Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000020_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:1370542:1371450:-1 gene:Zm00001d000020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase 4 chloroplastic
Sequence

ATGTATACTCTGATCCCGCGCTGCCACCTCCAGCCAGTCCACCGGTCGCCGCCGCCCTGC
CAGGCAGCAACGACGACGTCATCGGCGCCGCCGTCGCCGTCGCCATCACTGTCCATCCGG
TTCCGCCCCGACCAGGACGAGCTGCGGTCGACGTGGCCGCAGCGCGCGTGGACGCTGGCG
GGCACGGCGGCCATCCTCTCCTCCCTGTCCACGTCCGCCTCCCTCGCGGCCTCGGGCTCC
GGCTCGCCCGCGGAGCCAATCGCCGCGGCGCTGGCGGCCTACTCCCTCGCAGACCTCGCC
ACGGGAGTCTACCACTGGTTCGTCGACAACTACGGCGACGCCGCCACGCCCGTGTTCGGC
TCCCAGATCGCCGCGTTCCAGGGCCACCACCGCTACCCGTCCACCATCACGCTGCGGGAG
ACATGCAACAACCTGCACGCGCTAGCGCGCGGCGCCGCGCTCGCGCTCGCCCCCGTCGAC
GCCGCGCTCTCCGCCACGGGCGCGCCAGCCGCCGCGCACGCGTTCGTCGGCGCCTTCACG
GCGTGCGTCGTGCTGAGCCAGCAGTTCCACGCGTGGGCGCACGAGAAGCGCCGCAGGCTG
CCGCCCGGCGTCGAGGCGCTGCAGGACGCCGGCGTGCTCGTGTCGCGCGCGCAGCACGCC
GCGCACCACCGCCAGCCGTACAACACCAACTACTGCATCGTCAGCGGCATGTGGAACGGG
CTGCTTGACAGATACAAGGTGTTCGAGGCGCTGGAGATGGTCGTCTACTTCCGCACCGGC
ATCCGCCCGCGGTCGTGGGGCGAAACCGACGCCTCGTGGAAGGAGGACACCGGCGCTGAA
GCTGCCGCCGCCGCCGCCAGTAATGCTGGTCTGTTACAGACAGCGGGCATCAGCTCTGAC
TCTGACTGA

Peptide Sequence

PEP ID

Zm00001d000020_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:1370542:1371450:-1 gene:Zm00001d000020 transcript:Zm00001d000020_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase 4 chloroplastic
Sequence

MYTLIPRCHLQPVHRSPPPCQAATTTSSAPPSPSPSLSIRFRPDQDELRSTWPQRAWTLA
GTAAILSSLSTSASLAASGSGSPAEPIAAALAAYSLADLATGVYHWFVDNYGDAATPVFG
SQIAAFQGHHRYPSTITLRETCNNLHALARGAALALAPVDAALSATGAPAAAHAFVGAFT
ACVVLSQQFHAWAHEKRRRLPPGVEALQDAGVLVSRAQHAAHHRQPYNTNYCIVSGMWNG
LLDRYKVFEALEMVVYFRTGIRPRSWGETDASWKEDTGAEAAAAAASNAGLLQTAGISSD
SD

Transcript Sequence

Transcript ID

Zm00001d000020_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:1370542:1371450:-1 gene:Zm00001d000020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase 4 chloroplastic
Sequence

ATGTATACTCTGATCCCGCGCTGCCACCTCCAGCCAGTCCACCGGTCGCCGCCGCCCTGC
CAGGCAGCAACGACGACGTCATCGGCGCCGCCGTCGCCGTCGCCATCACTGTCCATCCGG
TTCCGCCCCGACCAGGACGAGCTGCGGTCGACGTGGCCGCAGCGCGCGTGGACGCTGGCG
GGCACGGCGGCCATCCTCTCCTCCCTGTCCACGTCCGCCTCCCTCGCGGCCTCGGGCTCC
GGCTCGCCCGCGGAGCCAATCGCCGCGGCGCTGGCGGCCTACTCCCTCGCAGACCTCGCC
ACGGGAGTCTACCACTGGTTCGTCGACAACTACGGCGACGCCGCCACGCCCGTGTTCGGC
TCCCAGATCGCCGCGTTCCAGGGCCACCACCGCTACCCGTCCACCATCACGCTGCGGGAG
ACATGCAACAACCTGCACGCGCTAGCGCGCGGCGCCGCGCTCGCGCTCGCCCCCGTCGAC
GCCGCGCTCTCCGCCACGGGCGCGCCAGCCGCCGCGCACGCGTTCGTCGGCGCCTTCACG
GCGTGCGTCGTGCTGAGCCAGCAGTTCCACGCGTGGGCGCACGAGAAGCGCCGCAGGCTG
CCGCCCGGCGTCGAGGCGCTGCAGGACGCCGGCGTGCTCGTGTCGCGCGCGCAGCACGCC
GCGCACCACCGCCAGCCGTACAACACCAACTACTGCATCGTCAGCGGCATGTGGAACGGG
CTGCTTGACAGATACAAGGTGTTCGAGGCGCTGGAGATGGTCGTCTACTTCCGCACCGGC
ATCCGCCCGCGGTCGTGGGGCGAAACCGACGCCTCGTGGAAGGAGGACACCGGCGCTGAA
GCTGCCGCCGCCGCCGCCAGTAATGCTGGTCTGTTACAGACAGCGGGCATCAGCTCTGAC
TCTGACTGA