Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93334
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78715630:78722779:1 gene:SORBI_3001G522100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCCCCGCCGTCGCCGCAGCGGGGTCCTCGCCTCGCAGGTGGCTCGCGGCGGCCGTC
ATCGCGCTCGCCTGTGCCCTCGCGCCGGCGGCCGCTAGGCCTGACAAGGAGATGCGGGAG
AAGTTCTACGGGACGCTCGTCACCAACGGCACGCACAACGCTACCGGGGACGGCAGCATC
GCCGAGATGTTCGGCCGCGTGCTCGACAAGGAGTTCTCCGACAGCGACACGCCCGACGCT
CCTGACAAGAGTAGCTTCAACAACAGCGTGTCAGATCATCAAGCTGTTCTGGAGACAGTA
GCTGTCATTACACATGACAAGAAGAAGAATGATTCGCAGCATACTAATTCCCCAAAATCT
TTCCAAATTGGTGACATGTTTGGAGGCCAGGATGAGAACTCTGATGACTTGGAAACTGTG
ATAGATAAAGAGGATAATGTTTTTGTGATGTCAAATCGTAAAACGAAGTATCCAACTCTT
CAACTAGATTTACGATTGATTAAAGATCTAGTAATTATAATCGTTTCAGCTACTGGTGGT
GGTATCATATTCTCTTGTATGGGGCAGCCGGTTATTGTTGGCTACCTACTTGCTGGTTCT
CTAGTTGGACCTGGGGGTTTGAACTTTATCAATGAAATGGTGCAGGTGGAGACTTTTGCT
CAATTTGGTGTAGTGTTTCTTCTTTTTGCTCTTGGTCTTGAGTTTTCACTGACTAAGTTG
AAAGCTGTAGGTCCTGTTGCTGTACTCGGAGGTCTGCTTCAGATTGCTCTGTTCATGTTC
TTGTGTGGCCTCACTGCAGCGTTGTGTGGTGCTAAATCATCTGAAGGAGTGTTTGTTGGT
GCCTTCTTGTCTATGTCATCTACTGCAGTGGTTTCAAAGTTTTTAGTGGAAAAAGGTAGT
ACAAACACACTTCATGGTCAAGTTACAATCGGAACCCTTATACTTCAGGATTGTGCAGTG
GGCTTGCTGTTTGCTCTCCTTCCTGTTCTTGGAGGTGCTAGTGGCATTTTCGGAGGAGTG
ATGTCAATGGCGAAACTGTTGCTTGTGTTATCCATATTTGTAGCTGTTACGTATATGATG
ACATGGTCAATTGTTCCTCGATTCTTAAAACTGATGATTCAGTTATCTTCACAGACAAAT
GAACTCTACCAACTGGCCTCCGTTGCATTTTGCTTGCTTCTAGCCTGGTGCAGTGACTAT
TGTGGATTGAGTCTTGAATTGGGGTCATTCCTTGCTGGCGTTATGATATCAACCACAGAT
TTTGCTCATCATACTATGGAGCAGGTCGAACCCATTCGCAATCTATTTGCAGCGCTCTTC
CTTGCAAGCATTGGAATGCTCATACATGTTAAGTTCTTGTGGAATCATGTTGACATATTA
CTTGCAGCTGTTATACTGGTTATAATAGTAAAGAGCATTGTTGTAACTATTGTTGTAAAG
GCATTTGGATACAGCATCAGAACAGCTTTTGTTGTTGGGCTGTCCTTAGCTCAGATAGGA
GAGTTTGCTTTTGTGCTTTTGAGCCGTGCCTCCCATCTCCATCTTGTTGGGGGGAAAATG
TATCTACTATTACTGGGAACAACTGCCCTTAGCTTGGTAACAACTCCTCTCATTTTCAAA
CTAATTCCTGTGGTAATGCACCTTGGCATCCTTATGCGTTGGTTCCCCTCGGAAAACAGT
ATGCAGAGTGAGCTTCCATTACAGGATAAAGCGGTTATGCTTGAAGCTCACAACAGATCA
CTCTAA

Peptide Sequence

PEP ID

OQU93334
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78715630:78722779:1 gene:SORBI_3001G522100 transcript:OQU93334 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPAVAAAGSSPRRWLAAAVIALACALAPAAARPDKEMREKFYGTLVTNGTHNATGDGSI
AEMFGRVLDKEFSDSDTPDAPDKSSFNNSVSDHQAVLETVAVITHDKKKNDSQHTNSPKS
FQIGDMFGGQDENSDDLETVIDKEDNVFVMSNRKTKYPTLQLDLRLIKDLVIIIVSATGG
GIIFSCMGQPVIVGYLLAGSLVGPGGLNFINEMVQVETFAQFGVVFLLFALGLEFSLTKL
KAVGPVAVLGGLLQIALFMFLCGLTAALCGAKSSEGVFVGAFLSMSSTAVVSKFLVEKGS
TNTLHGQVTIGTLILQDCAVGLLFALLPVLGGASGIFGGVMSMAKLLLVLSIFVAVTYMM
TWSIVPRFLKLMIQLSSQTNELYQLASVAFCLLLAWCSDYCGLSLELGSFLAGVMISTTD
FAHHTMEQVEPIRNLFAALFLASIGMLIHVKFLWNHVDILLAAVILVIIVKSIVVTIVVK
AFGYSIRTAFVVGLSLAQIGEFAFVLLSRASHLHLVGGKMYLLLLGTTALSLVTTPLIFK
LIPVVMHLGILMRWFPSENSMQSELPLQDKAVMLEAHNRSL

Transcript Sequence

Transcript ID

OQU93334
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78715630:78722779:1 gene:SORBI_3001G522100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCTCCGCTTGCCGCCGCCTCGTGCTCGCGCGATCGGACGGCGACTCCACCGCGCCAACC
GATCTCCTCTCTCCGACTCTCCCCCGCGCCCGCGGCGAGAAATAAAAGAGATCCCCGACC
CCGACGCGCCACCCGCAAATCTCGCTCTCCCGGCCGCCCGCCCGCCGCCACCCCGCCCGC
CTCGGCCGCACCCGCACGCAATCCGATGGCCCCCGCCGTCGCCGCAGCGGGGTCCTCGCC
TCGCAGGTGGCTCGCGGCGGCCGTCATCGCGCTCGCCTGTGCCCTCGCGCCGGCGGCCGC
TAGGCCTGACAAGGAGATGCGGGAGAAGTTCTACGGGACGCTCGTCACCAACGGCACGCA
CAACGCTACCGGGGACGGCAGCATCGCCGAGATGTTCGGCCGCGTGCTCGACAAGGAGTT
CTCCGACAGCGACACGCCCGACGCTCCTGACAAGAGTAGCTTCAACAACAGCGTGTCAGA
TCATCAAGCTGTTCTGGAGACAGTAGCTGTCATTACACATGACAAGAAGAAGAATGATTC
GCAGCATACTAATTCCCCAAAATCTTTCCAAATTGGTGACATGTTTGGAGGCCAGGATGA
GAACTCTGATGACTTGGAAACTGTGATAGATAAAGAGGATAATGTTTTTGTGATGTCAAA
TCGTAAAACGAAGTATCCAACTCTTCAACTAGATTTACGATTGATTAAAGATCTAGTAAT
TATAATCGTTTCAGCTACTGGTGGTGGTATCATATTCTCTTGTATGGGGCAGCCGGTTAT
TGTTGGCTACCTACTTGCTGGTTCTCTAGTTGGACCTGGGGGTTTGAACTTTATCAATGA
AATGGTGCAGGTGGAGACTTTTGCTCAATTTGGTGTAGTGTTTCTTCTTTTTGCTCTTGG
TCTTGAGTTTTCACTGACTAAGTTGAAAGCTGTAGGTCCTGTTGCTGTACTCGGAGGTCT
GCTTCAGATTGCTCTGTTCATGTTCTTGTGTGGCCTCACTGCAGCGTTGTGTGGTGCTAA
ATCATCTGAAGGAGTGTTTGTTGGTGCCTTCTTGTCTATGTCATCTACTGCAGTGGTTTC
AAAGTTTTTAGTGGAAAAAGGTAGTACAAACACACTTCATGGTCAAGTTACAATCGGAAC
CCTTATACTTCAGGATTGTGCAGTGGGCTTGCTGTTTGCTCTCCTTCCTGTTCTTGGAGG
TGCTAGTGGCATTTTCGGAGGAGTGATGTCAATGGCGAAACTGTTGCTTGTGTTATCCAT
ATTTGTAGCTGTTACGTATATGATGACATGGTCAATTGTTCCTCGATTCTTAAAACTGAT
GATTCAGTTATCTTCACAGACAAATGAACTCTACCAACTGGCCTCCGTTGCATTTTGCTT
GCTTCTAGCCTGGTGCAGTGACTATTGTGGATTGAGTCTTGAATTGGGGTCATTCCTTGC
TGGCGTTATGATATCAACCACAGATTTTGCTCATCATACTATGGAGCAGGTCGAACCCAT
TCGCAATCTATTTGCAGCGCTCTTCCTTGCAAGCATTGGAATGCTCATACATGTTAAGTT
CTTGTGGAATCATGTTGACATATTACTTGCAGCTGTTATACTGGTTATAATAGTAAAGAG
CATTGTTGTAACTATTGTTGTAAAGGCATTTGGATACAGCATCAGAACAGCTTTTGTTGT
TGGGCTGTCCTTAGCTCAGATAGGAGAGTTTGCTTTTGTGCTTTTGAGCCGTGCCTCCCA
TCTCCATCTTGTTGGGGGGAAAATGTATCTACTATTACTGGGAACAACTGCCCTTAGCTT
GGTAACAACTCCTCTCATTTTCAAACTAATTCCTGTGGTAATGCACCTTGGCATCCTTAT
GCGTTGGTTCCCCTCGGAAAACAGTATGCAGAGTGAGCTTCCATTACAGGATAAAGCGGT
TATGCTTGAAGCTCACAACAGATCACTCTAATTGCCTAGCTACAACATTCTTTTGACTGA
CAGTGATTTATTTGTGCATCGACTCTTTGCACATGCCATGAAAACATTGGAGAAACAATT
ACACACCAAATCCCCTTTTGCGGCGATATGGGAACACGAAGGGATGGGCAAAGTTAACAG
CTTGGCCAGCCGTGGGGCTCTCCGTATAGCATTCTTTTGATTGGAATTTTGAGTTGTACA
TACTGTACATGTCGTCAAGGTAGCATACAAGGGATCTGTCCATATGAGGAAGGCGCCAAT
GGGCCTTGGTTTTGTATCATTGTTGCCAACTCAATCAGTCTAGGAAGCTAGGTAGGGATT
TTGGTACCTTGTGCTCAAATGTACAATTATTGTCAGAGGATGACGGGAAAGTTGTATGTT
ATGTATTTGCTCTGTTCTTGTGACGACCAATTGACCATGGACACATGAACACATCCTTCA
CGCTATGGTAACGTGGTGTTCACCATATCGATTATTAATATATGTTTGTACTGCC