Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d000178_T001
CDS Infomation	cds contig:B73_RefGen_v4:B73V4_ctg181:132473:138116:-1 gene:Zm00001d000178 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy3 description:Autophagy-related protein 3
Sequence	ATGCAGGTGAAGCAGAAGGTCTACGAGTTCTACAAAGGCACGGTGGAGCGGGTCACGGCC CCGCGCACCGTCTCCGCGTTCCTCGAGAAGGGCGTCCTCTCCGTCCCCGAGTTCATTCTC GCCGGCGACAACCTCGTCGCCAAGTGCCCCACCTGGTCCTGGGAAGCGGGCGATCCAAGC AAGAGGAAGCCGTATCTCCCCGCCAATAAGCAGTTCCTCGTCACCCGTAATGTGCCCTGT TTAAGACGTGCCATCTCGGTTGAGGAAGAGTATGATGCAGCAGGAGCAGAGGTGGTTCTC GATGAGGATGGCGAAGGCTGGCTTGCAACACATGGAGTGCAAGGTCAATATCCTTATAAG TGCTGTTTGGTTTTCCACTCTGAATTATATGATCTTAACTGTTTTTTTTGGGGTCCGTTG CTCATGTTAGCATCAAAGACAGAAGAGGAGGAAGACATTCCCTCTATGGACACCTTGGAC ATAGGGAGATCTGATGGAATAAAGTCTATCCCCTCTTACTTTAGCGGTGGCAAGGATGAA GAGGAGGAAGATATACCTGACATGGATACTTATGAAGACACAGGGGATAATTTGGCTGCT GCTGAACCATCATACTTTATCGCAGAAGAACCAGAAGATGACAACATTCTTCATACCAGA ACATATGATGTTAGCATAACGTATGACAAGTACTACCAAACTCCACGTGTCTGGCTAACT GGATATGACGAGTCAAGAATGCCATTAATGCCTGAACTTGTGTTTGAAGACATCAGCCAA GACCACGCACGAAAAACGGTGACTATTGAGGACCATCCTCACTTATTGGCTGGGAAGCAT GCATCAGTGCACCCATGCAAACATGCAGCTGTGATGAAAAAGATCATCGACGTTCCAATG TCGGGGGGAGTGGAACCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAATTCATAGCG ACAGTCATACCGACTATTGAGTACGATTATACAATGGACGTCGACCTTGGCAGTACAAGC TGA

Peptide Sequence

PEP ID	Zm00001d000178_P001
PEP Infomation	pep contig:B73_RefGen_v4:B73V4_ctg181:132473:138116:-1 gene:Zm00001d000178 transcript:Zm00001d000178_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy3 description:Autophagy-related protein 3
Sequence	MQVKQKVYEFYKGTVERVTAPRTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPS KRKPYLPANKQFLVTRNVPCLRRAISVEEEYDAAGAEVVLDEDGEGWLATHGVQGQYPYK CCLVFHSELYDLNCFFWGPLLMLASKTEEEEDIPSMDTLDIGRSDGIKSIPSYFSGGKDE EEEDIPDMDTYEDTGDNLAAAEPSYFIAEEPEDDNILHTRTYDVSITYDKYYQTPRVWLT GYDESRMPLMPELVFEDISQDHARKTVTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVPM SGGVEPEVDKYLFIFLKFIATVIPTIEYDYTMDVDLGSTS

Transcript Sequence

Transcript ID	Zm00001d000178_T001
Transcript Infomation	cdna contig:B73_RefGen_v4:B73V4_ctg181:132473:138116:-1 gene:Zm00001d000178 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy3 description:Autophagy-related protein 3
Sequence	GTAGAACACAGCATCTCCGGTAGCGTCACCGTAGGCCTCGCAAGTAAACTGACCTGCCTT CTCCGCTTTCCCCTCCGTCTCCGTCGGGAGTCGAGACAAAGGGAGCCAGAGTTAGTCCCG GCGCCGTGTCGCGAGCGGAAGGAGAAGGACTGAAGGAGGCGACGATGCAGGTGAAGCAGA AGGTCTACGAGTTCTACAAAGGCACGGTGGAGCGGGTCACGGCCCCGCGCACCGTCTCCG CGTTCCTCGAGAAGGGCGTCCTCTCCGTCCCCGAGTTCATTCTCGCCGGCGACAACCTCG TCGCCAAGTGCCCCACCTGGTCCTGGGAAGCGGGCGATCCAAGCAAGAGGAAGCCGTATC TCCCCGCCAATAAGCAGTTCCTCGTCACCCGTAATGTGCCCTGTTTAAGACGTGCCATCT CGGTTGAGGAAGAGTATGATGCAGCAGGAGCAGAGGTGGTTCTCGATGAGGATGGCGAAG GCTGGCTTGCAACACATGGAGTGCAAGGTCAATATCCTTATAAGTGCTGTTTGGTTTTCC ACTCTGAATTATATGATCTTAACTGTTTTTTTTGGGGTCCGTTGCTCATGTTAGCATCAA AGACAGAAGAGGAGGAAGACATTCCCTCTATGGACACCTTGGACATAGGGAGATCTGATG GAATAAAGTCTATCCCCTCTTACTTTAGCGGTGGCAAGGATGAAGAGGAGGAAGATATAC CTGACATGGATACTTATGAAGACACAGGGGATAATTTGGCTGCTGCTGAACCATCATACT TTATCGCAGAAGAACCAGAAGATGACAACATTCTTCATACCAGAACATATGATGTTAGCA TAACGTATGACAAGTACTACCAAACTCCACGTGTCTGGCTAACTGGATATGACGAGTCAA GAATGCCATTAATGCCTGAACTTGTGTTTGAAGACATCAGCCAAGACCACGCACGAAAAA CGGTGACTATTGAGGACCATCCTCACTTATTGGCTGGGAAGCATGCATCAGTGCACCCAT GCAAACATGCAGCTGTGATGAAAAAGATCATCGACGTTCCAATGTCGGGGGGAGTGGAAC CAGAAGTTGACAAGTACCTTTTCATATTTTTGAAATTCATAGCGACAGTCATACCGACTA TTGAGTACGATTATACAATGGACGTCGACCTTGGCAGTACAAGCTGATTATTGGTTGGCT TGAAGCTTGTCACTTGTCTCGGGAAAAGGAAGCACCCTACCAGAAGGCGCAGGAAGAAGG CTGAATTGCGTGTTTGTGGTTGAACATTTGTGCATATGTGCTTGTTCCTTGGATCGGTTT GCATTTGTGAACAAACTCTGAAAAGCTCAAAGGCAAGACCCATCTTGTACATTCTGTGAC GCTGTCAGCTTGTGAATCCATTCGTTAATATAAATCTCAACAACCCGTTCGGCGTGCGTG GG