Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000006_T001
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:478489:479634:1 gene:Zm00001d000006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 11

Sequence

ATGGCTGCGTCCTCGTACTTCCTTCTTGCTGCTTTTCTAGCGGTGGTTGCTTCCCATGCC
ACCGCTTCCGATCCTAGCCCGCTCCAGGATTTCTGTGTTGCGGACATGCACTCTCCTGTG
AAGGTGAATGGATTTGTTTGCAAGGACTCCATGGCCGTGACCGCAGATGACTTCTTCAAA
GCAGCCAATCTTGATAAGGCTAGAGACACCATGAAGAGCAAGGTGGGATCCAATGTCACT
TTGATCAACGTCATCCAGCTCCCTGGCCTCAACACTCTTGGCATCTCCCTGGCACGTATC
GACTACGCGCCATTGGGCGAGAACCCGCCGCACACCCACCCACGTGCCACGGAGATCCTC
ACGGTTCTTGAGGGGACACTCTACGTCGGGTTTGTCACCTCCAACCCAAACAAGCTATTT
GCCAAGGTGCTCAACAAGGGTGATGTGTTCGTATTCCCCCAAGGTCTCATCCATTTCCAA
TTCAACCCGGTCTATAACAAGCCGGCCGTTGCTATCGCGGCGCTCAGCAGCCAGAACCCT
GGGGTTATTACCATCGCCAATGCGGTCTTCGGATCAAAGCCACCGATTTCGGATGATGTC
TTGGCAAAGGCTTTCCAGGTGGAGAAGGGGACAATTGATTGGCTCCAGGCTCAATTCTGG
GAGAACAACCACTACTAA

Peptide Sequence

PEP ID

Zm00001d000006_P001
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:478489:479634:1 gene:Zm00001d000006 transcript:Zm00001d000006_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 11

Sequence

MAASSYFLLAAFLAVVASHATASDPSPLQDFCVADMHSPVKVNGFVCKDSMAVTADDFFK
AANLDKARDTMKSKVGSNVTLINVIQLPGLNTLGISLARIDYAPLGENPPHTHPRATEIL
TVLEGTLYVGFVTSNPNKLFAKVLNKGDVFVFPQGLIHFQFNPVYNKPAVAIAALSSQNP
GVITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQFWENNHY

Transcript Sequence

Transcript ID

Zm00001d000006_T001
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:478489:479634:1 gene:Zm00001d000006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Germin-like protein subfamily 1 member 11

Sequence

AAAGCAACAACAGAAGCAAACATAATTAAGCAGTTGGTGGTCATTAGCGTACTGCACAGA
GTGCCTACAGAAAAGCTAGAGAAGTAAACAAAATGGCTGCGTCCTCGTACTTCCTTCTTG
CTGCTTTTCTAGCGGTGGTTGCTTCCCATGCCACCGCTTCCGATCCTAGCCCGCTCCAGG
ATTTCTGTGTTGCGGACATGCACTCTCCTGTGAAGGTGAATGGATTTGTTTGCAAGGACT
CCATGGCCGTGACCGCAGATGACTTCTTCAAAGCAGCCAATCTTGATAAGGCTAGAGACA
CCATGAAGAGCAAGGTGGGATCCAATGTCACTTTGATCAACGTCATCCAGCTCCCTGGCC
TCAACACTCTTGGCATCTCCCTGGCACGTATCGACTACGCGCCATTGGGCGAGAACCCGC
CGCACACCCACCCACGTGCCACGGAGATCCTCACGGTTCTTGAGGGGACACTCTACGTCG
GGTTTGTCACCTCCAACCCAAACAAGCTATTTGCCAAGGTGCTCAACAAGGGTGATGTGT
TCGTATTCCCCCAAGGTCTCATCCATTTCCAATTCAACCCGGTCTATAACAAGCCGGCCG
TTGCTATCGCGGCGCTCAGCAGCCAGAACCCTGGGGTTATTACCATCGCCAATGCGGTCT
TCGGATCAAAGCCACCGATTTCGGATGATGTCTTGGCAAAGGCTTTCCAGGTGGAGAAGG
GGACAATTGATTGGCTCCAGGCTCAATTCTGGGAGAACAACCACTACTAAATAAATCACA
TATAGCTTATCGTATCAAAGAATGCTTTTAAATATGCACTTTGAGTAATACAACTACATG
ATTTGAGTTTTCATGGTAAAATAGGCCCTAAAATAAGAAGGTAGAATTTCGAGTGTTTTG
GGTGCTATTTTGTATCGCATGCTTCTTGGTGCAATGACCTCTATGGAAGTTCGAAATAAT
AA