Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000202_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg6:202993:206597:-1 gene:Zm00001d000202 gene_biotype:protein_coding transcript_biotype:protein_coding description:Charged multivesicular body protein 2a

Sequence

ATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAACGTGAA
ATGGCGGTCGCCACGCGGGGAGTTGAGAGAGAGATTGGTTCCCTGCAAATGGAGGAGAAA
AAGCTGGTTGCAGAGATAAAGAAGACTGCCAAGACTGGAAATGAGGCTGCAACCAAAATA
TTAGCTCGGCAACTTGTCAGGCTGAGGCAACAAATCCTCAATTTGCAAGGCACACGGGCA
CAGATTCGTGGAGTAGCTACTCACACACAGGCAATGTATGCTGGCACTTCAATCTCTGCT
GGAATGAAAGGTGCAAGCAAAGCTATGTCAGCAATGAACAAGCAAATGGAACCGGCGAAA
CAGATAAAGGTCATGAAAGAATTCCAGAAACAATCAACACAGTTGGACATGACGCTTGAG
ATGATGTCTGATGCTATTGATGAAACACTTGACAAAGATGAGGCGGAGGAGGAAACAGAA
GAGCTTACAAACCAGGTCCTTGACGAGATTGGCGTCGATGTGGCTTCTCAGCTCTCTTCG
GCTCCTAAAGGGCGCATCGGAGCTACTAACAAGAAAGTCGATAATGGTCAAGCACGTCCT
GCAAGGAACGTGGCGGCTCCTGCTCTAGAACCCTCCTCTGCTGAAGTTGAGGATCTGGAG
AGGCGACTGGCATCTCTGCGCCGTACCTGA

Peptide Sequence

PEP ID

Zm00001d000202_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg6:202993:206597:-1 gene:Zm00001d000202 transcript:Zm00001d000202_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Charged multivesicular body protein 2a

Sequence

MNIFKKKVDPKEALRTSKREMAVATRGVEREIGSLQMEEKKLVAEIKKTAKTGNEAATKI
LARQLVRLRQQILNLQGTRAQIRGVATHTQAMYAGTSISAGMKGASKAMSAMNKQMEPAK
QIKVMKEFQKQSTQLDMTLEMMSDAIDETLDKDEAEEETEELTNQVLDEIGVDVASQLSS
APKGRIGATNKKVDNGQARPARNVAAPALEPSSAEVEDLERRLASLRRT

Transcript Sequence

Transcript ID

Zm00001d000202_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg6:202993:206597:-1 gene:Zm00001d000202 gene_biotype:protein_coding transcript_biotype:protein_coding description:Charged multivesicular body protein 2a

Sequence

CAAGTGAAAATACCCGTTGGGCTCGGCTCGCGCGGCGCCGTCCTCTCCCACTCTCTACGC
ACGAACACAGCACGCGCCGCACCCCGCTCTCTCTCTCCTGCGTTCCCATCTGCGGCGGGG
AGTGAGCACATTGAGGACGGTCTACTCCTCGTTCGCGTGCGGTTCGTCCCGAGCGATCCG
GCAACCATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAA
CGTGAAATGGCGGTCGCCACGCGGGGAGTTGAGAGAGAGATTGGTTCCCTGCAAATGGAG
GAGAAAAAGCTGGTTGCAGAGATAAAGAAGACTGCCAAGACTGGAAATGAGGCTGCAACC
AAAATATTAGCTCGGCAACTTGTCAGGCTGAGGCAACAAATCCTCAATTTGCAAGGCACA
CGGGCACAGATTCGTGGAGTAGCTACTCACACACAGGCAATGTATGCTGGCACTTCAATC
TCTGCTGGAATGAAAGGTGCAAGCAAAGCTATGTCAGCAATGAACAAGCAAATGGAACCG
GCGAAACAGATAAAGGTCATGAAAGAATTCCAGAAACAATCAACACAGTTGGACATGACG
CTTGAGATGATGTCTGATGCTATTGATGAAACACTTGACAAAGATGAGGCGGAGGAGGAA
ACAGAAGAGCTTACAAACCAGGTCCTTGACGAGATTGGCGTCGATGTGGCTTCTCAGCTC
TCTTCGGCTCCTAAAGGGCGCATCGGAGCTACTAACAAGAAAGTCGATAATGGTCAAGCA
CGTCCTGCAAGGAACGTGGCGGCTCCTGCTCTAGAACCCTCCTCTGCTGAAGTTGAGGAT
CTGGAGAGGCGACTGGCATCTCTGCGCCGTACCTGAGTCTGAGCTGTTGAAGAAAGAACT
TGTTTGTAATACTAGCAGTTATTCATCTATATATGTAAAGTTGGTTTATATGTGTAGGGA
AAACAGCGAGCTGCACATGATACGGTTGAACCTACTTAATGTTTTATTTAATTTGGAAGT
TGACTG