Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000005_T003
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:272063:274539:-1 gene:Zm00001d000005 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin heavy chain-related
Sequence

ATGGCACTGCCATTCATGCATATACCGAGACATCTACAAGCTCACCTCCTGCGCAAGAAT
CCTCTTACTTACCACCGTAGTTTCAAAAAAGACATTTCAAGCCCCAACTCCGTCCTGGAG
CCACATAGTGAAGAGCTCCACAAGATACATCTTGGTCTTTCCTCTGGTGTGGAGGATGCA
ACAAAATGGGAGCATATAAACATAAAGAGCATAGAACCAGATGGTGCCTATGTGATTGCT
AGCCAACTAAATCTCGTTGAGGAACAGCAAGGGGGTAGCTATGTTGCTAGCCTTGAGTTG
GAGCTTCAGCAGGCACGGGATAGAGTGAGCAAGCTAGAAGCTGAGCGGTTTTCAGCCAAG
AAGCAACTGAATCACTTGTTCAAGAAACTTGCAGAGGAGAAAGCAGCTTGGCGGAACAGA
GAGCACAAGAAAGTTCAAGCCATTCTTGAAGATATGAAGGCTGATCTGGAGCATGAGAAA
AAGAACCGGAGGCAGTTGGAGACTATTAACTTCAAGCTTGTTGATGAGTTGAAAGAGGTC
AAAATGGCCGCGAAGCAGCTATTGCAAGAGTATGACAACGAGCAGAAGACGCGGGAACTC
ACGGATGAGGTGTGCAACAAGCTAGTGAGGGAGATAGAGGAACACAAGTCAGAGATCGAA
GCCTTGAAGCAGGATTCTGTCAAACTACGCGGCGACCTGGATGAGGATAGGAAATTGCTA
CAGATGGCTGAGGTGTGGCGTGAGGAGCGAGTGCAGATGAAACTTGTCGATGCCAAGCTC
ACTCTTGAGGCCAAATATGAACAGTTGAGCAAACTGCAGGAGGAGGTGGAGGCTTTCATT
TTGACTTTCAGCTCTTCCAAAGGAGACAGCACAATTGTTGAAGCCGCACACAACATTGTA
CAGGCCATTGGGTCGGCCAGAGACCAAGAGGTTGAATTCACATATGAGCCACCAAGAGCA
TCAGAAGATATACTGGCCATCTTTGAAGAGCTACGCCCAAGTGAAGAGATGGAGAAAAAG
GAAACCGAACCATGCCTAAAGCAAGAAATCCAAGAAGCTAGCCCAACAGCTGATATATTT
CTGGAAAATCGAGCCAGATTGTTCCCAGATGGAAGCCATTCTGATGAGAGCGATAAGGAA
GATGGAAGCAGCTGGGAGACCATGAGCCATGAAGAGATGCAAGGCTCAAGCCATTCGCCG
TATGAAAGTGAACATTCAGTCAACAAGATCTTTGACAGAATTTCGTGGACCAGTGGAAAT
GATTCTGAGGGTGAGCAGGCCAACAAACTGTGTGATGACTTGAGCAGTGTGTACCTGACG
GACATGGAACAGTCCAAGAAGAAAGAGTCCGCCATATCAAAGCTGTGGAAGTCATCTCCA
CTGAAAAACTGTGAATTCCGTACAAAAGATGTTGCGGATATGATAAATGGGAGATTATCA
AGTGCAAGTCTTCCAAATGGTGTGTACTCTACTGCCAAAGGCTTGAATCTAGATATGGGG
GACAGCACCCCTAGCACCACGCAATGGAGCTCACCGGATTCGATGAACAGCCAGCTCAAC
CGGGGTTTCAGAGGTTGCATGGAGATGGTTCAGAGGCAGAGCCTGAAGGCGAAGCTCCTT
GAAGCTCGGATGGAGAGCCAGAAGATTCAGCTCCGCCATGTGCTCAACCAGAAAACTTAA

Peptide Sequence

PEP ID

Zm00001d000005_P003
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:272063:274539:-1 gene:Zm00001d000005 transcript:Zm00001d000005_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin heavy chain-related
Sequence

MALPFMHIPRHLQAHLLRKNPLTYHRSFKKDISSPNSVLEPHSEELHKIHLGLSSGVEDA
TKWEHINIKSIEPDGAYVIASQLNLVEEQQGGSYVASLELELQQARDRVSKLEAERFSAK
KQLNHLFKKLAEEKAAWRNREHKKVQAILEDMKADLEHEKKNRRQLETINFKLVDELKEV
KMAAKQLLQEYDNEQKTRELTDEVCNKLVREIEEHKSEIEALKQDSVKLRGDLDEDRKLL
QMAEVWREERVQMKLVDAKLTLEAKYEQLSKLQEEVEAFILTFSSSKGDSTIVEAAHNIV
QAIGSARDQEVEFTYEPPRASEDILAIFEELRPSEEMEKKETEPCLKQEIQEASPTADIF
LENRARLFPDGSHSDESDKEDGSSWETMSHEEMQGSSHSPYESEHSVNKIFDRISWTSGN
DSEGEQANKLCDDLSSVYLTDMEQSKKKESAISKLWKSSPLKNCEFRTKDVADMINGRLS
SASLPNGVYSTAKGLNLDMGDSTPSTTQWSSPDSMNSQLNRGFRGCMEMVQRQSLKAKLL
EARMESQKIQLRHVLNQKT

Transcript Sequence

Transcript ID

Zm00001d000005_T003
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:272063:274539:-1 gene:Zm00001d000005 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin heavy chain-related
Sequence

AAGTGACATGTGTTCAGTTCCCACTTGAGCTTCTTGGTTGCAATGGCACTGCCATTCATG
CATATACCGAGACATCTACAAGCTCACCTCCTGCGCAAGAATCCTCTTACTTACCACCGT
AGTTTCAAAAAAGACATTTCAAGCCCCAACTCCGTCCTGGAGCCACATAGTGAAGAGCTC
CACAAGATACATCTTGGTCTTTCCTCTGGTGTGGAGGATGCAACAAAATGGGAGCATATA
AACATAAAGAGCATAGAACCAGATGGTGCCTATGTGATTGCTAGCCAACTAAATCTCGTT
GAGGAACAGCAAGGGGGTAGCTATGTTGCTAGCCTTGAGTTGGAGCTTCAGCAGGCACGG
GATAGAGTGAGCAAGCTAGAAGCTGAGCGGTTTTCAGCCAAGAAGCAACTGAATCACTTG
TTCAAGAAACTTGCAGAGGAGAAAGCAGCTTGGCGGAACAGAGAGCACAAGAAAGTTCAA
GCCATTCTTGAAGATATGAAGGCTGATCTGGAGCATGAGAAAAAGAACCGGAGGCAGTTG
GAGACTATTAACTTCAAGCTTGTTGATGAGTTGAAAGAGGTCAAAATGGCCGCGAAGCAG
CTATTGCAAGAGTATGACAACGAGCAGAAGACGCGGGAACTCACGGATGAGGTGTGCAAC
AAGCTAGTGAGGGAGATAGAGGAACACAAGTCAGAGATCGAAGCCTTGAAGCAGGATTCT
GTCAAACTACGCGGCGACCTGGATGAGGATAGGAAATTGCTACAGATGGCTGAGGTGTGG
CGTGAGGAGCGAGTGCAGATGAAACTTGTCGATGCCAAGCTCACTCTTGAGGCCAAATAT
GAACAGTTGAGCAAACTGCAGGAGGAGGTGGAGGCTTTCATTTTGACTTTCAGCTCTTCC
AAAGGAGACAGCACAATTGTTGAAGCCGCACACAACATTGTACAGGCCATTGGGTCGGCC
AGAGACCAAGAGGTTGAATTCACATATGAGCCACCAAGAGCATCAGAAGATATACTGGCC
ATCTTTGAAGAGCTACGCCCAAGTGAAGAGATGGAGAAAAAGGAAACCGAACCATGCCTA
AAGCAAGAAATCCAAGAAGCTAGCCCAACAGCTGATATATTTCTGGAAAATCGAGCCAGA
TTGTTCCCAGATGGAAGCCATTCTGATGAGAGCGATAAGGAAGATGGAAGCAGCTGGGAG
ACCATGAGCCATGAAGAGATGCAAGGCTCAAGCCATTCGCCGTATGAAAGTGAACATTCA
GTCAACAAGATCTTTGACAGAATTTCGTGGACCAGTGGAAATGATTCTGAGGGTGAGCAG
GCCAACAAACTGTGTGATGACTTGAGCAGTGTGTACCTGACGGACATGGAACAGTCCAAG
AAGAAAGAGTCCGCCATATCAAAGCTGTGGAAGTCATCTCCACTGAAAAACTGTGAATTC
CGTACAAAAGATGTTGCGGATATGATAAATGGGAGATTATCAAGTGCAAGTCTTCCAAAT
GGTGTGTACTCTACTGCCAAAGGCTTGAATCTAGATATGGGGGACAGCACCCCTAGCACC
ACGCAATGGAGCTCACCGGATTCGATGAACAGCCAGCTCAACCGGGGTTTCAGAGGTTGC
ATGGAGATGGTTCAGAGGCAGAGCCTGAAGGCGAAGCTCCTTGAAGCTCGGATGGAGAGC
CAGAAGATTCAGCTCCGCCATGTGCTCAACCAGAAAACTTAAGTTAGAACCGCACTGTGT
CGAAATAAAATTCCAAGCATTGGATTTATTACATTTCCCTTGTCCATTGTAGTATGTAGC
TTAATCTCATGTGTTTCTGCTTCATAGAACTATATAGCTAGCTATAGCCTTGTAGGCTGA
CCTGGCCATGGTTGATGCAGCTGTCTAATTGTGGCAGTACATTTGACAGGTTATGTGCCC
GTCTTTATGTGTAATGTGGCAGTAAACTGTAAACCAGAAGCATTATTCAGACTAACTGTA
CCAGTACTGTAGCAGGCTGGCAAC