Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000110_T005
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg52:188045:193310:1 gene:Zm00001d000110 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 61 description:SWI/SNF complex subunit SWI3C
Sequence

ATGGAGGGTCACGGGGTGCCCAAGCAGTTCCAGGGTCGCTTCCATGTGGTGCCCAAGCAC
TCAGATTGGTTCTCCCCAGGGACAGTTCATAGGCTGGAAAGGCAGGTAGTGCCACACTTC
TTTACAGGGAAGTCTCCAGGGCATACTCCGGAGAAGTATGTCATGTTAAGGAATAAAGTT
ATTGCTAAATACTTAGAGAACCCAAGCAAGAGGCTTGCTTTTGCTGAGTGCCAGGGGCTT
GTTGGGAGCACATCTGAATTGTATGATCTGAGTAGGATTGTTAGGTTCTTGGACACTTGG
GGCATCATCAATTACCTTGCGGCTGGGTCTGTGCACCGTGGTCTGAGGATGGCAACTTCG
CTTCTAAGAGAGGAACCTACAGGGGAACTGCAATTGCTTACAGCACCATTGAAATCAATC
GATGGTCTAATTTTGTTTGACCGGCCAAAATGTAGCCTCCCAGTGGAGGACATTTCTAGG
ATGGCAGCGACTTCATCGAACTCGGAGGCTGTGGATTTTGATGCTGCATTTTCAGACTTG
GATGGAAAGATTAGGGAGCGTTTGTCTGAGAGCTCTTGCAGTTATTGCTTACAGCCTTTG
CCAAGTTTACATTACCGGTCGCAAAAGGCAGATATTTTTCTATGTTCTGATTGCTTCCAT
GATGCGAGATATATCACTGGACATTCTTGCTTAGATTTCCAAAGAGTTGATGGGGATAAT
GATGAATCAGAAAATGATAGTGATAAATGGACTGATGAAGAAACATTGTTGCTGTTGGAA
GGCATTGAGAAGTACAATGACAACTGGGATGACATTGCAGGTCATGTTGGAACAAAATCA
AAGGCACAATGTATCTACCATTTTATTCGGTTGCCAGTGGAAGATTGTTTGCTAGAGAAT
GTTGAGATACCCAATGCACCCATTCCATTTCGACCACAAAGCAATGGTTATCAATGTTTA
GATTCCAATGGCAGCACATCAGGAGCTCCAGTTCAAAATATCCAACAAGGCAATGAGCTT
CCGTTCATAAATTCTTCTAATCCGGTCATGTCACTGGTTGCATTTTTGGCCTCTTCAATT
GGACCCAGAGTTGCAGCATCATGCGCACATGCAGCATTATCTTTTTTGACTAGAGACGAG
GATTCCAGGGGTGAGTTCAGAAGGCTCACATGCTGGTGGTCTGGGCAATGGTGCAAATCC
AAATTTTCAGAACCATAA

Peptide Sequence

PEP ID

Zm00001d000110_P005
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg52:188045:193310:1 gene:Zm00001d000110 transcript:Zm00001d000110_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 61 description:SWI/SNF complex subunit SWI3C
Sequence

MEGHGVPKQFQGRFHVVPKHSDWFSPGTVHRLERQVVPHFFTGKSPGHTPEKYVMLRNKV
IAKYLENPSKRLAFAECQGLVGSTSELYDLSRIVRFLDTWGIINYLAAGSVHRGLRMATS
LLREEPTGELQLLTAPLKSIDGLILFDRPKCSLPVEDISRMAATSSNSEAVDFDAAFSDL
DGKIRERLSESSCSYCLQPLPSLHYRSQKADIFLCSDCFHDARYITGHSCLDFQRVDGDN
DESENDSDKWTDEETLLLLEGIEKYNDNWDDIAGHVGTKSKAQCIYHFIRLPVEDCLLEN
VEIPNAPIPFRPQSNGYQCLDSNGSTSGAPVQNIQQGNELPFINSSNPVMSLVAFLASSI
GPRVAASCAHAALSFLTRDEDSRGEFRRLTCWWSGQWCKSKFSEP

Transcript Sequence

Transcript ID

Zm00001d000110_T005
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg52:188045:193310:1 gene:Zm00001d000110 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 61 description:SWI/SNF complex subunit SWI3C
Sequence

CGCGCCGTCGTCCTTCTCCGCCGTCGTCCCCGCCGCCGACGATGCCTCGTCCATGCGTCC
GGGCCCTTCTCGAAACCTCTTAAACTCTCTAGCGCCAGATCTAACCGCCTTGCTAACCCT
AACTCCCAGATTCGCGCCTCAAATGGCGCAAGCGGAAGCTCAACCCCGACGCGTCCCCGT
CGAAGCCCTCCATTTCTACCGCGGCGGCCGACCACTCCTCCGACTCCGACTCCGCCGCCT
TAAACGACGACGAGGACCCCTCCGCCCTCGGCGCGACGGGGGACGGGGCAACCGACAACG
ACGCGGACGCCGCGGCGTCCGAGGACCCCGCGGTCGAGCTCCGCGAGGCGGAGGTTCTGC
CCTCGGCCGATGCCATCTCTAGCTTCCCTGCCGCCAAGCGCCGCGTGGTCAACCGGCCGC
ATGCGTCCATCCTCGCGCTGCTCGAGGCCGAACGATCTGCTTGTTCCGGCGATGTCCCTA
CCGTGGCACTGCCGGCGCTAGAGAACATCTCGCACGGGCAGCTGCAGGTGCTGTCTGGGG
TGCTTCCGGACCACCCATCCCTTGCGACAGACCCCGACAAGCCGTCCTTGTATGTGTGCA
CGCCGCCTCCCCTCATGGAGGGTCACGGGGTGCCCAAGCAGTTCCAGGGTCGCTTCCATG
TGGTGCCCAAGCACTCAGATTGGTTCTCCCCAGGGACAGTTCATAGGCTGGAAAGGCAGG
TAGTGCCACACTTCTTTACAGGGAAGTCTCCAGGGCATACTCCGGAGAAGTATGTCATGT
TAAGGAATAAAGTTATTGCTAAATACTTAGAGAACCCAAGCAAGAGGCTTGCTTTTGCTG
AGTGCCAGGGGCTTGTTGGGAGCACATCTGAATTGTATGATCTGAGTAGGATTGTTAGGT
TCTTGGACACTTGGGGCATCATCAATTACCTTGCGGCTGGGTCTGTGCACCGTGGTCTGA
GGATGGCAACTTCGCTTCTAAGAGAGGAACCTACAGGGGAACTGCAATTGCTTACAGCAC
CATTGAAATCAATCGATGGTCTAATTTTGTTTGACCGGCCAAAATGTAGCCTCCCAGTGG
AGGACATTTCTAGGATGGCAGCGACTTCATCGAACTCGGAGGCTGTGGATTTTGATGCTG
CATTTTCAGACTTGGATGGAAAGATTAGGGAGCGTTTGTCTGAGAGCTCTTGCAGTTATT
GCTTACAGCCTTTGCCAAGTTTACATTACCGGTCGCAAAAGGCAGATATTTTTCTATGTT
CTGATTGCTTCCATGATGCGAGATATATCACTGGACATTCTTGCTTAGATTTCCAAAGAG
TTGATGGGGATAATGATGAATCAGAAAATGATAGTGATAAATGGACTGATGAAGAAACAT
TGTTGCTGTTGGAAGGCATTGAGAAGTACAATGACAACTGGGATGACATTGCAGGTCATG
TTGGAACAAAATCAAAGGCACAATGTATCTACCATTTTATTCGGTTGCCAGTGGAAGATT
GTTTGCTAGAGAATGTTGAGATACCCAATGCACCCATTCCATTTCGACCACAAAGCAATG
GTTATCAATGTTTAGATTCCAATGGCAGCACATCAGGAGCTCCAGTTCAAAATATCCAAC
AAGGCAATGAGCTTCCGTTCATAAATTCTTCTAATCCGGTCATGTCACTGGTTGCATTTT
TGGCCTCTTCAATTGGACCCAGAGTTGCAGCATCATGCGCACATGCAGCATTATCTTTTT
TGACTAGAGACGAGGATTCCAGGGGTGAGTTCAGAAGGCTCACATGCTGGTGGTCTGGGC
AATGGTGCAAATCCAAATTTTCAGAACCATAATGGTGCTTCACCATCCATTTCTCCAGGA
AATGTTAAATATGCTGCCATGCTTGGTCTGTCAGCAGCAGCAATGAAGTCTAAGCTCTTT
GCCGATCAAGAAGAACGCGAAGTGCAAAGACTAACTGCTACTGTAATAAATCATCAGGTT
AGTATGTGTTTCACCATCTGATTTGCACGCACAGCTGTGACTGAGTCAAGCCGTTGTTAG
GTGTGGTAAAATTTCTACTGAACTGGATCATTTGTTGTTGCATGCTTGGCACTGGGCTTG
TTAGAGTCCTTCACATCTGACTTATCGTTAGCGCCCCGTTTGGATCCTTGGAATTGAATT
CCATTCTAAAAATAGTAATTTAGGCACCAATCGATTAGGCTAATTCGGTTTTATACAAAA
TATATTTGTATACTATTATTAGCAAGATGTCCGAGATATTTATGTGCTACATTTTTATTA
TAGAGGAGTGAGCCGAAGAGCGTCCTATAAGTTGTAGAGTAGAAACAAATTCTACTTATA
CGTAAAATCATTTCTCATCATTTGCCCCATGAATTGAAGATAGGCTTATATCCGAACTTT
GGAAAGTGGTGGAATGTTAAATTCCAAGCTAAATAGGTTACTTTATTAAGTAAATTTCAA
TTCCTACAAAATGAATGGATCCAAACGCCCCGTAGGTGAAAACTGGCATAGGTTTAAGAA
GTCGGCCAAAGAATTTTGGGTCCCTTGATATCAGAGTTGCCTATTTAATTAAATTGGAAA
AAGCTGTCTGGTCCTGGCATACGTTTCCTAGCCTATCTTGATAGTATATAGTACGAGATA
GCTTATTGCTAGATCCATGTCAGAGTAGGGTTAAATTTTCTGGTACCAGCATGGTTGTTG
TTTTGATAGACCCTTATTCACACATACTCTAGTATGTTGTTTGCTGAGGATGGCTTATTG
ATATACACACACACACACACACACACACACACTATTGCAACACCTTAATTTGCAGTTGAA
GAGATTGGAGTTGAAGCTGAAGCAGTTTGCGGAAGTTGAGACCTTGCTCTTGAAGGAATG
TGAGCAAGTAGAAAGGGTTAGACACAGGATTTCAGCTGAACGCGTCAGGATGAGGTCAGC
CCTATTAGGTCCCACCGGAAGCGGTCTACCAGGGGGCAGTTGTAGCACTATGCCATCAAA
TCCAGCAGGCATGAGCCCCAGACCAGTCGGTGTGCCAGGCTACATGCCACAGACCAGCAT
GCCAGCCACATATGCCAACAACCTGCAGGGGCATGGGAATCCTCAGATGCCGTTCTTACA
TCAGCGGCCTCAGATGCTTTCGTTCGGCCCTCGCCTACCACTCTCAGCCATCCAGACTCA
ACCATCACCACAATCATCAAACATGTTCAACTCTGGCATGCCCAATTCGATTGCTCCTAA
CCACCATCAGTTGCTGAGATCATCCTCCGGAAACAATTCTAGTGCAGGATAGGGGAATTG
TCCATAAGATTTTTTTTTTCTCAGCTTAGGTTTGTCAGGTGTAGCATTATGTCATTTATA
AACACATCACTGTAATTCATTTATGTGATGTATGTGTTTGTCATATAAGTTTTTTATTAG
GTCCTATAAATTGTCCCCATATTGCTGCGCCCTTGTGTACCTTTGTTACCAGGTCACCTC
TTCCCAGTGCAGGGAGATTCAAATGAACAGAATATGTTTTCATATGTATCCCTTGAGAAC
TCTTATTGAATATATATGTATGTAGTT