Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d000001_T002
CDS Infomation

cds contig:B73_RefGen_v4:B73V4_ctg150:48840:51164:-1 gene:Zm00001d000001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyphenol oxidase1 description: polyphenol oxidase1
Sequence

ATGGCGAGCGCCTGCGCCACCTCCATCCCCCTCGTCTCGGCGCCCTCTGCATGCCCGTCC
AAGAAGACCACCGTCGCCAGGTTCCGGCGCCGCACGGCGACGTGCAGGGCCAGCAGCGGC
GGTGGCGGTGGCCGGGGCGGCGAAAATGATGGCCTCCTTTGGCTGCCCCGGCGGGACGTG
ATGCTCAACGGCCTGTCCAGTGTCGCCGCCGGGCTCGCCTGGTACCCGGGCGTCGCGTCC
GGCGCGGATGCGGTGTGCACCAGGGCCGACAAGGTGAACGAGAAGACCGTGCAGTGCACG
GACCCGGCCGGGCAGCTTCCGTGCCCTCTGGTGTCGCCGACGGACCCCGTGGACTTCAAG
CCGGAAAGCAAGGTGACGCGCATCCGGCAGCCGGTGCATCTCCTGAGCCGGGAGTACCAG
GAGAAGTACAAGGAGGCCGTCGCGAAGATGAAGGCGCTACCGGAAGAGAACCCGCTGAGC
TTCGCGGCCCAGGCGGCCATCCACCAGGCTTACTGCGACGCCTACTACAAGTACGACCCG
ACGGCCAAGGACGCGCCGTTCGACGTGCACTTCTCGTGGATCTTCGCGCCGTGGCACCGC
ATGTACATCTACTTCTACGAGCGCGCCCTCGGGCAGCTCATCGGCGACGACACCTTCGCG
CTGCCGTTCTGGAACTGGGACACGCCGGCCGGCATGGTGGTGCCGCCACTCTTCAAGGAC
TCCATGGGCAACCCGCTGTACGACCCCAACAGGAACCCGTCGAACGTCGACGCGCTGGTG
GACTTAGACTACCTCAACGACAGGAATGCGGAGCCCATCCCTTTCAAGGGCCCACGGGAC
GAAAAGTACAAGGAACTTGTGAACAAGAACCTGTGCACCGTATACACCCAGCAAATACGT
AGCGGCAAGGGCGCCGAGTCGTTCCTGGGCGAGAAGTACTGCACCGACATCGGGTCAAGC
ACGAGCAGCATGGGTTCGCTGGAGCGGATGGCGCACACTGCCGTGCACGTCTGGGTCGGC
AAGGCGGGCCCGACGCCTTCCTCGGAGGCGTGCAGTGCCGCTACCGGCGGCTTCCCGAAC
CACACCAAAGGCGGGTACAGCTGCAACAACGACATGGGGTTCCTGGGGTCGGCGGGACAC
GACCCGCTCTTCTACTCGCACCACTCCAACGTCGACCGCATGTGGCACATCTGGTCGACC
AGGCTCGGCGGCGGGCAGGGCATCACGGAGGCGGACTGGCTCGACACCAGCTTCGTCTTC
TACGACGACGTCAAGAGCCCGCGGAAGGTGCGCATCAGGTTCCGCGACGTCCTGGACACG
CGCGACCTCGGCTACACGTACGACGCCGAGTCCGACAAGGACCTGCCATGGCTGCGCTGC
AAGATCTCGTCGCTGGTGCCCCACGGCAAGGACAGCCCGCCGAGGTCGTCGTCGGCAAGG
AAGGCGGCGCCGGTGTTCCCGCTCGCCCTGACTAAGGGCCAGGTGGTGGAAGTGCCGGCC
GTGCCTGTGCCGGCCAAGGACCCGGGGAAGGAGCAGCTGCTGGTGATCGAGGGCATCGAG
TACGACCCCCAGGCGAACAATAAGTTCGACGTCGCCATCAACCTGCCCGCGGACAAAGCG
TTGCAGGTAGGCCCACAGTACAAGGAGTACGCCGGAAGCTTCGCCGTCGTGCCGGGCTCC
GGCGCCGGGAAGACGCGGAAAGTGAAGCTCTCCCTGTGCATCACCGAAGTGCTGTTCGAT
ATCGACGCTGACGGCGATAAAACCGTCGACGTCGTTATCGTGCCGCGCACAAATGCTAAG
ATCACGCTCAACGCTCGCCCCACCATCAAGAATCGGAACTAG

Peptide Sequence

PEP ID

Zm00001d000001_P002
PEP Infomation

pep contig:B73_RefGen_v4:B73V4_ctg150:48840:51164:-1 gene:Zm00001d000001 transcript:Zm00001d000001_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyphenol oxidase1 description: polyphenol oxidase1
Sequence

MASACATSIPLVSAPSACPSKKTTVARFRRRTATCRASSGGGGGRGGENDGLLWLPRRDV
MLNGLSSVAAGLAWYPGVASGADAVCTRADKVNEKTVQCTDPAGQLPCPLVSPTDPVDFK
PESKVTRIRQPVHLLSREYQEKYKEAVAKMKALPEENPLSFAAQAAIHQAYCDAYYKYDP
TAKDAPFDVHFSWIFAPWHRMYIYFYERALGQLIGDDTFALPFWNWDTPAGMVVPPLFKD
SMGNPLYDPNRNPSNVDALVDLDYLNDRNAEPIPFKGPRDEKYKELVNKNLCTVYTQQIR
SGKGAESFLGEKYCTDIGSSTSSMGSLERMAHTAVHVWVGKAGPTPSSEACSAATGGFPN
HTKGGYSCNNDMGFLGSAGHDPLFYSHHSNVDRMWHIWSTRLGGGQGITEADWLDTSFVF
YDDVKSPRKVRIRFRDVLDTRDLGYTYDAESDKDLPWLRCKISSLVPHGKDSPPRSSSAR
KAAPVFPLALTKGQVVEVPAVPVPAKDPGKEQLLVIEGIEYDPQANNKFDVAINLPADKA
LQVGPQYKEYAGSFAVVPGSGAGKTRKVKLSLCITEVLFDIDADGDKTVDVVIVPRTNAK
ITLNARPTIKNRN

Transcript Sequence

Transcript ID

Zm00001d000001_T002
Transcript Infomation

cdna contig:B73_RefGen_v4:B73V4_ctg150:48840:51164:-1 gene:Zm00001d000001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polyphenol oxidase1 description: polyphenol oxidase1
Sequence

GGAGCACTGCAGCTAAAATGGCTTTATATACTACTGGCTTGGCTTGGGCGTCGATGGATG
TGCGTGGCAACGTCCAAAATCCAGACCGCTGGTAGGAGTATCTCGTAGACATTGAACAAC
GGCTGCATGGCGAGCGCCTGCGCCACCTCCATCCCCCTCGTCTCGGCGCCCTCTGCATGC
CCGTCCAAGAAGACCACCGTCGCCAGGTTCCGGCGCCGCACGGCGACGTGCAGGGCCAGC
AGCGGCGGTGGCGGTGGCCGGGGCGGCGAAAATGATGGCCTCCTTTGGCTGCCCCGGCGG
GACGTGATGCTCAACGGCCTGTCCAGTGTCGCCGCCGGGCTCGCCTGGTACCCGGGCGTC
GCGTCCGGCGCGGATGCGGTGTGCACCAGGGCCGACAAGGTGAACGAGAAGACCGTGCAG
TGCACGGACCCGGCCGGGCAGCTTCCGTGCCCTCTGGTGTCGCCGACGGACCCCGTGGAC
TTCAAGCCGGAAAGCAAGGTGACGCGCATCCGGCAGCCGGTGCATCTCCTGAGCCGGGAG
TACCAGGAGAAGTACAAGGAGGCCGTCGCGAAGATGAAGGCGCTACCGGAAGAGAACCCG
CTGAGCTTCGCGGCCCAGGCGGCCATCCACCAGGCTTACTGCGACGCCTACTACAAGTAC
GACCCGACGGCCAAGGACGCGCCGTTCGACGTGCACTTCTCGTGGATCTTCGCGCCGTGG
CACCGCATGTACATCTACTTCTACGAGCGCGCCCTCGGGCAGCTCATCGGCGACGACACC
TTCGCGCTGCCGTTCTGGAACTGGGACACGCCGGCCGGCATGGTGGTGCCGCCACTCTTC
AAGGACTCCATGGGCAACCCGCTGTACGACCCCAACAGGAACCCGTCGAACGTCGACGCG
CTGGTGGACTTAGACTACCTCAACGACAGGAATGCGGAGCCCATCCCTTTCAAGGGCCCA
CGGGACGAAAAGTACAAGGAACTTGTGAACAAGAACCTGTGCACCGTATACACCCAGCAA
ATACGTAGCGGCAAGGGCGCCGAGTCGTTCCTGGGCGAGAAGTACTGCACCGACATCGGG
TCAAGCACGAGCAGCATGGGTTCGCTGGAGCGGATGGCGCACACTGCCGTGCACGTCTGG
GTCGGCAAGGCGGGCCCGACGCCTTCCTCGGAGGCGTGCAGTGCCGCTACCGGCGGCTTC
CCGAACCACACCAAAGGCGGGTACAGCTGCAACAACGACATGGGGTTCCTGGGGTCGGCG
GGACACGACCCGCTCTTCTACTCGCACCACTCCAACGTCGACCGCATGTGGCACATCTGG
TCGACCAGGCTCGGCGGCGGGCAGGGCATCACGGAGGCGGACTGGCTCGACACCAGCTTC
GTCTTCTACGACGACGTCAAGAGCCCGCGGAAGGTGCGCATCAGGTTCCGCGACGTCCTG
GACACGCGCGACCTCGGCTACACGTACGACGCCGAGTCCGACAAGGACCTGCCATGGCTG
CGCTGCAAGATCTCGTCGCTGGTGCCCCACGGCAAGGACAGCCCGCCGAGGTCGTCGTCG
GCAAGGAAGGCGGCGCCGGTGTTCCCGCTCGCCCTGACTAAGGGCCAGGTGGTGGAAGTG
CCGGCCGTGCCTGTGCCGGCCAAGGACCCGGGGAAGGAGCAGCTGCTGGTGATCGAGGGC
ATCGAGTACGACCCCCAGGCGAACAATAAGTTCGACGTCGCCATCAACCTGCCCGCGGAC
AAAGCGTTGCAGGTAGGCCCACAGTACAAGGAGTACGCCGGAAGCTTCGCCGTCGTGCCG
GGCTCCGGCGCCGGGAAGACGCGGAAAGTGAAGCTCTCCCTGTGCATCACCGAAGTGCTG
TTCGATATCGACGCTGACGGCGATAAAACCGTCGACGTCGTTATCGTGCCGCGCACAAAT
GCTAAGATCACGCTCAACGCTCGCCCCACCATCAAGAATCGGAACTAGGAGCTAGTTGCT
ACTAGTGCTCATCAAGCACACTGTACGTACGTACGTATGTACTCGATCGCGTGGTCATTC
ATCGACCATCATCGTTTATATGCTGTCACGCACAGCGCGGGCCGGCCGGTAGGGTGTCGG
CAATAATAAACGCGGCCAGTGTTGCATTATTGTGTGTTTTATTTCACAAGGATTAGGAGC
GAGCCAATGGTAGATTCTAAGGAATAAATAACATTGTTATGAATGATATGGTTATGTTTT