Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93494
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:80698687:80702924:1 gene:SORBI_3001G543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCCCGGGGCCGACGCGTCCTCCCTCGCCGCCGCCGTCCTCGACGCCGCCACGCCC
CCGGCCGCTGCCGCCGCCACATCCAGAGTGATCGACTACCTCTCCCGCCACGCCGACGAC
CAACCGCGGGCCTTCTTCGCCGACGCCTTCCCGTCCCTGCTCTACCGCCTCTTCGTCTCC
GCCCCGTCCTCCCCATCCTTCATCGATCTCGCCGTCGCCGACCCCGCGCTCGCCGACCTC
CTCCTCTCCCTCCTCTCCCCCACCGGCCCGCTCCTCGCCGCCGCCGCCGCCGCAGACCGC
CTCGCCCTCATCCGTTACGTCTTCCCCTCCGAGCGCCTCCCCGACTGGCTCCGCCTCGCC
CTCGGGTCTCCCCCCTCCACCGACCTCGCCTCGCCGCTCCTGTCGCGCCGGGTCGCTTCC
GAGCTCCACCTCTCCGTCTTCGAGTACTACCTCTTCTGGTTCGCCTACTACCCTGTCTCG
TCCGCATCCTCTGCCGCACCCGCCGCATCCGCCTCCAACCCTCGACGCACCTCGCGCGCA
CGCCTCGAGACCTGGGTCTCTACTCTCGCCACCACGGCCATCCGCAAACCCGGTCAGAAG
CCCGAGAGCTCGCTATACCTCAGGCTGCTCTATGCCTACCTCAGGGAGCTCGTGCCAACG
CGCACTCCGCTGGGTAAGATGCCCGGGGGCGGCACCCTGCTCCACCCGCCACCCAGCGAT
GGCACGGATGCTATCGACTCCTTTGCACGGGCCGAGTTCTTCCTTCACACCCTTGTCCAG
TTCTGGCTTGTCGGCGATGACTTCTCCCCTCTCCCTATGCAGACTTGCCATGCACTAGGC
CTGCGGTTACCTTCTCGTGCTCGTGCCGACTTGAGTGAGCGGCCACCATCACCAGGCCTG
GGTGATGCAGTGAAGCTGCTTGTCATGTACCTCAACTGCTGTGATGTCCATGCACTAGTC
GATGCGCGCATACCATCTCCCCAAGGAATGCCAGTGTCCAATGGGTTCTGGAATCCGTTG
ATACAGAGGCCTCTGTACCGGTTTGTACTAAGAACCTTCTTATTCTGCCCCATCGGCACT
GTGATAAAAAATGCGACACAAGTCTTCTCTGTGTGGTTGGCTTACATGGAGCCATGGAAA
GTTACCCAACAGGAGCTGGATGGGTATGGCAAGCAGCAAGCTGGGGGTGAGAAGGAGCCA
CAAACAACCAAGATGGTGTACAATTCATCATGGAGGACATATGTTCTGTCAAATTACTTG
TTCTACAACTCGATGATTGTGCATTTCCTGGGATTTGCGCACAAGTTTATCCATTCTGAT
GTTGCCTCAGTGCTGCTAATGGTACACAAGGTGTTGGAGGTCTTGAGCTCTTCCCCGGAG
CTATTAGGTCTTCTCCATAAAGTGGACGCTGCTTGTCACTCTAGGCTAGTGGCATCATCC
CCAGCATCTGATGAGGTGTTGAAGTATGTGCCATCAATCTGTGAACAGCTAAAGGACTGG
GAGGATGGTTTGTCAGAAAGTGATGGAGATGGGTCATTGTTGCATGAGCATTGGAACTCT
GATCTAAGGCTTTTCAGTTATGATGAGAATGGGGCTTATAATCTTCTTCAGCTACTTCTG
ATCCGAGCAGAGTCAGAGATACTACGCCTTCCAGGTGACACGCAACAAGCACTCCAGACG
CTGGATTCTATCAAGTCACAGATGAAAACAGCCTTCCAGGGCCACATTGAAAGAATTAAT
GGGAATACCTCGTTGGAGAAATCACATAATCAACACCATCAGGTGCGTGGGGAGGTATTC
ACACCTAAGCATCCCAGCTTGAGGAAGGGTTCTTGGGCTGATGTTAAATACAAAGGTGAG
TGGATGAAAAGGCCCATCTCAGAGACTGAAGTGGCCTGGCTTGCAAGGGTTCTGATCCGC
CTCTCTGATTGGTTGAATGATGCCCTGGGGCTTAACTGTGCTGATGCTGAAGGTAGCCCT
GCTGGCGCTACCTACATTCAATTTGATGGCAACGAGCTGAACACGGTGGGCGGGCCAAGG
GATGCTGCGAGAATGGCTCTTGGTGCTGTATGTTCATTGATGGTGCTAGTGGGGCAAGCA
GTACTGAAGGTGATGAGGTCACGCAGGGTGAAGATCAGTCTGAGAGTTTTTGCTTCTAAG
AAGCTGCTCTCAGCCGCTGTTGTGCTCTATGCAGTGGTGGCTGTGACACGGAATGTGTCG
GGCTGA

Peptide Sequence

PEP ID

OQU93494
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:80698687:80702924:1 gene:SORBI_3001G543200 transcript:OQU93494 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPPGADASSLAAAVLDAATPPAAAAATSRVIDYLSRHADDQPRAFFADAFPSLLYRLFVS
APSSPSFIDLAVADPALADLLLSLLSPTGPLLAAAAAADRLALIRYVFPSERLPDWLRLA
LGSPPSTDLASPLLSRRVASELHLSVFEYYLFWFAYYPVSSASSAAPAASASNPRRTSRA
RLETWVSTLATTAIRKPGQKPESSLYLRLLYAYLRELVPTRTPLGKMPGGGTLLHPPPSD
GTDAIDSFARAEFFLHTLVQFWLVGDDFSPLPMQTCHALGLRLPSRARADLSERPPSPGL
GDAVKLLVMYLNCCDVHALVDARIPSPQGMPVSNGFWNPLIQRPLYRFVLRTFLFCPIGT
VIKNATQVFSVWLAYMEPWKVTQQELDGYGKQQAGGEKEPQTTKMVYNSSWRTYVLSNYL
FYNSMIVHFLGFAHKFIHSDVASVLLMVHKVLEVLSSSPELLGLLHKVDAACHSRLVASS
PASDEVLKYVPSICEQLKDWEDGLSESDGDGSLLHEHWNSDLRLFSYDENGAYNLLQLLL
IRAESEILRLPGDTQQALQTLDSIKSQMKTAFQGHIERINGNTSLEKSHNQHHQVRGEVF
TPKHPSLRKGSWADVKYKGEWMKRPISETEVAWLARVLIRLSDWLNDALGLNCADAEGSP
AGATYIQFDGNELNTVGGPRDAARMALGAVCSLMVLVGQAVLKVMRSRRVKISLRVFASK
KLLSAAVVLYAVVAVTRNVSG

Transcript Sequence

Transcript ID

OQU93494
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:80698687:80702924:1 gene:SORBI_3001G543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCCCGGGGCCGACGCGTCCTCCCTCGCCGCCGCCGTCCTCGACGCCGCCACGCCC
CCGGCCGCTGCCGCCGCCACATCCAGAGTGATCGACTACCTCTCCCGCCACGCCGACGAC
CAACCGCGGGCCTTCTTCGCCGACGCCTTCCCGTCCCTGCTCTACCGCCTCTTCGTCTCC
GCCCCGTCCTCCCCATCCTTCATCGATCTCGCCGTCGCCGACCCCGCGCTCGCCGACCTC
CTCCTCTCCCTCCTCTCCCCCACCGGCCCGCTCCTCGCCGCCGCCGCCGCCGCAGACCGC
CTCGCCCTCATCCGTTACGTCTTCCCCTCCGAGCGCCTCCCCGACTGGCTCCGCCTCGCC
CTCGGGTCTCCCCCCTCCACCGACCTCGCCTCGCCGCTCCTGTCGCGCCGGGTCGCTTCC
GAGCTCCACCTCTCCGTCTTCGAGTACTACCTCTTCTGGTTCGCCTACTACCCTGTCTCG
TCCGCATCCTCTGCCGCACCCGCCGCATCCGCCTCCAACCCTCGACGCACCTCGCGCGCA
CGCCTCGAGACCTGGGTCTCTACTCTCGCCACCACGGCCATCCGCAAACCCGGTCAGAAG
CCCGAGAGCTCGCTATACCTCAGGCTGCTCTATGCCTACCTCAGGGAGCTCGTGCCAACG
CGCACTCCGCTGGGTAAGATGCCCGGGGGCGGCACCCTGCTCCACCCGCCACCCAGCGAT
GGCACGGATGCTATCGACTCCTTTGCACGGGCCGAGTTCTTCCTTCACACCCTTGTCCAG
TTCTGGCTTGTCGGCGATGACTTCTCCCCTCTCCCTATGCAGACTTGCCATGCACTAGGC
CTGCGGTTACCTTCTCGTGCTCGTGCCGACTTGAGTGAGCGGCCACCATCACCAGGCCTG
GGTGATGCAGTGAAGCTGCTTGTCATGTACCTCAACTGCTGTGATGTCCATGCACTAGTC
GATGCGCGCATACCATCTCCCCAAGGAATGCCAGTGTCCAATGGGTTCTGGAATCCGTTG
ATACAGAGGCCTCTGTACCGGTTTGTACTAAGAACCTTCTTATTCTGCCCCATCGGCACT
GTGATAAAAAATGCGACACAAGTCTTCTCTGTGTGGTTGGCTTACATGGAGCCATGGAAA
GTTACCCAACAGGAGCTGGATGGGTATGGCAAGCAGCAAGCTGGGGGTGAGAAGGAGCCA
CAAACAACCAAGATGGTGTACAATTCATCATGGAGGACATATGTTCTGTCAAATTACTTG
TTCTACAACTCGATGATTGTGCATTTCCTGGGATTTGCGCACAAGTTTATCCATTCTGAT
GTTGCCTCAGTGCTGCTAATGGTACACAAGGTGTTGGAGGTCTTGAGCTCTTCCCCGGAG
CTATTAGGTCTTCTCCATAAAGTGGACGCTGCTTGTCACTCTAGGCTAGTGGCATCATCC
CCAGCATCTGATGAGGTGTTGAAGTATGTGCCATCAATCTGTGAACAGCTAAAGGACTGG
GAGGATGGTTTGTCAGAAAGTGATGGAGATGGGTCATTGTTGCATGAGCATTGGAACTCT
GATCTAAGGCTTTTCAGTTATGATGAGAATGGGGCTTATAATCTTCTTCAGCTACTTCTG
ATCCGAGCAGAGTCAGAGATACTACGCCTTCCAGGTGACACGCAACAAGCACTCCAGACG
CTGGATTCTATCAAGTCACAGATGAAAACAGCCTTCCAGGGCCACATTGAAAGAATTAAT
GGGAATACCTCGTTGGAGAAATCACATAATCAACACCATCAGGTGCGTGGGGAGGTATTC
ACACCTAAGCATCCCAGCTTGAGGAAGGGTTCTTGGGCTGATGTTAAATACAAAGGTGAG
TGGATGAAAAGGCCCATCTCAGAGACTGAAGTGGCCTGGCTTGCAAGGGTTCTGATCCGC
CTCTCTGATTGGTTGAATGATGCCCTGGGGCTTAACTGTGCTGATGCTGAAGGTAGCCCT
GCTGGCGCTACCTACATTCAATTTGATGGCAACGAGCTGAACACGGTGGGCGGGCCAAGG
GATGCTGCGAGAATGGCTCTTGGTGCTGTATGTTCATTGATGGTGCTAGTGGGGCAAGCA
GTACTGAAGGTGATGAGGTCACGCAGGGTGAAGATCAGTCTGAGAGTTTTTGCTTCTAAG
AAGCTGCTCTCAGCCGCTGTTGTGCTCTATGCAGTGGTGGCTGTGACACGGAATGTGTCG
GGCTGAGGCCTGAGGTCTTTGCCTCTTTGGGAGAGTTTTGATTTGATACCAGCAGCAATG
GGGTTATGCTGTATAAGCTGTACAGGAAGTCGTTCGGTAGGGGAAAAAGAACAGAAAAGA
TGATGGCGCTAACAAAGTGTACTACCTGTTTGTTAACTGTGTTGTTGTGGACCTTACTGT
TCTTCTGCTGTTGTCCAGTAAGTTTGATGAGAGAGAGAGGGAGAGAGAGAGTGATTGACG
TTACCTGCATGTAAAGGCCTGCACTGCAATGTACTTGCTGTTTTTTGGGCTTAATTGCAA
TGTATTTAGCGCAGCTCTGGCTCGTACAATAGAATGTTTTATTCATTAAGAGGGAGAATG
AT