Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93220
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:77077231:77082379:1 gene:SORBI_3001G501900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCACCGCTCGCCGGAGGCGGCGTCGGCCTCCGCCTCCCCGACGGCCGCGGCGGCG
GCGGCCATGGCGCCGGGCGTCGGCGGGGTGGAGCCGGCCGTGACGCTCGACCAGGTCCCG
CGTTGGAGCGACCCGGACCAGCGCATCTCCCCGCTGTCCCCCACTGCCGCCGGATCCGAG
ACTCCGCCCTCGTCCTTCCTCTCCTTCTCCGACCCGCTAACCGGGGACGACGCGGCCGCG
GGGGCCGGGGGCCGTGGCGCGTCGCGGTTCCCCGTCGATCACGAGATCAACTCGAAGATC
TACCTCTGGCGAGGCCACCCGTGGAGCCTCGAGGTCGACGCCGTCGTCAACTCCACCAAC
GAGAACTTGGACGAAGCTCATAGCAGTCCTGGGCTTCACGCTGCTGCAGGGACGGGGCTC
GCCGAGGAGTGTGCCACTTTGGGTGGTTGCCGCACTGGGATGGCTAAGATGACAAATGCT
TATGATCTTCCTGCCAGGAAGGTCATCCATACCGTGGGCCCAAAATATGCTGTAAAGTAT
CACACAGCTGCAGAGAATGCGCTTAGCCACTGCTACAGATCTTGTCTAGAACTTCTCATT
GAGAATGGCCTTGAAAGCATTGCTACTGGCTGCATTTACACAGAAGCCAAGAATTATCCT
CGTGAACCAGCTGCTCATGTGGCAATAAGAACTGTGAGACGTTTCCTGGAGAAACAAAAG
GACAAAATAACAGCTATTGTCTTCTGTACAATATCATCATCTGACACAGAGATATATAAG
AGGTTGCTTCCACTATATTTCCCTCGGGACAAGCAAGAAGAAGAGATAGCCGCATTGAAG
CTTCCAGCTGATGTTGGGGATGAGAATGGTGAGACAGTAATAGACGAAAGGAAAATAAGA
ATAAAGCCCTTGCCTGCTGGGGCAGAAAATAGCAAAACACCAATTCCTACACTTGCAGAT
ATCCCTCTTCCTGATTCGAGATTGACACGTAGAAGGAATTCTTTCAAGTTGGACTCATAT
TTGGATCCTGCTTTTATGTCTATAATTAAGGATCCTGATCTCCGACGCAAGGAGCAATGG
GAAAAATCTGCTCAGGCAAACAAGGGACTTAACTTGGCTAACATGCTTGGGTTTGGTGAT
CTTGGCAGTCCACCATTATCTGCTGCTGAAGAATATTCACTTCATTCACGATACCTTGCT
AAAGCGAATTCTATGAATCTGTCAGATGTTGCTGAAATGAAAATAATTTACCGTGGAGGA
GTTGATAGTGAAGGGCATCCAGTTATGGTCGTTGTTGGTGCTCACTTTCTTCTTCGCTGC
TTGGATCTTGAACGATTTGTTTTATATGTAATAAAGGAGTTTGAACCTCTGATTCAGAAG
CCTTACTCAATTGTCTATTTCCACTCTGCAGCATCATTACAACCGCAGCCTGATTTAGGA
TTCATGAAACGGTTGCAACAGATACTAGGTCGGAAGCATCAAAAAAATCTTCATACAATA
TATATACTCCACCCGACGCTGGGATTGAGAACAGCTGTTATGGCAATGCAGCTTTTTGTT
GACGGGGAGGTCTGGAAGAAAGTTGTATATGTCGACAGACTTGTGCAGCTATTCAGATAT
GTACCGCGTGAACAGCTAACCATTCCTGATTTTGTATTCCAGCATGATCTTGAAGTGAAT
GGTGGAAAGGGCATAATCGTTGACCCAAGAACAAAGCATGTCTACCAGAGACCATCTGGC
TGA

Peptide Sequence

PEP ID

OQU93220
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:77077231:77082379:1 gene:SORBI_3001G501900 transcript:OQU93220 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQHRSPEAASASASPTAAAAAAMAPGVGGVEPAVTLDQVPRWSDPDQRISPLSPTAAGSE
TPPSSFLSFSDPLTGDDAAAGAGGRGASRFPVDHEINSKIYLWRGHPWSLEVDAVVNSTN
ENLDEAHSSPGLHAAAGTGLAEECATLGGCRTGMAKMTNAYDLPARKVIHTVGPKYAVKY
HTAAENALSHCYRSCLELLIENGLESIATGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK
DKITAIVFCTISSSDTEIYKRLLPLYFPRDKQEEEIAALKLPADVGDENGETVIDERKIR
IKPLPAGAENSKTPIPTLADIPLPDSRLTRRRNSFKLDSYLDPAFMSIIKDPDLRRKEQW
EKSAQANKGLNLANMLGFGDLGSPPLSAAEEYSLHSRYLAKANSMNLSDVAEMKIIYRGG
VDSEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPLIQKPYSIVYFHSAASLQPQPDLG
FMKRLQQILGRKHQKNLHTIYILHPTLGLRTAVMAMQLFVDGEVWKKVVYVDRLVQLFRY
VPREQLTIPDFVFQHDLEVNGGKGIIVDPRTKHVYQRPSG

Transcript Sequence

Transcript ID

OQU93220
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:77077231:77082379:1 gene:SORBI_3001G501900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGATCCCCCGAGCTTCGCTCACACCGGTCACCTCCGCCTCCGCCCGCTTCGCGCGCGAAC
GCATCTCCTTCTATCGCTCCAGCCTCCAGCACACATCCCCATGCCCTCGCGGTCCTGATC
CGGCCACAGCCATGCAGCACCGCTCGCCGGAGGCGGCGTCGGCCTCCGCCTCCCCGACGG
CCGCGGCGGCGGCGGCCATGGCGCCGGGCGTCGGCGGGGTGGAGCCGGCCGTGACGCTCG
ACCAGGTCCCGCGTTGGAGCGACCCGGACCAGCGCATCTCCCCGCTGTCCCCCACTGCCG
CCGGATCCGAGACTCCGCCCTCGTCCTTCCTCTCCTTCTCCGACCCGCTAACCGGGGACG
ACGCGGCCGCGGGGGCCGGGGGCCGTGGCGCGTCGCGGTTCCCCGTCGATCACGAGATCA
ACTCGAAGATCTACCTCTGGCGAGGCCACCCGTGGAGCCTCGAGGTCGACGCCGTCGTCA
ACTCCACCAACGAGAACTTGGACGAAGCTCATAGCAGTCCTGGGCTTCACGCTGCTGCAG
GGACGGGGCTCGCCGAGGAGTGTGCCACTTTGGGTGGTTGCCGCACTGGGATGGCTAAGA
TGACAAATGCTTATGATCTTCCTGCCAGGAAGGTCATCCATACCGTGGGCCCAAAATATG
CTGTAAAGTATCACACAGCTGCAGAGAATGCGCTTAGCCACTGCTACAGATCTTGTCTAG
AACTTCTCATTGAGAATGGCCTTGAAAGCATTGCTACTGGCTGCATTTACACAGAAGCCA
AGAATTATCCTCGTGAACCAGCTGCTCATGTGGCAATAAGAACTGTGAGACGTTTCCTGG
AGAAACAAAAGGACAAAATAACAGCTATTGTCTTCTGTACAATATCATCATCTGACACAG
AGATATATAAGAGGTTGCTTCCACTATATTTCCCTCGGGACAAGCAAGAAGAAGAGATAG
CCGCATTGAAGCTTCCAGCTGATGTTGGGGATGAGAATGGTGAGACAGTAATAGACGAAA
GGAAAATAAGAATAAAGCCCTTGCCTGCTGGGGCAGAAAATAGCAAAACACCAATTCCTA
CACTTGCAGATATCCCTCTTCCTGATTCGAGATTGACACGTAGAAGGAATTCTTTCAAGT
TGGACTCATATTTGGATCCTGCTTTTATGTCTATAATTAAGGATCCTGATCTCCGACGCA
AGGAGCAATGGGAAAAATCTGCTCAGGCAAACAAGGGACTTAACTTGGCTAACATGCTTG
GGTTTGGTGATCTTGGCAGTCCACCATTATCTGCTGCTGAAGAATATTCACTTCATTCAC
GATACCTTGCTAAAGCGAATTCTATGAATCTGTCAGATGTTGCTGAAATGAAAATAATTT
ACCGTGGAGGAGTTGATAGTGAAGGGCATCCAGTTATGGTCGTTGTTGGTGCTCACTTTC
TTCTTCGCTGCTTGGATCTTGAACGATTTGTTTTATATGTAATAAAGGAGTTTGAACCTC
TGATTCAGAAGCCTTACTCAATTGTCTATTTCCACTCTGCAGCATCATTACAACCGCAGC
CTGATTTAGGATTCATGAAACGGTTGCAACAGATACTAGGTCGGAAGCATCAAAAAAATC
TTCATACAATATATATACTCCACCCGACGCTGGGATTGAGAACAGCTGTTATGGCAATGC
AGCTTTTTGTTGACGGGGAGGTCTGGAAGAAAGTTGTATATGTCGACAGACTTGTGCAGC
TATTCAGATATGTACCGCGTGAACAGCTAACCATTCCTGATTTTGTATTCCAGCATGATC
TTGAAGTGAATGGTGGAAAGGGCATAATCGTTGACCCAAGAACAAAGCATGTCTACCAGA
GACCATCTGGCTGATCTGTCATGAACCTGCAAATGAGCGCTTCACGGTACCACTCTCTCT
GTAGTCTGTACAGACTCTCTGTCCAGTCCTCTGTAGAAGGTCCTGTCCTCCTCTGTAGAA
GAGTTCCCTTCTAGAGCTGCGCATTTTGTTGCTCTATGCTATTCCTTCTCCTTTTAGGGA
GGCATATTTCTGTATAAACAAATAAATGCCGCATCTAAATGTCTCTCAAGTTGCCTAGAG
CTGGGCGTGCTTATTAGGTACTGTAAAATTTTGACAGGTCCATAGATATTGAGAAATAAG
ATTGCAGTCTGTTCCGTCTCAGTAATTGATCGGCGCTTGGAATGCCTTAATAGGCTGAAG
ACTGATGTGTTTGCTGTTGCAAACAGTAGTAGCAAGTCCTCAAGACGAGGAAGAATAAAA
TCTTGTCTATTTTGCTTTTGGTTAGTTTGACAAAATTTGTGATTCTAATTCTGATCCTGA
GGTTCTCCGTCCAAACATTATACTCTCAATACCTTTTATTATTA