Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000018_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:1299165:1300252:-1 gene:Zm00001d000018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 8
Sequence

ATGGTGTCCTCCAACTTTTATCTTCTCAGCGTTCTTCTCATCGCCATCGCTTCTGGCGCA
CGGGCTACGGATCCTAGTCCTCTCCAAGACTTCTGCGTTGCAGACAAAGAATCGACAGTA
CGTGTGAATGGGTTGCCCTGCAAGGATATTAAGGATGTCAAGGTGGACGACTTCTTCCTA
GCAGCCGACCTCGACAAGCCAAGGGATACGACGACGAACAAGGTCAAGTCAAATGTCACG
TTGATCAATGTGATGAAGCTGGCCGGTCTAAACACCTTAGGCATCTCCATGGCCAGGATT
GACTATGCCCCTCAAGGACAGAACCCACCACATACTCATCCCCGTGCCACTGAGATCTTA
ACGGTTCTTGAAGGATCACTCTATGTGGGTTTTGTCACATCTAACCCAGACAACAAATTC
TTTAGCAAGCTGCTCAACAAGGGTGATGTTTTCGTGTTCCCACAAGGCCTAATCCACTTT
CAGTTCAATCCAAGTCATGACAAGCCAGCAGTTGCCCTCGCCGCACTCAGCAGCCAGAAC
CCTGGTGCCATTACCATTTCTAATGCAGTATTTGGATCAAAACCACCAATCGCGGATGAT
GTTCTTGCCAAGGCGTTTCAGGTGGACAAGAAGGTTGTGGACTGGCTCCAAGCTCAGTTT
TGGGAGGACAACCATAACTAA

Peptide Sequence

PEP ID

Zm00001d000018_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:1299165:1300252:-1 gene:Zm00001d000018 transcript:Zm00001d000018_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 8
Sequence

MVSSNFYLLSVLLIAIASGARATDPSPLQDFCVADKESTVRVNGLPCKDIKDVKVDDFFL
AADLDKPRDTTTNKVKSNVTLINVMKLAGLNTLGISMARIDYAPQGQNPPHTHPRATEIL
TVLEGSLYVGFVTSNPDNKFFSKLLNKGDVFVFPQGLIHFQFNPSHDKPAVALAALSSQN
PGAITISNAVFGSKPPIADDVLAKAFQVDKKVVDWLQAQFWEDNHN

Transcript Sequence

Transcript ID

Zm00001d000018_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:1299165:1300252:-1 gene:Zm00001d000018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 8
Sequence

CCAGCTCGCCATAGCTGATTCATATACAATACAAGCATCCTCTCCGAGGGCAGATCGATA
GAAATGGTGTCCTCCAACTTTTATCTTCTCAGCGTTCTTCTCATCGCCATCGCTTCTGGC
GCACGGGCTACGGATCCTAGTCCTCTCCAAGACTTCTGCGTTGCAGACAAAGAATCGACA
GTACGTGTGAATGGGTTGCCCTGCAAGGATATTAAGGATGTCAAGGTGGACGACTTCTTC
CTAGCAGCCGACCTCGACAAGCCAAGGGATACGACGACGAACAAGGTCAAGTCAAATGTC
ACGTTGATCAATGTGATGAAGCTGGCCGGTCTAAACACCTTAGGCATCTCCATGGCCAGG
ATTGACTATGCCCCTCAAGGACAGAACCCACCACATACTCATCCCCGTGCCACTGAGATC
TTAACGGTTCTTGAAGGATCACTCTATGTGGGTTTTGTCACATCTAACCCAGACAACAAA
TTCTTTAGCAAGCTGCTCAACAAGGGTGATGTTTTCGTGTTCCCACAAGGCCTAATCCAC
TTTCAGTTCAATCCAAGTCATGACAAGCCAGCAGTTGCCCTCGCCGCACTCAGCAGCCAG
AACCCTGGTGCCATTACCATTTCTAATGCAGTATTTGGATCAAAACCACCAATCGCGGAT
GATGTTCTTGCCAAGGCGTTTCAGGTGGACAAGAAGGTTGTGGACTGGCTCCAAGCTCAG
TTTTGGGAGGACAACCATAACTAAGTGAAGCTTGTGCGCTATTGTCATTGTTTTATGCAC
CTATGTAACAATCAACAACATTAATTTGATTTATTTGTATTATGTAGCAAAGTACTATGT
ACTTGATGCCATATATATTCTATAAAATGTTAAATGACCTCAGTTATAAATGTTAAATGA
TATAT