Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000179_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg181:214703:215548:-1 gene:Zm00001d000179 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 1 description: AP2-EREBP-transcription factor 1
Sequence

ATGGCTCAAGAGCTCCACGAAACGTCCTCTTGCTCTGCCACCACCACCTCGTCGTGCACC
ACATCCTGCTGCTCGTCCACTGTCACAGACTCGTCCTCTTCGCCCCCGTCACCGGCGGCG
GCCAATGCCGCGCCCGCGACACGGAAGCGGCAGGCGTTGGAGGCCGAGGCCGAGGCCGAG
GCGGGCGGTGAGGAGGAGGAGGAGGAGGAGGAAGGCTGTGCTGGTAATAAGGCGGCGCCG
GCCAAGAAGCGACCGCGGGGCAGCGAGGGGAAGCACCCGACGTTCCGCGGCGTGCGGATG
CGGGCGTGGGGCAAGTGGGTGTCGGAGATCCGCGAGCCGCGCAAGAAGTCGCGCATATGG
CTCGGCACGTTCCCCACCGCCGAGATGGCCGCGCGCGCCCACGACGTCGCGGCGCTCGCC
ATCAAGGGCCGCGCCGCGCACCTCAACTTCCCGGACCTCGCCGGCGCGCTCCCGCGCGCC
GCGTCCGCGGCGCCCAAGGACGTCCAGGCAGCCGCCGCATTGGCCGCTGCGTTCACGTCG
CCGTCATCGGAGCCCGGCGCCGGCGCGCACGAGGAGCCCGCTGCCAAGGACGGCGCCGCG
CCCGAGGAGGCAGCCGCCGACGCACAGGCACCAGTACCAGTAGCACTACCACCGCCGGCG
GCCTCTCGGCCAGGGACGCCGTCGAGCGGCGTGGAGGACGAGCGGCAGCTGTTCGACCTG
CCGGACCTGCTCCTCGACATCCGGGACGGGTTCGGGCGCTTCCCGCCGATGTGGGCCCCG
CTCACTGACGTGGAGGAGGTGGTCAATGCGGAGCTGCGCCTCGAGGAGCCGCTGCTTTGG
GAGTAG

Peptide Sequence

PEP ID

Zm00001d000179_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg181:214703:215548:-1 gene:Zm00001d000179 transcript:Zm00001d000179_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 1 description: AP2-EREBP-transcription factor 1
Sequence

MAQELHETSSCSATTTSSCTTSCCSSTVTDSSSSPPSPAAANAAPATRKRQALEAEAEAE
AGGEEEEEEEEGCAGNKAAPAKKRPRGSEGKHPTFRGVRMRAWGKWVSEIREPRKKSRIW
LGTFPTAEMAARAHDVAALAIKGRAAHLNFPDLAGALPRAASAAPKDVQAAAALAAAFTS
PSSEPGAGAHEEPAAKDGAAPEEAAADAQAPVPVALPPPAASRPGTPSSGVEDERQLFDL
PDLLLDIRDGFGRFPPMWAPLTDVEEVVNAELRLEEPLLWE

Transcript Sequence

Transcript ID

Zm00001d000179_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg181:214703:215548:-1 gene:Zm00001d000179 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 1 description: AP2-EREBP-transcription factor 1
Sequence

ATGGCTCAAGAGCTCCACGAAACGTCCTCTTGCTCTGCCACCACCACCTCGTCGTGCACC
ACATCCTGCTGCTCGTCCACTGTCACAGACTCGTCCTCTTCGCCCCCGTCACCGGCGGCG
GCCAATGCCGCGCCCGCGACACGGAAGCGGCAGGCGTTGGAGGCCGAGGCCGAGGCCGAG
GCGGGCGGTGAGGAGGAGGAGGAGGAGGAGGAAGGCTGTGCTGGTAATAAGGCGGCGCCG
GCCAAGAAGCGACCGCGGGGCAGCGAGGGGAAGCACCCGACGTTCCGCGGCGTGCGGATG
CGGGCGTGGGGCAAGTGGGTGTCGGAGATCCGCGAGCCGCGCAAGAAGTCGCGCATATGG
CTCGGCACGTTCCCCACCGCCGAGATGGCCGCGCGCGCCCACGACGTCGCGGCGCTCGCC
ATCAAGGGCCGCGCCGCGCACCTCAACTTCCCGGACCTCGCCGGCGCGCTCCCGCGCGCC
GCGTCCGCGGCGCCCAAGGACGTCCAGGCAGCCGCCGCATTGGCCGCTGCGTTCACGTCG
CCGTCATCGGAGCCCGGCGCCGGCGCGCACGAGGAGCCCGCTGCCAAGGACGGCGCCGCG
CCCGAGGAGGCAGCCGCCGACGCACAGGCACCAGTACCAGTAGCACTACCACCGCCGGCG
GCCTCTCGGCCAGGGACGCCGTCGAGCGGCGTGGAGGACGAGCGGCAGCTGTTCGACCTG
CCGGACCTGCTCCTCGACATCCGGGACGGGTTCGGGCGCTTCCCGCCGATGTGGGCCCCG
CTCACTGACGTGGAGGAGGTGGTCAATGCGGAGCTGCGCCTCGAGGAGCCGCTGCTTTGG
GAGTAG