Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d000124_T011
CDS Infomation	cds contig:B73_RefGen_v4:B73V4_ctg56:125939:129872:-1 gene:Zm00001d000124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 40
Sequence	ATGGTGGATGTGGAACTGTTTTATAAGGACACTAGTGATCACAGCATTAGCTCTGAGGAA GAAGATATGCTTGTCAGGAGCTGTAGCAATCTCAATGTGAGCTTTGGATATCATTGTGAT TCTTATCAGAGCTTTTCTCCTGAAAATGATCATGGAAATGACATTTCTCCTAAGAACATG TTTGGGACTAATACGATGATGGGGTCACGGAATGGCTCATTTACTTGTTTGTCCGGTGCT GCTATTAGTGCAAATTTTACATTGGCAAATACAAATATTTGCAATGGTCTTATTGGCGAA GAAATTTTACCAGAACTAGATTCTCCAAACTCCTTCAGAAAAATTATTTCATCTCCATCA ATGTCAAGATTGGACTCGTTCTCTACCTCACAAGGCAGTCCTGTGTCAACTGAGAGCTCA ATATTTGAGATCAGTAAAAATATTTGGAGGTCCAGTGCCCCAACAACTGTATCATCCAAT TTTCTGACTAATACAGAGGTGAAAATGGCTGGCGGAGCTGCTGGAGAGGATAGAGTCCAA GCTGTGTGCTCAGAGAAAAATGGATGGCTGATTTGTGGGATATATGATGGGTTTAATGGG AGGGATGCAGCTGATTTTCTTGCGGTAACTCTATATGATAACATAGTATATTACTTATAC CTGCTGGAGAATCGGATAAGGCAACAAAATGGTTTGTACAATTCATCAGAAAGCTCTCTT AATGGTCTCAAAAGTGAGTTAACACTAGCCATGAGAAATTCAGAAAATGAAGGCATAAAA TTTTCTGAAACATTTCGATCTGGTGTACTGAATTGCCTTTCTACTGCTGTTGAGCAAGCT GAGAATGACTTTTTATGCATGGTTGAACAAGAGATGGATGATAGACCAGATTTAGTTTCG GTAGGGTCTTGTATCCTGGTTGTTCTTCTTCAAGGAACAGATCTGTGCATCTTAAATATG GGGGACAGTAGAGCTGTGCTTGCTTCCATGCCATATGTAGAAAATGGTGCTTTGAAGGCT ACTCAACTGACAGAGACCCACTCGCTTGAAAATCCTTTGGAGTACCAAAAACTTTTAGCT GAACATCCCAATGATTCTTCAGTTGTCAGGGGTAACAAAATAAAAGGAAAGCTGAAGGTT ACTCGTGCTTTTGGAGTTGGCTATCTAAAGCAGAGGAAGTTCAACGACGCACTCATGGGC ATTCTGCGAGTCCGCGATTTGAGCAGCCCTCCATATGTTTACACAAATCCACACACATTG AGTCACAAAGTTACAGATGATGATTTGTTTGTTGTGCTTGGTAGTGATGGCTTATTTGAT TTCTTCAGCAATGATGAAGTTGTTCGGTTGGTTTATCAATTTATGCATGATAATCCAATG GGGGATCCTGCAAAATATCTTATTGAGCAACTTATACTCAAAGCAGCCAAGGAAGCAGCT CTAACAGCCGAAGAATTGATGAGGATACCTGTTGGGAGTAGGAGAAAGTACCACGATGAT GTGACTGTCATTGTTATCATCCTTGGAAATGCACAGAGGACGATGACTGCATCAACTTCC TTGTGA

Peptide Sequence

PEP ID	Zm00001d000124_P011
PEP Infomation	pep contig:B73_RefGen_v4:B73V4_ctg56:125939:129872:-1 gene:Zm00001d000124 transcript:Zm00001d000124_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 40
Sequence	MVDVELFYKDTSDHSISSEEEDMLVRSCSNLNVSFGYHCDSYQSFSPENDHGNDISPKNM FGTNTMMGSRNGSFTCLSGAAISANFTLANTNICNGLIGEEILPELDSPNSFRKIISSPS MSRLDSFSTSQGSPVSTESSIFEISKNIWRSSAPTTVSSNFLTNTEVKMAGGAAGEDRVQ AVCSEKNGWLICGIYDGFNGRDAADFLAVTLYDNIVYYLYLLENRIRQQNGLYNSSESSL NGLKSELTLAMRNSENEGIKFSETFRSGVLNCLSTAVEQAENDFLCMVEQEMDDRPDLVS VGSCILVVLLQGTDLCILNMGDSRAVLASMPYVENGALKATQLTETHSLENPLEYQKLLA EHPNDSSVVRGNKIKGKLKVTRAFGVGYLKQRKFNDALMGILRVRDLSSPPYVYTNPHTL SHKVTDDDLFVVLGSDGLFDFFSNDEVVRLVYQFMHDNPMGDPAKYLIEQLILKAAKEAA LTAEELMRIPVGSRRKYHDDVTVIVIILGNAQRTMTASTSL

Transcript Sequence

Transcript ID	Zm00001d000124_T011
Transcript Infomation	cdna contig:B73_RefGen_v4:B73V4_ctg56:125939:129872:-1 gene:Zm00001d000124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 40
Sequence	CCTTGGCCCGTGTTCTGTAGATGCGTATGTAGTTGTACACGCAACTGCAGCTGCAATCTC ACTCGACTTGCGCCGTATGCTGATTGTTGATTCGATGTTCTGTTCTGCTGCGATAGGGCC TTTCAAGAACGGGCGGCGGCGCTTTACCTGACGCAAATTGCGCCGGTCTCCTGCCTTGCT GCGCGCTTGGGGGTTGGGCTCAGGAATGGGGGTAGAGCAGGGGCTGCGTCGCCTGGCTCG ATTCCCATCTCTCTGAACTTAGATGGATGCATCTGTAAACACCAAGAAGAAGGTTAGTTT CTGTGGGAACACTGGCCACAGCCGCTGCGGTGAAGTTCATTTAGCTGCTGTGTGCTCAGG TCGTATGCGAAGCAACCCCTTCTCGCTTCAGGTTATTGTGTGCTCTGTCCCCCTACTGAT TTTAGAACCGGTGTATCCAATTTTTATGAGAGCTAAGAGGGTAGGTTTGTACAATTCAAG GTGGAGTAGGCTGTCCCTGATGGCGTTTGATTTCTCATATAAAAGTTTGTGGTTCGGGAA CAGGCAAATATTACAACCTGTACAAGTCAAACTTGAGTTTTCTTATTTTATTAATGGTGA TTGGTACCTAAGATGTAATTTCCGTGCTATTAAATCTAGGTGGAAAAATAGTCAATCGAA CGTACTTCTTCCGTCCTAGAAGAACGGCATTCTACTTTGTTTTCATCAATTCATCTCAGA TTTAGCAAAGTTTATAAAAAATATAACTTTTATGATTCCAAATTATTAAAGTCAGTTACA TCATGAAATATATTTTCATATTATATCTATCTGAAGTAATAGATGTTGATACTATTTGCT GTAAACTTAGTAGAGACCGGTTCAAACCTAAACTTACATTCTTTTAGGTAGTGTTTGGTT GAAGAGGCAAGTATAACGGAGTCGTTCTGTTCTAGTTTTGTTGCTGTTTGGTTACAAAGG AACTAGAACAAAATCGCTCCAATTAGGGAATATTCTCCTCAGATCCGGAACCATTCCGCT CCAAAAAATCAACAGGACGGAGCCGCTCCGTTCCCATCCCGCTCTCACAGTCACGCTCCA TTCCGTTCACTCTGCAACCAAACAAAAAACAGAGCCGCTCCGTTCCAAATTACCAAACAC AGAACAGAGCGGCTCCGTTCCTAGAATCAGGGATGGAACGGCTCTGTTCTACTTGGCTCT TCAACCAAACACTTAATTAGGGATGAAAGTAGTACCATGTTAGCAGGAAGGAATACTTCA TTATTTAGATGACGGGAGTCTAAGTTCTGGCCTCTGCACTGGCTAGGGATGCACACGACC ACTAAACTCACAAGCATATAAATAGATGAACACCCGGTTTTGAACCCTGTGAATTGTCAT ATATATTTATACTGAGAGGATCAATTGTACTGCAATCACCACCATACTATGACCAGAACT AGAGAAGCATCCATCTGCCTTGTTAAGGTGCCATCCTTTGCAATTGTTGTGCACAGATCT ACAGATTCAGTAGGCTCTAGGCTGGAACATACTGATTTACAATCACCTTGCTATTAGCTT ATCAAAGATTATGTGACCCTTTTTGGTTCTTTTACAGTCGGTTTAACAACAAAATAATGA TGTGTATTCGGATCATTAGCTAGGTAATATTTTTTTGAAATACTTTGTTCTTAGTATTGC AGGTTTGGTTTGCATTTCCGTTCAAGTATAAAGGAAGTAGTATTTGCCATTTTGGCATAG CATTTGAATAGCACAGGAACCTAGAAAACAGTGTTCCAGCAGTACTACGTTACACTGGTG TTATACTATTATAGAAAACATGGTGGATGTGGAACTGTTTTATAAGGACACTAGTGATCA CAGCATTAGCTCTGAGGAAGAAGATATGCTTGTCAGGAGCTGTAGCAATCTCAATGTGAG CTTTGGATATCATTGTGATTCTTATCAGAGCTTTTCTCCTGAAAATGATCATGGAAATGA CATTTCTCCTAAGAACATGTTTGGGACTAATACGATGATGGGGTCACGGAATGGCTCATT TACTTGTTTGTCCGGTGCTGCTATTAGTGCAAATTTTACATTGGCAAATACAAATATTTG CAATGGTCTTATTGGCGAAGAAATTTTACCAGAACTAGATTCTCCAAACTCCTTCAGAAA AATTATTTCATCTCCATCAATGTCAAGATTGGACTCGTTCTCTACCTCACAAGGCAGTCC TGTGTCAACTGAGAGCTCAATATTTGAGATCAGTAAAAATATTTGGAGGTCCAGTGCCCC AACAACTGTATCATCCAATTTTCTGACTAATACAGAGGTGAAAATGGCTGGCGGAGCTGC TGGAGAGGATAGAGTCCAAGCTGTGTGCTCAGAGAAAAATGGATGGCTGATTTGTGGGAT ATATGATGGGTTTAATGGGAGGGATGCAGCTGATTTTCTTGCGGTAACTCTATATGATAA CATAGTATATTACTTATACCTGCTGGAGAATCGGATAAGGCAACAAAATGGTTTGTACAA TTCATCAGAAAGCTCTCTTAATGGTCTCAAAAGTGAGTTAACACTAGCCATGAGAAATTC AGAAAATGAAGGCATAAAATTTTCTGAAACATTTCGATCTGGTGTACTGAATTGCCTTTC TACTGCTGTTGAGCAAGCTGAGAATGACTTTTTATGCATGGTTGAACAAGAGATGGATGA TAGACCAGATTTAGTTTCGGTAGGGTCTTGTATCCTGGTTGTTCTTCTTCAAGGAACAGA TCTGTGCATCTTAAATATGGGGGACAGTAGAGCTGTGCTTGCTTCCATGCCATATGTAGA AAATGGTGCTTTGAAGGCTACTCAACTGACAGAGACCCACTCGCTTGAAAATCCTTTGGA GTACCAAAAACTTTTAGCTGAACATCCCAATGATTCTTCAGTTGTCAGGGGTAACAAAAT AAAAGGAAAGCTGAAGGTTACTCGTGCTTTTGGAGTTGGCTATCTAAAGCAGAGGAAGTT CAACGACGCACTCATGGGCATTCTGCGAGTCCGCGATTTGAGCAGCCCTCCATATGTTTA CACAAATCCACACACATTGAGTCACAAAGTTACAGATGATGATTTGTTTGTTGTGCTTGG TAGTGATGGCTTATTTGATTTCTTCAGCAATGATGAAGTTGTTCGGTTGGTTTATCAATT TATGCATGATAATCCAATGGGGGATCCTGCAAAATATCTTATTGAGCAACTTATACTCAA AGCAGCCAAGGAAGCAGCTCTAACAGCCGAAGAATTGATGAGGATACCTGTTGGGAGTAG GAGAAAGTACCACGATGATGTGACTGTCATTGTTATCATCCTTGGAAATGCACAGAGGAC GATGACTGCATCAACTTCCTTGTGAAAGAATGGAGAGGTAGAGAGACGGGGGCTATCAGC TGGTAAATTTTTGTGGGTTTTTTGCATACATGTATTCCAAAATACAATTTTTTTTCCTGG GAATCGCGTGGTAGTCAATAAAACCAAATAAAAATGTATATATTGTTTCGAAATTTGGGA AGTGAACAGAACCTT