Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93418
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:79968301:79976378:-1 gene:SORBI_3001G536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGAGCCCTCGCCGCCGCCGGCGTCGAACGCTGGCCTCCGTATCCTCCTGTCGAAG
GACCGACCGGCTCCTTCCCCGCCACCCACCGCCGCCGTTTCCAGCCACGCCGACCGCGAC
CGCATCATCGGAGTTTTCCGGAGCGCGTTGTCTAGGAATGAACCCCCAGAAACATTTTCT
CTTCAGACAGTTCAGGAAGCAATTAAACCTCAGAAGGAAACCGTGTTGGTTCTAGAGGAG
AACCAATCCTTGGAAAATGCTCTTCGAACATTGCTGCAGGAGCTTGTGTCATCTGCAGTC
CAATCGGGTAAAAAGATCATGCAATATGGGAATTCCTTGGATAGTGGAGAAAGTAACTGC
CCAATAACTCGCCTTCTTGATATTGTGCTTTATCTTTGTGAAAGAGGGCATGTTGAGGGT
GGTATGGTATTCCAGCTGTTGGAAGACCTAACTGAAATGTCAACAATCAAAGACTGCAAA
GATATCTTTGGGTATATTGAGAGTCAACAAGATGTACTGGGAAAGCAAGAACTTTTTGGA
CGTGGGAAACTAGTTATGCTAAGGACTTGCAACCAACTTCTTCGCAGACTATCGAAGGCA
AATGATGTGGTGTTCTGCGGGCGCATTATTATGTTTCTAGCACATTTTTTCCCATTATCC
GAGCGTTCAGCTCTCAACATTAAAGGAGTTTTCAACACGTCAAATGTAACCAAGTATGAA
AAGGATGCTATGGATGGAATCTCTGTTGATTTCAACTTCTACAAGACCCTCTGGAGTCTA
CAGGAACATTTCAGTAACCCAGCTTTGACTAATACAAATCCAGCAAAATGGCAAAAGTTC
TCTTCCAATTTGGCGGTTGTGTTGAGCACATTTGAAGCTCAACCTCTTAGCGACGATGAT
GGAAAACTTAACAATCTCAACGAGGAGGAAGACGCCGCTTTCAATATTAAGTACCTGACT
AGCAGTAAATTAATGGGTTTAGAGTTGAAGGACCCAAGTTTTCGACGCCACATCCTTGTT
CAGTGCCTTATATTTTTTGACTATCTCAAGGCGCCTGGAAAAAATGACAAAGAAGGTCCA
ACAGGGAGCATGAAAGAGGAAATCAAATCTTGTGAAGAGCATGTTAAGAAGCTTCTGGAA
ATTATTCCCCCAAAAGGAAAGGAATTTCTTAAAAGCATTGAACATATTCTTGAGCGGGAG
AAAAATTGGGTTTGGTGGAAGCGAGATGGGTGTCTTGCATTTGAAAAACCACCCTTTGAG
AAGAAACCAGGTCAGGCTGGAGGTAGAAAACGGAAGCCAAGGTGGAGACTGGGAAACAAA
GAGCTCAGCCAACTTTGGAAATGGGCAGAACAAAACCCTAATGTTTTGACTGATCCTGAC
CGTGTCCGCATGCCATCAATTACGGAATATTGGAAACCACTTGCAGAAGATATGGATCCA
TCTGCTGGAATTGAAGAGGAGTACCACCACAAAAGTAATCGGGTGTACTGTTGGAAAGGA
CTACGGTTTTCGGCCAGGCAAGACTTGGATGGTTTTGCTCGGTTTTCAGACTACGGGATC
GAAGGAGTTGTACCTTCAGAACTCCTTCCACCTGAAGTAAATGCTAGGTTTTCTTCTAAG
CCTGCCGAAAAGGTTAAGCGGACGAGAAGGGAAGATTCAAAAGGCATGTCAGCTCAACCC
AAAGAGCAGCAGGTTGCTGCGACACCAGAAACCGATGGCGGTGGCAGTGGTGGCGATCCA
GAAGAAGGGGCGGCACCAATGGATTCCGACAACGGCGGGGTGGAGGATAGTCAGAAACGG
AGCCCAGGGGAGGTCTCTGGCCCTGAAAGCGGGCAGTGCGAGCCTGAGGCGGATGCCGAT
GATAACGTGAAGACTGAAACCACCAGTACTGCGAGACTCGAGTTGAGACGTTAG

Peptide Sequence

PEP ID

OQU93418
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:79968301:79976378:-1 gene:SORBI_3001G536400 transcript:OQU93418 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEPSPPPASNAGLRILLSKDRPAPSPPPTAAVSSHADRDRIIGVFRSALSRNEPPETFS
LQTVQEAIKPQKETVLVLEENQSLENALRTLLQELVSSAVQSGKKIMQYGNSLDSGESNC
PITRLLDIVLYLCERGHVEGGMVFQLLEDLTEMSTIKDCKDIFGYIESQQDVLGKQELFG
RGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNVTKYE
KDAMDGISVDFNFYKTLWSLQEHFSNPALTNTNPAKWQKFSSNLAVVLSTFEAQPLSDDD
GKLNNLNEEEDAAFNIKYLTSSKLMGLELKDPSFRRHILVQCLIFFDYLKAPGKNDKEGP
TGSMKEEIKSCEEHVKKLLEIIPPKGKEFLKSIEHILEREKNWVWWKRDGCLAFEKPPFE
KKPGQAGGRKRKPRWRLGNKELSQLWKWAEQNPNVLTDPDRVRMPSITEYWKPLAEDMDP
SAGIEEEYHHKSNRVYCWKGLRFSARQDLDGFARFSDYGIEGVVPSELLPPEVNARFSSK
PAEKVKRTRREDSKGMSAQPKEQQVAATPETDGGGSGGDPEEGAAPMDSDNGGVEDSQKR
SPGEVSGPESGQCEPEADADDNVKTETTSTARLELRR

Transcript Sequence

Transcript ID

OQU93418
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:79968301:79976378:-1 gene:SORBI_3001G536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTGCCCCGCACGGCGCATCTGTTCCTTCTGCTCTGCGACTGCGAAGCCTCCGCGCTCGT
ATCGTAGCCTGTTCGTCGCCGCTGCTGCCTTCCGGTGCTTGCCGCCGCTCTTATCTTGTT
CCGGCACCGCGTCAAAGGGCCGTTCCTCTCTACACTAGGCGCCTGGTAGATCTCCCCAAC
TCAACCGGGCAAGCCTTACCGCCCACTTCACTATGGCGGAGCCCTCGCCGCCGCCGGCGT
CGAACGCTGGCCTCCGTATCCTCCTGTCGAAGGACCGACCGGCTCCTTCCCCGCCACCCA
CCGCCGCCGTTTCCAGCCACGCCGACCGCGACCGCATCATCGGAGTTTTCCGGAGCGCGT
TGTCTAGGAATGAACCCCCAGAAACATTTTCTCTTCAGACAGTTCAGGAAGCAATTAAAC
CTCAGAAGGAAACCGTGTTGGTTCTAGAGGAGAACCAATCCTTGGAAAATGCTCTTCGAA
CATTGCTGCAGGAGCTTGTGTCATCTGCAGTCCAATCGGGTAAAAAGATCATGCAATATG
GGAATTCCTTGGATAGTGGAGAAAGTAACTGCCCAATAACTCGCCTTCTTGATATTGTGC
TTTATCTTTGTGAAAGAGGGCATGTTGAGGGTGGTATGGTATTCCAGCTGTTGGAAGACC
TAACTGAAATGTCAACAATCAAAGACTGCAAAGATATCTTTGGGTATATTGAGAGTCAAC
AAGATGTACTGGGAAAGCAAGAACTTTTTGGACGTGGGAAACTAGTTATGCTAAGGACTT
GCAACCAACTTCTTCGCAGACTATCGAAGGCAAATGATGTGGTGTTCTGCGGGCGCATTA
TTATGTTTCTAGCACATTTTTTCCCATTATCCGAGCGTTCAGCTCTCAACATTAAAGGAG
TTTTCAACACGTCAAATGTAACCAAGTATGAAAAGGATGCTATGGATGGAATCTCTGTTG
ATTTCAACTTCTACAAGACCCTCTGGAGTCTACAGGAACATTTCAGTAACCCAGCTTTGA
CTAATACAAATCCAGCAAAATGGCAAAAGTTCTCTTCCAATTTGGCGGTTGTGTTGAGCA
CATTTGAAGCTCAACCTCTTAGCGACGATGATGGAAAACTTAACAATCTCAACGAGGAGG
AAGACGCCGCTTTCAATATTAAGTACCTGACTAGCAGTAAATTAATGGGTTTAGAGTTGA
AGGACCCAAGTTTTCGACGCCACATCCTTGTTCAGTGCCTTATATTTTTTGACTATCTCA
AGGCGCCTGGAAAAAATGACAAAGAAGGTCCAACAGGGAGCATGAAAGAGGAAATCAAAT
CTTGTGAAGAGCATGTTAAGAAGCTTCTGGAAATTATTCCCCCAAAAGGAAAGGAATTTC
TTAAAAGCATTGAACATATTCTTGAGCGGGAGAAAAATTGGGTTTGGTGGAAGCGAGATG
GGTGTCTTGCATTTGAAAAACCACCCTTTGAGAAGAAACCAGGTCAGGCTGGAGGTAGAA
AACGGAAGCCAAGGTGGAGACTGGGAAACAAAGAGCTCAGCCAACTTTGGAAATGGGCAG
AACAAAACCCTAATGTTTTGACTGATCCTGACCGTGTCCGCATGCCATCAATTACGGAAT
ATTGGAAACCACTTGCAGAAGATATGGATCCATCTGCTGGAATTGAAGAGGAGTACCACC
ACAAAAGTAATCGGGTGTACTGTTGGAAAGGACTACGGTTTTCGGCCAGGCAAGACTTGG
ATGGTTTTGCTCGGTTTTCAGACTACGGGATCGAAGGAGTTGTACCTTCAGAACTCCTTC
CACCTGAAGTAAATGCTAGGTTTTCTTCTAAGCCTGCCGAAAAGGTTAAGCGGACGAGAA
GGGAAGATTCAAAAGGCATGTCAGCTCAACCCAAAGAGCAGCAGGTTGCTGCGACACCAG
AAACCGATGGCGGTGGCAGTGGTGGCGATCCAGAAGAAGGGGCGGCACCAATGGATTCCG
ACAACGGCGGGGTGGAGGATAGTCAGAAACGGAGCCCAGGGGAGGTCTCTGGCCCTGAAA
GCGGGCAGTGCGAGCCTGAGGCGGATGCCGATGATAACGTGAAGACTGAAACCACCAGTA
CTGCGAGACTCGAGTTGAGACGTTAGTTAGTACATCCTGCAGTGGTGATTGGATTGGATT
TGGATGTAAAGTGGCTGTTTCGTAGCTGTATGTGTAATTGTTGCCCTGCAGTTGTTGTTT
ATTCAGCAGGAGTATAGGCAGAGGCTCAAGCTCAACCGGCGTCTGCCCGCTTGTCTGATC
ATATTTACAGTAGTAGATCTGGAAATGAAATTAGATTGTTTGTTTATTTATTTATTTATT
TATTGTCCACAATAAATTTGAGATCCCGGCGAGCCTTTTCAAATGGTAACAGGAACAAGT