGTCGCTTCCCACG
CAGGCCGCCGCGAGAGGCGGCCACGATCCGTCAGATGATGGAGCCCACGGGCCATTTTCA
CGTAAACTTCTTGAAGATAAGCCTCAGATCACAGAAGAAATGGTCCGTGGATATATGAGC
AACACTGAGCTTGAGACTGCTGTACATGCCTTTGGAAGTCGTTGTTCCAATATCTCCAGG
GTGTACAGGTACACGATGTATAATGTTTTACTTCTGTGATAATTACATTTGGAGCTTCTA
AACAAACTTTTAAGACCATCAGTTTTTAAGGACATGTAAATGACTGTGTCATTGGTGGGT
AGTACCGTAGTAATATAAGGTCAGGAGCGACTGCGTCTTTGACAGACAAAGGCCCAGCAT
GGACAGCATCGTCATGAGAGCGAGAGAGGAGAGGGAGCTTTGGGAGATGGCTGGAGGCTG
GAGCTAAGAGCATGTCTCTCCTTATGGCTCCGACTCCAGGGTTGTAGGGCCCCCTTAGTA
GCGATGTGGTCACCATTATTTGTTTAGTCGTATGAGGTATGACCCCCCCTTTTTTGTATT
CTTGTTTTTGGCCATCGTAAGTGGTTTTATCTTGTAACGGCCGGCTTGGACCTTAACCAC
TTTCTTCTTAATATAATGACGCGCAGCTCTCCTGTGCTTCCGAGGAAAAAAAGGATTTAA
AATCATTATCAACCATGAGAGAAACAACATTGCATGCAGTCATGTTGATGGGTAACACCG
TAACAGCAAATGGATAAAATGAAACATGTATCTTTTTGAAAAGAAAACCAATCATGAAGC
GCCAACTTAGGGCTTGTTCGGTTAGAGTGAGATTGGGTGGGTTTAAATCCCAAGCAAGTC
AAAGTTCTTCTAAATTTTTTCCAATCCCATCCAATCCATGTATAATGTGAATAACCGAAC
AAGGCCTTATAGCATAATTATATCCATAAGGTACATGTATTAATTCTGTTTTACTTCAGA
TTGTTTTTTGAGGAGAAAAATGTAGGTTTTACTTCAGATTGTTGAAATGTTCCATGTTCA
TTGGTCATGATTAGCAATTTTAAGCATTTCCTGAGTAACAGAATATTTTGGTTTCAATCT
CTTTATTCTGTTGGTTTGTTATACAACTTCTGTACTGTCCTTGGATATCTCATTTTTTAA
GTGCACTGCTTCTTTCTTTATTTTGTGCCCTCCTGTTTTCTCATATGTCCACACTTCACT
TACATTTTATTTCTTCTCTCTTTGAGGGATAACACAAACCTGCTATCAGCATTGGAAAGA
GTGTGAATCATTTTCCATTGTGGGTGATTGAAATATCAGACAAGCCCAGGCAAAGGGAAT
CTGAACCAGCATTCAAGTTCATTGGAAATGTTCATGGTGATGAGCCTGTTGGAAGAGAGG
TTCTTATGCATCTTGCAAATTGGCTGTGTGATAACTATCTGAAAGATTCACTGGCAACTC
TCATTGTTGAGAACATGCACCTTCATATACTTCCGACGATGAACCCTGATGGGTTTGCTC
TTAGATGGCGTGGTAATGCAAACAATATTGATCTCAACAGGGATTTTCCTGACCAATTCT
TCCCCGTTAACAACGATATTGACTACAGACAGCCTGAAACTAGAGCCATTATGAATTGGG
TAAAGCAAGAACACTTCACGGCTTCTGCTAGCTTGCATGGGGGGCTCTTGTTGCCAACTA
TCCATGGGATGGAACTAGAGACACAAGCAAACACTACTACGGATGTCCTGACGATAAGAC
ATTCCAGCACATGGCATCTGTGTATAGTCGGTCTCACTATAACATGTCTTTGAGCAAAGA
ATTTGAAGGAGGGATAACAAATGGAGCATTCTGGTACCCAATATATGGTGGTATGCAGGA
CTGGAACTATATACATGGAGGCTGCTTTGAGTTAACTCTGGAGATTAGTGACACAAAGTG
GCCAAAAGCAGATGAGCTTCCTATCATCTGGGAACACAATAGGATGAGTATGCTCAATCT
TCTAGCAAGCCTAATAAAGTCAGGGGTTCATGGAAGGATATTTGCAGCAGATACGGGCAG
GCCTGTACCCGGCTCAGTGATGATAAAGGGCATTGATTCCAAGGTAAGCGCGAGCAGCAC
TTTTGGAGATTACCATCGAATTGTTGCGCCTGGTGAGACATATGAAGTGGTGGCATCGAT
GCGAGGCTTCCGGCAAAAATCTACACGCATCAGGCTGGAGCAGGAAGCCGTCAGCCTGGA
TTTCATCCTGGACCCGGATGGAGCCGATGGGCAGACGAAGCTGCTGCCCCGTAGTAACGA
CCGGGGCTGCCGCTGCGACAACGACAACGCCGCCAAGCCGTTCCATGTCCACGAAGCTCA
CCTCTGGTTGTACCTCCTTATCGTGTCCGTTCTCCTGGCCCTCTACGTAGTCTTCAAGAG
GAAAACGGTGCCGAGGCTGCTGGCGTATAGACACTCATCGTCACTCAGACGGCCTGTTGC
TGTATAAGAGGAACTAATTTTGTGGTCTAGGCGGATAGTTTTGTACTACCTCTGTTCTCG
AATAGTTGTTGTCCGCTAGTTAATTTTTATAGCTAGTTCATTTTTATACTAAAATGTGAC
AAATAGAAAAGAACGGAGGGAAGGAGCAACTGAAGTTAGTCTTCTCTTTGCCAAAACGGT
CGGTTGCTGTATAAGTTGAAGGATGGGTAATGTACCATGGAAATGACATTTTTTTTGAAT
CAATGAAATACATGTTGCGTTG