Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d000143_T002
CDS Infomation	cds contig:B73_RefGen_v4:B73V4_ctg193:266823:271023:1 gene:Zm00001d000143 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	ATGGGCGCCTGTGTATCTTCAAGCAAAAAGCGGAGATCGCAAAGGTCATGCTGTATATAC AGGCGCTACCGTGGCAAGGTTTTAACCAATACACCTATAGTACGCGTCGGTGAAGTGGAG AACCTTGCTTCTTCTGGAGCAGCAGTCCATTTAGGGACTTCTGCAGCTGCTCGACGGAGA TCCGATGGCTCAAACGTTACGTTCCACCTCACACAATTGCAGTGGCGTCACAGTGAGCTG GACACAGAGAATGGAAATGTTGTGTGCCAAGAAGAAGCGTGGTTCGACTCTGTCAGTATC TTGGGATCTGACTCAGATGAAGACTTCAGCAGTGTCAATGGAGACTTCCCTGCTATGTCA AATTCAACAGGTACACAATTGATGCAGTGCGAAGATGCTTCATCTATCGCTGACGCCATC CAGAAGTTTGAATTGATTTTTGATGGTTCTAGTGTTGCTCAAGCTGTTGGGCAGTACCTG AAAAGAGATGCAAATAAAATAGAAGCAGAGAGGCCTAGAGTTGCAAGCCCCGAAGCTTGT GATGTCTCTAGTGGAAAGGTTGAGGATGCTAAGACACGAAATGAGGGTATAAAAAAAGTT AGAAGAGGCGAGGATGCATGTAATACCTTGAAGTCTTTCAAAGATGGAGAGAAGCCTCAT GAAAGCATCTTCAAAAGTTTGACACCAGTGTGCACACCTCGTCATGCTAACAAGGTCCAA CCATTGGCAGTAGCAAGTCCACGGGGCCAAAAGAAGAAATCAGCTGTTGTCAGGCTTTCT TTCAAGAGGCAGTCTTTCGATGGAGAACAAACTACTGAAATATGTTCCTCTAGAAGGTAC TTGATCCGCCCACGAGCTGGATTATTGGTTCCACAAGCTGGTGAGAAAATTTCTGAAGGT TGTTGGTCTGTGCTTGAGCCTTCGGCATTCAAGCTGCGAGGGGAAAGTTTTTTCAAGGAC AAAAAGAAGTCTCCTGCCCCAGCTTGTTCTCCATACACTTCATTTGGTGTGGACATATTC ATGTCCCCTAGGAAAATTCACCACATTGCCCAGCATATTGAGCTTCCATCTGTAAAGCCA AATGATAAAATTCCTTCGCTACTTATCGTAAATATTCAGATGCCTACATATCCTGCTGCT ATGTTCCTTGGTGATAGTGACGGTGAAGGGATTAATCTGGTGCTATATTTCAAACTGAAC GATAACTTTGAGAAAGAAATTTCTCCCCAGTTTCATGACAGCATCAAGAGACTTGTAAGC GACGAAACGGAGAAGGTCAAGGGTTTCCCATTGGACTCAACAGTCCCTTTCAGAGAAAGA TTGAAGATATTGGCAGGGTTAGTTAACCCAGATGACATGAACCTGAGTTCTGCGGAGAGG AAGCTTGTTCAGGCTTACAATGAAAAGCCAGTCCTCTCAAGGCCTCAGCACAACTTTTAT GTGGGATCAAATTACTTGGAGATCGACCTTGATGTACACCGCTTTAGCTTCATCTCGAGG AAAGGGCTCGAAGCATTCCGAGAAAGATTGAAACATGGGATGATTGATCTCGGTCTAACC ATACAGGCCCAGAAGCAGGAGGAACTTCCAGAGCATGTACTGTGCTGTGTAAGGCTAAAC AAAATTGATTTTGTCGATAATGGGCAAATACCAACACTACTGCCATGTGACGATGACTAA

Peptide Sequence

PEP ID	Zm00001d000143_P002
PEP Infomation	pep contig:B73_RefGen_v4:B73V4_ctg193:266823:271023:1 gene:Zm00001d000143 transcript:Zm00001d000143_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	MGACVSSSKKRRSQRSCCIYRRYRGKVLTNTPIVRVGEVENLASSGAAVHLGTSAAARRR SDGSNVTFHLTQLQWRHSELDTENGNVVCQEEAWFDSVSILGSDSDEDFSSVNGDFPAMS NSTGTQLMQCEDASSIADAIQKFELIFDGSSVAQAVGQYLKRDANKIEAERPRVASPEAC DVSSGKVEDAKTRNEGIKKVRRGEDACNTLKSFKDGEKPHESIFKSLTPVCTPRHANKVQ PLAVASPRGQKKKSAVVRLSFKRQSFDGEQTTEICSSRRYLIRPRAGLLVPQAGEKISEG CWSVLEPSAFKLRGESFFKDKKKSPAPACSPYTSFGVDIFMSPRKIHHIAQHIELPSVKP NDKIPSLLIVNIQMPTYPAAMFLGDSDGEGINLVLYFKLNDNFEKEISPQFHDSIKRLVS DETEKVKGFPLDSTVPFRERLKILAGLVNPDDMNLSSAERKLVQAYNEKPVLSRPQHNFY VGSNYLEIDLDVHRFSFISRKGLEAFRERLKHGMIDLGLTIQAQKQEELPEHVLCCVRLN KIDFVDNGQIPTLLPCDDD

Transcript Sequence

Transcript ID	Zm00001d000143_T002
Transcript Infomation	cdna contig:B73_RefGen_v4:B73V4_ctg193:266823:271023:1 gene:Zm00001d000143 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	AATGCCGAACAGTTAGTATTTGGGCGATTCAAGGCGGAGAGTGCCTCCGCCTTTGGGATC AGGCTGGGATTCCGATGCGATTCGTAGATGTTCCTATGCTGCTCAGGTGTCCCCCTCTGA TCAATCGTGTCAGTTCTTCGGGCTGTCATAGGGAGTGGCCTGCGTGTATGGTGATTGGTA GCCTGGCAGGCCACCAATAATATCTTCTCTCCTGGGCTTATTTGCCTCCATTTGTCATCA GCTTCTTGAAATCCACAGTCTGGTCAAATGCTGTGAAGAAAATTCCTCTAGTGCTGAATA AGTTCAGCATAGAACCACTATGGGCGCCTGTGTATCTTCAAGCAAAAAGCGGAGATCGCA AAGGTCATGCTGTATATACAGGCGCTACCGTGGCAAGGTTTTAACCAATACACCTATAGT ACGCGTCGGTGAAGTGGAGAACCTTGCTTCTTCTGGAGCAGCAGTCCATTTAGGGACTTC TGCAGCTGCTCGACGGAGATCCGATGGCTCAAACGTTACGTTCCACCTCACACAATTGCA GTGGCGTCACAGTGAGCTGGACACAGAGAATGGAAATGTTGTGTGCCAAGAAGAAGCGTG GTTCGACTCTGTCAGTATCTTGGGATCTGACTCAGATGAAGACTTCAGCAGTGTCAATGG AGACTTCCCTGCTATGTCAAATTCAACAGGTACACAATTGATGCAGTGCGAAGATGCTTC ATCTATCGCTGACGCCATCCAGAAGTTTGAATTGATTTTTGATGGTTCTAGTGTTGCTCA AGCTGTTGGGCAGTACCTGAAAAGAGATGCAAATAAAATAGAAGCAGAGAGGCCTAGAGT TGCAAGCCCCGAAGCTTGTGATGTCTCTAGTGGAAAGGTTGAGGATGCTAAGACACGAAA TGAGGGTATAAAAAAAGTTAGAAGAGGCGAGGATGCATGTAATACCTTGAAGTCTTTCAA AGATGGAGAGAAGCCTCATGAAAGCATCTTCAAAAGTTTGACACCAGTGTGCACACCTCG TCATGCTAACAAGGTCCAACCATTGGCAGTAGCAAGTCCACGGGGCCAAAAGAAGAAATC AGCTGTTGTCAGGCTTTCTTTCAAGAGGCAGTCTTTCGATGGAGAACAAACTACTGAAAT ATGTTCCTCTAGAAGGTACTTGATCCGCCCACGAGCTGGATTATTGGTTCCACAAGCTGG TGAGAAAATTTCTGAAGGTTGTTGGTCTGTGCTTGAGCCTTCGGCATTCAAGCTGCGAGG GGAAAGTTTTTTCAAGGACAAAAAGAAGTCTCCTGCCCCAGCTTGTTCTCCATACACTTC ATTTGGTGTGGACATATTCATGTCCCCTAGGAAAATTCACCACATTGCCCAGCATATTGA GCTTCCATCTGTAAAGCCAAATGATAAAATTCCTTCGCTACTTATCGTAAATATTCAGAT GCCTACATATCCTGCTGCTATGTTCCTTGGTGATAGTGACGGTGAAGGGATTAATCTGGT GCTATATTTCAAACTGAACGATAACTTTGAGAAAGAAATTTCTCCCCAGTTTCATGACAG CATCAAGAGACTTGTAAGCGACGAAACGGAGAAGGTCAAGGGTTTCCCATTGGACTCAAC AGTCCCTTTCAGAGAAAGATTGAAGATATTGGCAGGGTTAGTTAACCCAGATGACATGAA CCTGAGTTCTGCGGAGAGGAAGCTTGTTCAGGCTTACAATGAAAAGCCAGTCCTCTCAAG GCCTCAGCACAACTTTTATGTGGGATCAAATTACTTGGAGATCGACCTTGATGTACACCG CTTTAGCTTCATCTCGAGGAAAGGGCTCGAAGCATTCCGAGAAAGATTGAAACATGGGAT GATTGATCTCGGTCTAACCATACAGGCCCAGAAGCAGGAGGAACTTCCAGAGCATGTACT GTGCTGTGTAAGGCTAAACAAAATTGATTTTGTCGATAATGGGCAAATACCAACACTACT GCCATGTGACGATGACTAAAAAGTTCGGCCAGCAGCCTAGCAACAAATTAACTGAAACTG ATGTTTCGGCCAAGAACATGAGCATGTGCTCACAAGTCCATTCCCCGAAGAATTGTGAGA TGAACTGAAGTGGGGATCTGCGTGTATAGTCATGGTTTTTTTTTTCTTTCGTATTCTGGT GTTGCGAATCAAATTCTGTTGGAACTTGGAAGTTGATTTGCGAGTCCGGAATTGAACATG CCGGCAAGACGTCTTATCCATGTTCTATTTTTTTCTTTTGAAGGAGTATTATTAATTACT CTGCTTATAAGAAAGCATATAAGAGGTACAACAGAACGGGATAACAAAGGATAAAA