Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93329
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:78678096:78682986:-1 gene:SORBI_3001G521600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACGCTGCCGGCCAGGCCCCCGCTACCACCGGCCTGAGTGTGAGCCCTTTTCTGCCG
GCAGCGCCCGTGCAGCTAGTCCGGCTGAGGAAGCTGTTGTACCTGCAGGCGTCAGGTACG
GTGCTTGCCGCCGCCGGCGAGGTCTCCGACGGCCTGTTGACAAGCTTCGTATTACTCATG
GCACTACTTTGCTGTGCTGGCGTTGTCGGCATCTGTGTCCTGGGGTGGCTGCTGTTCTGG
CGCCGCAAGGCCGTGACCTCCCTCGAGTTCGATGACCAGGAAGTACTTGACAACCTTTCC
GACAACAATATAATTGGTCGCAGTGAGACAGGAGACCAACTGTACCGGGTCCGTCTTCAG
GACAGCAATGGCAGCGGGCGCTTCAGGTTGGTAACCGTGAAGAAGTTGGAGAACGAGATA
GGAACGGTGGATGACAATCTTAAGAACCGATGCCAGTCCGAGGTAAACAAGCTGGGCGTC
ATCCGTCACGACAACATCATCAGCCTTGTCCACTGTATCGAGAGGGACGACATGATCCTG
CTCTTATACGAGCACATGGAGAATGGCAGGCTTGACGAATGGCTGCTGCACTACCAGCCC
CTGGACCTGGAAGCCAGCGAGCGGCGGCGGCATCGTCCGCCGCTGCGCTGGCGTGAACGG
CGAGCCATTGCCGTCGGCGTGGCCAAAGGACTCTTTCACTTGCACCATGGATGCAACAAA
CCTATCATCCACCGCAACATCAAGCCGAGCAACATCTTGCTCGACGGCGACCTCAATGCC
AAGATCGCTGGTTTCGACCTGGCCCAGATCAACCTTGCTGGACTGAGCCAGCCGTTGAGA
AACTCGGAACTTCCGGCTGATTCCTTTGGGTACACGGCTCCAGAATATGCGACGGTCGAG
GTGAGTGAGAAGGTGGACGTGTACAGCTTTGGTGTGCTGCTGCTGGTCCTCGTTACGGGG
AGACCAGCCAACACACCAGGAGCGCGCGGCCACTTGGCCACTTGGGCACGTGGACACCAC
GACGAACTGATCGCTGCTGGGGAATCCTACCATGAAGCCTTGGGGAGATCAGTCGACATG
GATATCCCGGATCGGGCCAGGCAGTACTTGAAGGAGATGGCTGCCGTGTTCAGGCTCGGT
GTGGATTGCACCGTCGCGGATCCACAGCAGAGGCCGTCCATGCAGACGGTTCTGAGCCGC
CTCCAGAGGTCTTGGTGGCTGTGGGGACGACTGGGACAACAATGCGTCAGCCTATCGTGA

Peptide Sequence

PEP ID

OQU93329
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:78678096:78682986:-1 gene:SORBI_3001G521600 transcript:OQU93329 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHAAGQAPATTGLSVSPFLPAAPVQLVRLRKLLYLQASGTVLAAAGEVSDGLLTSFVLLM
ALLCCAGVVGICVLGWLLFWRRKAVTSLEFDDQEVLDNLSDNNIIGRSETGDQLYRVRLQ
DSNGSGRFRLVTVKKLENEIGTVDDNLKNRCQSEVNKLGVIRHDNIISLVHCIERDDMIL
LLYEHMENGRLDEWLLHYQPLDLEASERRRHRPPLRWRERRAIAVGVAKGLFHLHHGCNK
PIIHRNIKPSNILLDGDLNAKIAGFDLAQINLAGLSQPLRNSELPADSFGYTAPEYATVE
VSEKVDVYSFGVLLLVLVTGRPANTPGARGHLATWARGHHDELIAAGESYHEALGRSVDM
DIPDRARQYLKEMAAVFRLGVDCTVADPQQRPSMQTVLSRLQRSWWLWGRLGQQCVSLS

Transcript Sequence

Transcript ID

OQU93329
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:78678096:78682986:-1 gene:SORBI_3001G521600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGGCAAGCTTTGAGAAACTCTAATCGCTGCTCCTCTTTTCTCCTCCTCCCCTGGCCGG
CAAACCATACCAGCGCGTCTATACACGACAAACGCCAAGAGCTCACCGGCGACCTCGACT
CTAACACCACCGAGACAAGTACACCTCACCGCCGACGACTCGACTTCAACACCACCCTCA
CAGTCTGCTTCGCCTATACCTCGATCTACTTTAACGAAGAACGAGCATCCTCACGTGTTA
CTGCTTCTTCGATCTGTGGTACCTCAACTTCATCGACACCACCATCACCGGCGACCTCGA
GTACTTCGACACCGTCCTCACCGACGACCTCGACTTCTTCTTCGAAAACACTCTCTCGTT
GGCGACCTCGACTTATTCTTGGATAACACCCTCGTCGGCAACCTCGACTTCTTCTTCGAC
AACACCCTCAATGGCGATCTAGACTTCTTCTTGGGCAACACCCTAACCGGCGATCTCGAC
TTCTTCTTGGACAATACTCTCACCGGTGATCTCGACTTCTTTAGCAACCACCTGATCACT
GCTTCTTCTTCGGCAACACCCTCACCGACGACCTCGACTTCTTCTCAACACGACAACACC
CTCACCGGCGACCTTGACTTCTTCTAGAACAACACCCTCACCGGCGACCTCGATCGACTT
CTTCGGCAACATCCTCACAGGCGACCTCAACTTCTTCTTGGACAACACCCTGCCCGGCGA
CCTCGACTTCTTCAACACCATCCTCACCGGTAACCCCGACTTCTTCACCCCTCCATCACC
GGCGGCGACCTTGAGTACTTCAACTCGAGTACTCGGTGGCTAGCTCTTGGGGAAAAAAAA
ACACCACCCTCGGCGGTTGCTTCGCCTAAACCTCTACTTTAACAAACAGCGCGCGAGCAT
CCTCATCCTCACCGGCCGGGAGCGGGATCCGCACGTATTTCCGGCTGCTTCGATCTTCAA
CAACAGATCTCACAGGCGATCCACATATATGGTGCTCTCGGGCTGCTTCCGTTGCCTCAA
CCTCTCCATTAACGGCTTCACGGAACTCTCTCCAACGGCAACCGTCTGAATCGATCTCAG
GTTTGCACACACTTTCCTGCTGGACATTACGTTGTCGCCTTGCTCTTGTCTTGTGTGTGC
ATGCAGCATAATATCCTCGGTGTCCTTAGGGCCAAACAAGCAGCTTGCAGATAGCCCGTA
GAGAGAAAAAAAACAACATATTTTGTATATAGTTGGCTGCTCGAATCGGTGTTTAGGAAA
GAGCATCTGTTCCTTAGGGGCGCATGTGCTCCCACACCGGTGTTCAGTGCGTGGGACTGG
AGGAGTACGTAGAAGCTTGCACCAGCCACCAGAGCGCTTCGAGTGGGAAGAAGGCGTCCC
TCTGTTAAACGATCTTGCGCTGGCGCGTGGTCGATCGTGCGGGCACGTGCCGTTGCCGGC
CGAGTCGTGTGGCGGGTGCAGGGGATGCGTGAGCTAGCGATGGGCGGCCTTGTTCGTCGT
CTGCCGTTCAGCAGAACAATGCCTCCGTCCACGGCCGCCATTCCACCCCCGCGCGCCATT
GCTGCGCCACCGCTGGCCTCCCCCTCTCGGTCCTCAGAACCTACACAGCCGGCCTGCGCC
ACCTGCCGCGGGAGGCATCCCCACGCCTCGCCGCCACCGCCGCCGCGCGCCCGATCCTGT
AGTATTTTCGTTTGTTTGTGGCAAATATTGTCTAATCAGAAACTAACTAGGCTCAAAAGA
TTCGTCTCGTAAATTACAGATAAACTATACAATTAGTTTTTGTTTTGGTCTCGTTTAGTT
CGCAAAATTTTTTGTTTTTGGGTACTGTAGTATTTCGTTTCTATTTGACAAACATTGTCA
AATCACGAAGTAACTAGGCTCAAAAGATTCATCTCACAAATTACAGGTAAAGTGTGCAGT
TAGTTTTTATTTTCGTCTATATTTAATGCTCTATGTATACGATCAAAGATTCGATGTGAC
GGGGAATCTTGAAAATTTTTGCGAACTAAACAAGACCTTAGTGCTTTATACATGTGCTAC
AAGATTTGATGTGACGGAGAATCTTGAAAAGTTTTTGAATTTTGGGTCAACTAAACAAGG
CCCACGCTCAGTCACACAGTTTTCCATGCACGATGATGAGACCAACCTGACAACATCGTT
CGGATGATCATGATCCATACACCAACATATATATATACTCCAGTAATCAATCATTTTTTT
TATTTTTTTTAAAATACTAGTCTCTAGTATATATCTCTGACATAGGTTTGCGTGTCTAGT
TGTACAATTCGGAGGGAGTAGTCCAACCGTAACTATGACGAGTTTATTTCTTTCATATTT
TTTTCTATTCACCCTTTGTCGGAGGAGGGAGTAGTCCAACCTACTATATATGATGAGTTT
ATTTATTTATTTTAGTTTTTTCTATTCACCCTAAGTCATACTAGATGCCAAGTCGCCAGC
ACATATATACTCTCTCCATCCCAAATTGTAAGTCATTCCAAGAATCTTGGAGAGTCAATG
CAATTTCACGTTTGACCAAAATTATAGAGAAAAATACTAAGATTTGTAACGTAAAGTGAG
TATACTATGAAAATATAATTAAGAAAGAATCTAATGATACTTAGTTGGTACCATAATAAT
TATTATTTTATAATATAAATTTGGTCAAATTTAGAAAAGTTTGACTCTCCAAGATTCTTG
GAATGACTTACAATTTGGGATGGAGGGAGTACAATACAGTACGCCTGCTAATGGGTGAGA
TCCCAACCCATTTCCAACCCGCCGTTCCAAATCAAATGAATCATATTTTACGATCCTCCG
GGCCTTGTTTAGATGCAAAAACTTTTTAGATTTTGACACTGTAGCATTTTCGTTTTTATT
TGACAAACATTGTCTAATTATAGAGTAACTAGGCTTAAAAGATTCGTATCATGATTTACA
GGTAAACTGTGCAATTAGTTATCTTTTTTATCTATATTTAATGTTCCATGCAAGTGACGC
AAAATTCGATGCGATGAAGAATCTTGTAAAGTTTTAGGTTTTTGGATGCATCTAAACAAA
TATCCCATCCCAAACCAACTTAATTAGACCGATCAGTTGTCCTAGATCATTCTTCTGGCT
CATTTTATTAATACTCTTTCTCTGTTGTACAAATCGTGGTGCTCAATACAGTACACAACC
ATGCAGGTTGATGCACGCTGCCGGCCAGGCCCCCGCTACCACCGGCCTGAGTGTGAGCCC
TTTTCTGCCGGCAGCGCCCGTGCAGCTAGTCCGGCTGAGGAAGCTGTTGTACCTGCAGGC
GTCAGGTACGGTGCTTGCCGCCGCCGGCGAGGTCTCCGACGGCCTGTTGACAAGCTTCGT
ATTACTCATGGCACTACTTTGCTGTGCTGGCGTTGTCGGCATCTGTGTCCTGGGGTGGCT
GCTGTTCTGGCGCCGCAAGGCCGTGACCTCCCTCGAGTTCGATGACCAGGAAGTACTTGA
CAACCTTTCCGACAACAATATAATTGGTCGCAGTGAGACAGGAGACCAACTGTACCGGGT
CCGTCTTCAGGACAGCAATGGCAGCGGGCGCTTCAGGTTGGTAACCGTGAAGAAGTTGGA
GAACGAGATAGGAACGGTGGATGACAATCTTAAGAACCGATGCCAGTCCGAGGTAAACAA
GCTGGGCGTCATCCGTCACGACAACATCATCAGCCTTGTCCACTGTATCGAGAGGGACGA
CATGATCCTGCTCTTATACGAGCACATGGAGAATGGCAGGCTTGACGAATGGCTGCTGCA
CTACCAGCCCCTGGACCTGGAAGCCAGCGAGCGGCGGCGGCATCGTCCGCCGCTGCGCTG
GCGTGAACGGCGAGCCATTGCCGTCGGCGTGGCCAAAGGACTCTTTCACTTGCACCATGG
ATGCAACAAACCTATCATCCACCGCAACATCAAGCCGAGCAACATCTTGCTCGACGGCGA
CCTCAATGCCAAGATCGCTGGTTTCGACCTGGCCCAGATCAACCTTGCTGGACTGAGCCA
GCCGTTGAGAAACTCGGAACTTCCGGCTGATTCCTTTGGGTACACGGCTCCAGAATATGC
GACGGTCGAGGTGAGTGAGAAGGTGGACGTGTACAGCTTTGGTGTGCTGCTGCTGGTCCT
CGTTACGGGGAGACCAGCCAACACACCAGGAGCGCGCGGCCACTTGGCCACTTGGGCACG
TGGACACCACGACGAACTGATCGCTGCTGGGGAATCCTACCATGAAGCCTTGGGGAGATC
AGTCGACATGGATATCCCGGATCGGGCCAGGCAGTACTTGAAGGAGATGGCTGCCGTGTT
CAGGCTCGGTGTGGATTGCACCGTCGCGGATCCACAGCAGAGGCCGTCCATGCAGACGGT
TCTGAGCCGCCTCCAGAGGTCTTGGTGGCTGTGGGGACGACTGGGACAACAATGCGTCAG
CCTATCGTGATCAACTACTACCATGCATATATCTACCAACAGGTCGGGCCAGGCACCGAG
GATATGTCTCCAAAAAGAAAAGTCCCGGCCGGGGAGTAGTTCACTAGTATAGTAGTAAAC
TTATTATTATCTCCCCGGCCCAACGTCCAAAATCTAAAAAAAAGAAAAACATTACTTAGG
TATATATGCCTTGACGCAAAAAAAAGGTAATAGTCCGTGTGGTCTGTGATTTCGTGTACA
TGCATGTACATATGTGCTTGCTCAAAAAAAAAAAACTTTATGTATTGCTATAATCTATCT
ATATATATTAACCCT