Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000175_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg181:42145:44112:1 gene:Zm00001d000175 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATGGAGAAAGGCTGGAAGGCGAGAGACGCTGCTGGTGCTTTCATGATGGACTTG
GAGCTGGTGGCCGAGGAAACCGACGACGCGGTGCCGTCGATACCGCCACCGCAGACGCCG
CTGGAGCCCATGGAGTACCTCTCCCGGTCGTGGAGCGTGTCGGCGTCGGAGATTTCCAAG
ATTCTCCTCGGTGGAGGCAAGAAGAGCAGCGTTGCGGCGGCGAGCCGGCTTCCGGAGGTG
ACCATACCGGAGCAGTCTGCGCTCGCCACCACGTCCTCCGTCGTTCCTCTACCGTGTCAT
CAGCAGAACAGAGCCGCAAGAAGGTCTTCCACGAGCAGCGGCCACCACCACCAGTCGATC
GGCAAGTGGTTCCAGGTCCACCACAGGGAAACACGCCGGGCGAAGCAGAGCAGCAAGGAG
AAGCAGCGCGCCGAGAAGGCCCACGTGCACGCCATGGTGTCCGTGGCCCGGGTCGCTGCC
GCCGTCGCCGCCGTCGCGTCGGCCACGAGCTCCAACGCCCAGGCTACCACTACCAAGATG
GCGACAGCCATGGCGTCGGCCACCGAGCTGCTGGCCTCCCACTGCGTCGAGGCAGCTCAG
CACGCGGGGGCGCGCCACGACCAGGTGGCCGCCGCCGTGCAGGCCGCGGTTGGCGTCAGA
AGCCCCGGCGATCTGATGACGCTCACGGCGGCCGCAGCGACCGCTCTGCGAGGAGCGGCG
ACACTGAGGCAGAGGGCGCAGCGAGAGACGAGGAGCAACGCGAGCATCCTGCTCCCGTAC
GAGAAAGCCGCGAATTCGTGGAGCCCGGACATCTGGTGCAAGGAGGGGGCGCTGCTGAAA
CGCGCAAGGAAAGGTAAATTCGTATCTCGGAACATGCATCCAGCTACGGAAACCAGGATC
GAGAAGCACAGAACTACAGAAGCATGGTCGAAAAAAGCTTAG

Peptide Sequence

PEP ID

Zm00001d000175_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg181:42145:44112:1 gene:Zm00001d000175 transcript:Zm00001d000175_T002 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAMEKGWKARDAAGAFMMDLELVAEETDDAVPSIPPPQTPLEPMEYLSRSWSVSASEISK
ILLGGGKKSSVAAASRLPEVTIPEQSALATTSSVVPLPCHQQNRAARRSSTSSGHHHQSI
GKWFQVHHRETRRAKQSSKEKQRAEKAHVHAMVSVARVAAAVAAVASATSSNAQATTTKM
ATAMASATELLASHCVEAAQHAGARHDQVAAAVQAAVGVRSPGDLMTLTAAAATALRGAA
TLRQRAQRETRSNASILLPYEKAANSWSPDIWCKEGALLKRARKGKFVSRNMHPATETRI
EKHRTTEAWSKKA

Transcript Sequence

Transcript ID

Zm00001d000175_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg181:42145:44112:1 gene:Zm00001d000175 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAGAACCATCACTAGTGAGTAGTAGTGAGTGACCTGCAAAGACACGCGAGGCACGCAGA
GCTGGAGCAGCTGATCTGAGAACCAGGAATTAGGATGGCGATGGAGAAAGGCTGGAAGGC
GAGAGACGCTGCTGGTGCTTTCATGATGGACTTGGAGCTGGTGGCCGAGGAAACCGACGA
CGCGGTGCCGTCGATACCGCCACCGCAGACGCCGCTGGAGCCCATGGAGTACCTCTCCCG
GTCGTGGAGCGTGTCGGCGTCGGAGATTTCCAAGATTCTCCTCGGTGGAGGCAAGAAGAG
CAGCGTTGCGGCGGCGAGCCGGCTTCCGGAGGTGACCATACCGGAGCAGTCTGCGCTCGC
CACCACGTCCTCCGTCGTTCCTCTACCGTGTCATCAGCAGAACAGAGCCGCAAGAAGGTC
TTCCACGAGCAGCGGCCACCACCACCAGTCGATCGGCAAGTGGTTCCAGGTCCACCACAG
GGAAACACGCCGGGCGAAGCAGAGCAGCAAGGAGAAGCAGCGCGCCGAGAAGGCCCACGT
GCACGCCATGGTGTCCGTGGCCCGGGTCGCTGCCGCCGTCGCCGCCGTCGCGTCGGCCAC
GAGCTCCAACGCCCAGGCTACCACTACCAAGATGGCGACAGCCATGGCGTCGGCCACCGA
GCTGCTGGCCTCCCACTGCGTCGAGGCAGCTCAGCACGCGGGGGCGCGCCACGACCAGGT
GGCCGCCGCCGTGCAGGCCGCGGTTGGCGTCAGAAGCCCCGGCGATCTGATGACGCTCAC
GGCGGCCGCAGCGACCGCTCTGCGAGGAGCGGCGACACTGAGGCAGAGGGCGCAGCGAGA
GACGAGGAGCAACGCGAGCATCCTGCTCCCGTACGAGAAAGCCGCGAATTCGTGGAGCCC
GGACATCTGGTGCAAGGAGGGGGCGCTGCTGAAACGCGCAAGGAAAGGTAAATTCGTATC
TCGGAACATGCATCCAGCTACGGAAACCAGGATCGAGAAGCACAGAACTACAGAAGCATG
GTCGAAAAAAGCTTAGGCGAAGAGTTTCGTTCTTGATGGTGCAGGGGGTTTGCACAAGAT
AAGAGTATGTATCTACATCAACAAGAGGTCAGAGGTGATACTGAAGCTGAAAAGCAAACA
CATCGGAGGCGCGCTGACAAAGAAGAACAAGAACCGGTGCAGGCGTGGTTTACGGCGTAT
ACAGCGAGCTTCCGACGTGGGCTGAGCCAGGGAAGGACTGCATAGAGGAGACATGCTGCT
GCTTTGGCCTCAGCACGGCGCAGGGCCTAGTGGAGTTCGAGTGCGAGGGCAACGCGAGCA
AGCAGGAGTGGATCGACGACGTGCAGAACCTGCTTCGTCAGGCGGCTCTGCATGACCGAG
TAGGGGATAAACTGGGATTAGTAAAACTCAGCTAGTGCAGTCTCAGTATATAACCCTCTT
TCATGGTAGCAGCAGATTGCTGTGTCCTGCTGCTCCTGCATCAGCGATGCGAGGGGTACA
TTAACATATATTGGTCGTACTCTTGTCACTGACATGCTATACAACATCTATAGTGAT