Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000164_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg50:7068:9235:-1 gene:Zm00001d000164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribulokinase chloroplastic
Sequence

ATGATGGCGATCTGCAGCGCGCACACCACCACCATCTCCCTGCGCTCCCCATGCACGACG
ACCGTCTCGAACGCGGCAGCTGGCTTGGTGCAGAAGCAAGTCATCTTCTTGACCAGCATC
AACAGGAGGAGCGGCAGCAGAAGGCGTGGAGGAGGGGTGAGCAGGACCTTACTCCAGGTC
TCGTGCTCCGCCGACGGCAACAAGCCAGTGGTGATCGGCCTGGCGGCGGACTCCGGGTGC
GGCAAGAGCACCTTCATGCGCCGGCTCACCAGCGTCTTCGGCGGCGCCGCGGAGCCGCCC
AGGGGCGGGAACCCGGACTCCAACACGCTCATCAGCGACACCACGACCGTGATATGCCTC
GACGACTACCACTCCCTGGACAGGACCGGCAGGAAGGAGAAGGGCGTCACCGCGCTCGAC
CCGAGGGCCAACAACTTCGACCTCATGTACGAGCAGGTGAAGGCGATCAAGCAAGGCCAG
GCGGTCCAGAAGCCCATCTACAACCACGTCACCGGCCTCCTCGACCCGCCGGAGCTTATC
ACGCCGCCCAAGATCTTTGTCATCGAAGGTCTGCACCCAATGTTCGACGAGCGTGTGAGG
GACCTCTTAGACTTCAGCATCTACTTGGACATCAGTGATGAGGTTAAGTTTGCATGGAAA
ATCCAGCGGGACATGGCAGAGCGTGGGCACAGCCTTGAAAGCATCAAGGCCAGCATCGAA
GCCAGGAAACCAGATTTCGATGCATATATTGATCCGCAGAAGCAGTACGCTGACGCCGTG
ATCGAAGTTCTGCCGACCCAGTTGATCCCCGACGACGACGAAGGGAAGGTTCTGCGAGTC
AAGCTGATCATGAAAGAAGGGGTGGACAAATTCAACCCGGTCTATCTCTTCGACGAAGGG
TCCACCATCTCCTGGGTGCCCTGTGGAAGAAAGCTCACGTGCTCTTACCCCGGCATCAAA
TTCGCCTACGGCCCAGACATTTACTTCGGAAACGAGGTATCTGTTTTGGAGATGGATGGG
CAGTTCGACAGACTAGACGAGCTCATCTACGTGGAGAGCCATCTGAGCAACCTCTCGACC
AAGTTCTACGGGGAGGTGACACAGCAGATGCTGAAGCACGCGGACTTCCCTGGAAGCAAC
AACGGGACAGGTCTCTTCCAGACCATCGTCGGGCTGAAGATTAGAGACCTCTACGAGCAG
ATTGTTGCCGAGAGGGCTGGCGCGCCAGTGGAAGCAGCCAAAGTTTGA

Peptide Sequence

PEP ID

Zm00001d000164_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg50:7068:9235:-1 gene:Zm00001d000164 transcript:Zm00001d000164_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribulokinase chloroplastic
Sequence

MMAICSAHTTTISLRSPCTTTVSNAAAGLVQKQVIFLTSINRRSGSRRRGGGVSRTLLQV
SCSADGNKPVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICL
DDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKQGQAVQKPIYNHVTGLLDPPELI
TPPKIFVIEGLHPMFDERVRDLLDFSIYLDISDEVKFAWKIQRDMAERGHSLESIKASIE
ARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDDEGKVLRVKLIMKEGVDKFNPVYLFDEG
STISWVPCGRKLTCSYPGIKFAYGPDIYFGNEVSVLEMDGQFDRLDELIYVESHLSNLST
KFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVAERAGAPVEAAKV

Transcript Sequence

Transcript ID

Zm00001d000164_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg50:7068:9235:-1 gene:Zm00001d000164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoribulokinase chloroplastic
Sequence

GAAAAATAGGGACACGCCACATCATCGCCATCCTCATTTCGTCCTGTTATCTCGTAGCTC
CACAGTCCACACCCACCATCCCGTTCTCCCTCTCTTCTCCTCTCCAAGGTCCCTGCCACC
CACACAAGGCTTGGACTCTTGGGCCGGCCGGGGGGGAAGAAGACAAGACAAACGCAGCCG
CCGGCATGATGGCGATCTGCAGCGCGCACACCACCACCATCTCCCTGCGCTCCCCATGCA
CGACGACCGTCTCGAACGCGGCAGCTGGCTTGGTGCAGAAGCAAGTCATCTTCTTGACCA
GCATCAACAGGAGGAGCGGCAGCAGAAGGCGTGGAGGAGGGGTGAGCAGGACCTTACTCC
AGGTCTCGTGCTCCGCCGACGGCAACAAGCCAGTGGTGATCGGCCTGGCGGCGGACTCCG
GGTGCGGCAAGAGCACCTTCATGCGCCGGCTCACCAGCGTCTTCGGCGGCGCCGCGGAGC
CGCCCAGGGGCGGGAACCCGGACTCCAACACGCTCATCAGCGACACCACGACCGTGATAT
GCCTCGACGACTACCACTCCCTGGACAGGACCGGCAGGAAGGAGAAGGGCGTCACCGCGC
TCGACCCGAGGGCCAACAACTTCGACCTCATGTACGAGCAGGTGAAGGCGATCAAGCAAG
GCCAGGCGGTCCAGAAGCCCATCTACAACCACGTCACCGGCCTCCTCGACCCGCCGGAGC
TTATCACGCCGCCCAAGATCTTTGTCATCGAAGGTCTGCACCCAATGTTCGACGAGCGTG
TGAGGGACCTCTTAGACTTCAGCATCTACTTGGACATCAGTGATGAGGTTAAGTTTGCAT
GGAAAATCCAGCGGGACATGGCAGAGCGTGGGCACAGCCTTGAAAGCATCAAGGCCAGCA
TCGAAGCCAGGAAACCAGATTTCGATGCATATATTGATCCGCAGAAGCAGTACGCTGACG
CCGTGATCGAAGTTCTGCCGACCCAGTTGATCCCCGACGACGACGAAGGGAAGGTTCTGC
GAGTCAAGCTGATCATGAAAGAAGGGGTGGACAAATTCAACCCGGTCTATCTCTTCGACG
AAGGGTCCACCATCTCCTGGGTGCCCTGTGGAAGAAAGCTCACGTGCTCTTACCCCGGCA
TCAAATTCGCCTACGGCCCAGACATTTACTTCGGAAACGAGGTATCTGTTTTGGAGATGG
ATGGGCAGTTCGACAGACTAGACGAGCTCATCTACGTGGAGAGCCATCTGAGCAACCTCT
CGACCAAGTTCTACGGGGAGGTGACACAGCAGATGCTGAAGCACGCGGACTTCCCTGGAA
GCAACAACGGGACAGGTCTCTTCCAGACCATCGTCGGGCTGAAGATTAGAGACCTCTACG
AGCAGATTGTTGCCGAGAGGGCTGGCGCGCCAGTGGAAGCAGCCAAAGTTTGATGGCCCG
CGTGCATTCAGATGTCCTAAAACGGGACAGGCCTCTTCAAACTCGACGCACGTCTGTTGG
GGATATATGCGAGCCTAGGAGGATGTGGAAGAAACGTCATTTGCAGAGCTCAGGAAAACG
TGCAGCACTTGTTTAGAT