Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d000039_T001
CDS Infomation	cds contig:B73_RefGen_v4:B73V4_ctg182:516538:520597:-1 gene:Zm00001d000039 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGGGTGCACGGCGTCCAAGGTGGAGCAGGAGGACACGGTCCGGCGCTGCAAGGAGCGC CGCCGCCACATGAAGGACGCGGTGGCGGCGCGCCAACTGCTAGCCTCCGCGCACGCCGAC TACCTTCGCTCCCTCCGCGTCACCGCCGCCGCGCTCTCGCGCTTCGCGCAGGGCCACCCC TCGCTCGCCGTTTCGCACCACACTGCCCCCGTCCTCCTCTCCGCCGCCGCGCCGCCGCCC GCCCCCATCGCCGTCCATGCGTTCCCCACACCGGCGCCCTCCACCGCTGCGTCGTCATCG CTCCCGCCTCCGACGCCGCTCGTCCAGCGCCCACACCCGCCGCCCCAGCCGCCCACGGCG GCGGCGATGGCGGCGCCGCAGCCGGCGCTGGCGAGGGCACCACGCCCACGGCGGCTCAGG GTGCCCCACATCCTGTCGGACTCCAGCGTGACCAGCCCCGCGCAGCCGTCATTCCGCAAG CAGCCGCCAGTGGGAACACCATCCTCCTCGTCCGCATGGGACTGGGAGAACTTCTACCCG CCGTCGCCGCCAGACTCCGAGTTCTTCGACCGCCGGAAGGCCGAGGTCGAGCAGGCCAGC CGCCTCCGGGAGCTCGAGGAGGAGGAGAAGGCCCGAGCCTACCTCCACCATCACACCCAC TACAACCTCAAGGAAGAAGACGAGGCCGCTGAAGACGACGACGGTGAGGTGGACCATGAA CCAGATGGGATGCATTCCGGCGGATGGGAGGACGACGAGCACTACGCGTCCACGACCACG TCGGAGACCAGATCGGACGAGGAGGGCGAGATGGGGGACAGATCGGAATGCGGGTTCGCG GCCAGATCAGAGTGCGGGTTCGTGGCCAGATCGGAGTACGGCGGGACGGCACCGTCAGAG TACGCCGCCGTACCATTGCCCCTGAGGAGGGATGAAAGGTCGGAGGCTGGCGACTTCTCC ACTGTCATGGCGGCGACAGAGATGCGGATGGTGGTGCGTCATCGCACCCTCGCGGAAATC GTGGCGGCCATTGAGGAGTACTTTGTCAAGGCAGCCGACTCCGGCAACGATGTGTCCGAG CTTCTGGAGGCCAGCCGCGCACAACTCGACCGCAACTTCCGGCAGCTTAAAAAGACGGGT TACCATTCCAACAGCGTGCTATCAGCATTCTCATCGACGTGGACGTCAAAACCGCCATTG GCTGTACGATACAAGTTGGACACTAATGCACTGGAGATGGAGTCAACGGAAGGGAAGAGT CATGGATCCACTCTAGAGCGGCTTTTGGCTTGGGAGAAGAAGCTCTACGAGGAGGTCAAG GCAAGGGAGAGTGTGAAGATTGAGCATGAGAAAAAGCTTTCTACTCTGCAGAGCCTGGAA TACAAAGGGAGGGATAGTGCAAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAA TCACTGATTGTTGTTACCTCTCAGGCTGCCACAACTACATCATCAGCCATCGTTAGAGTC CGTGACAATGAGCTTGCACCACAGCTTGTTCAGCTCTGTTTTGCGCTATTGGGCATGTGG AGGTCAATGAACCATTTCCATGAGATACAGAATGAGATTGTTCAGCAAGTCCGTGGTCTG GTGGACAGCTCCATGGCTGAGTCAACATCTGACCTCCACAGGCTTGCAACTCGTGACCTT GAGGCTGCTGTTGCGGCGTGGCACTCCAACTTCGACCGCCTCATCAAGTATCAGCGCGAC TACATCCGCTCTCTGTATGGCTGGCTGAAGCTCACACTCTGCCAGGTGGATAGCTGTGTG CCACAGGGAGCCCATGCCTCGATGATCTCGCGCGAACTCACCAGCTTCTGTGACGAGTGG AAGCAAGCACTAGACCGTCTTCCAGACGCTGTTGCTTCGGAGGCGATCAAGAGCTTTGTG AACGTTGTCCATGTCATCTACGCCAAGCAGGCAGAGGAGATGAAGGTGAAGAAGCGGGCA GAGGCATACTCGAAGGAGCTAGAAAAGAAAACCAACTCGCTCAGGTCCGTCGAGAAGAAG TACTACCAGTCCTACTCGATGGTCGGCCTTGGCCTTCCTGGCAGCGGCGGGCACGGTGGC ATTGACAGCCACGCGTACGACGCCCGTGATCCTCTTGCGGAGAAGAAAACCGAGATCGCC CAGTGCCGTCGGAAGGTGGAGGACGAGATGGCGAGGCACGCTAAGGCCATCGAGGTCACG CGGTCAATGACGCTGAACAACATCCAGACAGGCCTGCCGGGTATATTCCAAGCCATAGCT GGTTTCTCAGGGACAGTGGTTGAAGCTCTTGACGTGGTGTGCCGCCGAGCTGGGTCAGTG CGGTAG

Peptide Sequence

PEP ID	Zm00001d000039_P001
PEP Infomation	pep contig:B73_RefGen_v4:B73V4_ctg182:516538:520597:-1 gene:Zm00001d000039 transcript:Zm00001d000039_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MGCTASKVEQEDTVRRCKERRRHMKDAVAARQLLASAHADYLRSLRVTAAALSRFAQGHP SLAVSHHTAPVLLSAAAPPPAPIAVHAFPTPAPSTAASSSLPPPTPLVQRPHPPPQPPTA AAMAAPQPALARAPRPRRLRVPHILSDSSVTSPAQPSFRKQPPVGTPSSSSAWDWENFYP PSPPDSEFFDRRKAEVEQASRLRELEEEEKARAYLHHHTHYNLKEEDEAAEDDDGEVDHE PDGMHSGGWEDDEHYASTTTSETRSDEEGEMGDRSECGFAARSECGFVARSEYGGTAPSE YAAVPLPLRRDERSEAGDFSTVMAATEMRMVVRHRTLAEIVAAIEEYFVKAADSGNDVSE LLEASRAQLDRNFRQLKKTGYHSNSVLSAFSSTWTSKPPLAVRYKLDTNALEMESTEGKS HGSTLERLLAWEKKLYEEVKARESVKIEHEKKLSTLQSLEYKGRDSAKLDKTKASINKLQ SLIVVTSQAATTTSSAIVRVRDNELAPQLVQLCFALLGMWRSMNHFHEIQNEIVQQVRGL VDSSMAESTSDLHRLATRDLEAAVAAWHSNFDRLIKYQRDYIRSLYGWLKLTLCQVDSCV PQGAHASMISRELTSFCDEWKQALDRLPDAVASEAIKSFVNVVHVIYAKQAEEMKVKKRA EAYSKELEKKTNSLRSVEKKYYQSYSMVGLGLPGSGGHGGIDSHAYDARDPLAEKKTEIA QCRRKVEDEMARHAKAIEVTRSMTLNNIQTGLPGIFQAIAGFSGTVVEALDVVCRRAGSV R

Transcript Sequence

Transcript ID	Zm00001d000039_T001
Transcript Infomation	cdna contig:B73_RefGen_v4:B73V4_ctg182:516538:520597:-1 gene:Zm00001d000039 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGGGTGCACGGCGTCCAAGGTGGAGCAGGAGGACACGGTCCGGCGCTGCAAGGAGCGC CGCCGCCACATGAAGGACGCGGTGGCGGCGCGCCAACTGCTAGCCTCCGCGCACGCCGAC TACCTTCGCTCCCTCCGCGTCACCGCCGCCGCGCTCTCGCGCTTCGCGCAGGGCCACCCC TCGCTCGCCGTTTCGCACCACACTGCCCCCGTCCTCCTCTCCGCCGCCGCGCCGCCGCCC GCCCCCATCGCCGTCCATGCGTTCCCCACACCGGCGCCCTCCACCGCTGCGTCGTCATCG CTCCCGCCTCCGACGCCGCTCGTCCAGCGCCCACACCCGCCGCCCCAGCCGCCCACGGCG GCGGCGATGGCGGCGCCGCAGCCGGCGCTGGCGAGGGCACCACGCCCACGGCGGCTCAGG GTGCCCCACATCCTGTCGGACTCCAGCGTGACCAGCCCCGCGCAGCCGTCATTCCGCAAG CAGCCGCCAGTGGGAACACCATCCTCCTCGTCCGCATGGGACTGGGAGAACTTCTACCCG CCGTCGCCGCCAGACTCCGAGTTCTTCGACCGCCGGAAGGCCGAGGTCGAGCAGGCCAGC CGCCTCCGGGAGCTCGAGGAGGAGGAGAAGGCCCGAGCCTACCTCCACCATCACACCCAC TACAACCTCAAGGAAGAAGACGAGGCCGCTGAAGACGACGACGGTGAGGTGGACCATGAA CCAGATGGGATGCATTCCGGCGGATGGGAGGACGACGAGCACTACGCGTCCACGACCACG TCGGAGACCAGATCGGACGAGGAGGGCGAGATGGGGGACAGATCGGAATGCGGGTTCGCG GCCAGATCAGAGTGCGGGTTCGTGGCCAGATCGGAGTACGGCGGGACGGCACCGTCAGAG TACGCCGCCGTACCATTGCCCCTGAGGAGGGATGAAAGGTCGGAGGCTGGCGACTTCTCC ACTGTCATGGCGGCGACAGAGATGCGGATGGTGGTGCGTCATCGCACCCTCGCGGAAATC GTGGCGGCCATTGAGGAGTACTTTGTCAAGGCAGCCGACTCCGGCAACGATGTGTCCGAG CTTCTGGAGGCCAGCCGCGCACAACTCGACCGCAACTTCCGGCAGCTTAAAAAGACGGGT TACCATTCCAACAGCGTGCTATCAGCATTCTCATCGACGTGGACGTCAAAACCGCCATTG GCTGTACGATACAAGTTGGACACTAATGCACTGGAGATGGAGTCAACGGAAGGGAAGAGT CATGGATCCACTCTAGAGCGGCTTTTGGCTTGGGAGAAGAAGCTCTACGAGGAGGTCAAG GCAAGGGAGAGTGTGAAGATTGAGCATGAGAAAAAGCTTTCTACTCTGCAGAGCCTGGAA TACAAAGGGAGGGATAGTGCAAAGCTGGATAAGACCAAGGCCTCCATAAACAAGCTGCAA TCACTGATTGTTGTTACCTCTCAGGCTGCCACAACTACATCATCAGCCATCGTTAGAGTC CGTGACAATGAGCTTGCACCACAGCTTGTTCAGCTCTGTTTTGCGCTATTGGGCATGTGG AGGTCAATGAACCATTTCCATGAGATACAGAATGAGATTGTTCAGCAAGTCCGTGGTCTG GTGGACAGCTCCATGGCTGAGTCAACATCTGACCTCCACAGGCTTGCAACTCGTGACCTT GAGGCTGCTGTTGCGGCGTGGCACTCCAACTTCGACCGCCTCATCAAGTATCAGCGCGAC TACATCCGCTCTCTGTATGGCTGGCTGAAGCTCACACTCTGCCAGGTGGATAGCTGTGTG CCACAGGGAGCCCATGCCTCGATGATCTCGCGCGAACTCACCAGCTTCTGTGACGAGTGG AAGCAAGCACTAGACCGTCTTCCAGACGCTGTTGCTTCGGAGGCGATCAAGAGCTTTGTG AACGTTGTCCATGTCATCTACGCCAAGCAGGCAGAGGAGATGAAGGTGAAGAAGCGGGCA GAGGCATACTCGAAGGAGCTAGAAAAGAAAACCAACTCGCTCAGGTCCGTCGAGAAGAAG TACTACCAGTCCTACTCGATGGTCGGCCTTGGCCTTCCTGGCAGCGGCGGGCACGGTGGC ATTGACAGCCACGCGTACGACGCCCGTGATCCTCTTGCGGAGAAGAAAACCGAGATCGCC CAGTGCCGTCGGAAGGTGGAGGACGAGATGGCGAGGCACGCTAAGGCCATCGAGGTCACG CGGTCAATGACGCTGAACAACATCCAGACAGGCCTGCCGGGTATATTCCAAGCCATAGCT GGTTTCTCAGGGACAGTGGTTGAAGCTCTTGACGTGGTGTGCCGCCGAGCTGGGTCAGTG CGGTAGGACCTCTTGCCCCACCAGAATTACCAAGAGACCATCCTTTCTCTCTCTGGGTGA TTCAGTAGTTTACTTATATAGGGAAACTGCAAAATATAATATAATATAATATATAGCTCA AAGTAGAGTGATGGAATATAGGAGAAGGCTCCTGGATGTTTTTCCCTGTCAGGATGGTTT CGGTTGTAGATAATGTGATTTTGCCCATGATTTGTTGATCTCATCTGGCCCTTTCTCTGG GAAGTGGGAAGGGAGATACATAATGTACATACATTAAGGTCACCTTGCACTCTAGCGTTG ATCAAGCCTGTGCTTCTGCCTAACAAAAGCGTTAACTTTCTTT