Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000017_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:1171438:1172477:1 gene:Zm00001d000017 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein

Sequence

ATGGCATCCTCCAGCTTTTATCTTCTCAGCGTTCTTCTCATCGTGATCGCTTCTTGCGCC
TGGGCTACGGATCCTAGTCCTCTCCAGGACTTCTGCGTTGCAGACAAAGAATCGCCTGTA
CGTGTGAATGGGTTTCCCTGCAAGGATGTTAAGGATGTCAAGGTCGACGACTTCTTCCTA
GCAGCCGACCTCGACAAGCCAAGGGATACGACGATGAGCAAGGTCAAGTCAAATGTCACA
TTGATCAATGTGATGAAGCTGGCCGGCCTAAACACCTTGGGCATCTCCATGGCTAGGATT
GACTATGCCCCTCAAGGACAGAACCCACCACATACGCATCCTCGTGCCACTGAGATCTTA
ACTGTTCTTGAAGGATCACTCTATGTTGGTTTTGTCACATCTAACCCAGACAACAAATTC
ATTAGCAAGCTACTCAACAAGGGAGATGTTTTCGTGTTCCCACAAGGTCTAATCCACTTT
CAGTTCAATCCAAGTCATGACAAGCCAGCAGTTGCCATTGCCGCACTCAACAGCCAAAAC
CCTGGTGCCATTACCATTTCTAACGCAGTATTTGGTTCGAAACCACCAATCGCGGACAAC
GTTCTTGCCAAGGCATTTCAGGTGGACAAGAAGGTTGTGGATTGGCTCCAAGCTCAGTTT
TGGGAGGACAACCATAACTAA

Peptide Sequence

PEP ID

Zm00001d000017_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:1171438:1172477:1 gene:Zm00001d000017 transcript:Zm00001d000017_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein

Sequence

MASSSFYLLSVLLIVIASCAWATDPSPLQDFCVADKESPVRVNGFPCKDVKDVKVDDFFL
AADLDKPRDTTMSKVKSNVTLINVMKLAGLNTLGISMARIDYAPQGQNPPHTHPRATEIL
TVLEGSLYVGFVTSNPDNKFISKLLNKGDVFVFPQGLIHFQFNPSHDKPAVAIAALNSQN
PGAITISNAVFGSKPPIADNVLAKAFQVDKKVVDWLQAQFWEDNHN

Transcript Sequence

Transcript ID

Zm00001d000017_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:1171438:1172477:1 gene:Zm00001d000017 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein

Sequence

ACTACGTTCAGGGTAGATAGAAATGGCATCCTCCAGCTTTTATCTTCTCAGCGTTCTTCT
CATCGTGATCGCTTCTTGCGCCTGGGCTACGGATCCTAGTCCTCTCCAGGACTTCTGCGT
TGCAGACAAAGAATCGCCTGTACGTGTGAATGGGTTTCCCTGCAAGGATGTTAAGGATGT
CAAGGTCGACGACTTCTTCCTAGCAGCCGACCTCGACAAGCCAAGGGATACGACGATGAG
CAAGGTCAAGTCAAATGTCACATTGATCAATGTGATGAAGCTGGCCGGCCTAAACACCTT
GGGCATCTCCATGGCTAGGATTGACTATGCCCCTCAAGGACAGAACCCACCACATACGCA
TCCTCGTGCCACTGAGATCTTAACTGTTCTTGAAGGATCACTCTATGTTGGTTTTGTCAC
ATCTAACCCAGACAACAAATTCATTAGCAAGCTACTCAACAAGGGAGATGTTTTCGTGTT
CCCACAAGGTCTAATCCACTTTCAGTTCAATCCAAGTCATGACAAGCCAGCAGTTGCCAT
TGCCGCACTCAACAGCCAAAACCCTGGTGCCATTACCATTTCTAACGCAGTATTTGGTTC
GAAACCACCAATCGCGGACAACGTTCTTGCCAAGGCATTTCAGGTGGACAAGAAGGTTGT
GGATTGGCTCCAAGCTCAGTTTTGGGAGGACAACCATAACTAAGTGAAGGAGGCTATTGC
CCTTGTTTTTACACACCGATGTAATAAGTAACAACATTGTTTTCATTCATTTGTTTGATG
TATCAAACTACTATATACCTTTTGCCATACATATATTCTGTTAAAATGTCAAATGACCAC
AGTTATAAACGTGAAATCTTATATTGATT