Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93174
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:76355781:76358654:-1 gene:SORBI_3001G494500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTTCAAACCCTAAACCCGCACCGGCACGCGGCGGCCGTCTCCCCGTCGCCGGCG
CCGTCGCCCGTCCCGCGCCGCGGCCACCCGCCGCCGCAGCCTCTCCTGCACCTCCCTCCC
CGCCGCCGCCTCGCGGGCGGCGCCGCCCGGCCGCGCGCCGTCGCTGCCGCCGTCTCGGGG
GCCGTCAACGAGGCCAGGAGGCGTGGGGCGCCGCAGGAGGGCGGGGAGGACGGGAGGAAG
GACACGGACCTCGCCACGCTCGGGAACCTCTGCGTCGACGTCGTGCTCAGCGTGCCCCAG
CTCCCGCCCGCGCCGCGGGAGGAGCGGAAGGCCTACATGGAGCGCCTCGCCGCCTCACCG
CCCGATCAGAAATTTTGGGAGGCTGGTGGAAACTGCAATTTAGCCTTTGCTGCAGCTAGG
CTTGGGCTTAGCTGTTCCACTCTGGGTCATGTAGGAGAGGAAATATATGGAAATTTTCTT
CTTGATGTGCTTCAAGCGGAGGGCATTAGTGTTGTTGGGATGCTTGAAAATACCAATGCT
GCTGCGTGCCGCCAAGCCTATGAAACACTTCTATGTTGGGTTCTTGTAGACCCATTTCAG
AAACATGGTTTTTGCAGCCGTGCAGACTTCAGTGAAGAGCCAGCATTCAGTTGGATACGT
AAACTCCCAGCAGATATCAGGACAGCTATTCATCACTCCAAAATACTGTTTTGCAATGGC
TATGCTTTTGATGAGTTCTTCCCTGATGTGATCGCATCCTCTATCGACTGTGCAATTGAT
TCGGGAACAGCAGTGTTTTTCGATCCTGGTCCCCGTGGGAAATCTCTCTTACATGGGACC
TTGGATGAGCAGAGAGCACTTGAGCATGCGCTCAGGTTCAGTGATGTCCTCCTCTTGACA
TCAGATGAGGCTGAATCTCTAACCACCATCAGAAACCCAGTTCAGGCTGGGCAAGAGTTG
CTAAAGAAAGGGGTCCGCACAAAGCAGGTTGTCATCAAAATGGGTTCCAAGGGTTCGATC
ATGATAACTAAGAGCACTGTTTCCTGCGCGCCTGCTTTCAAGATCAACGTTGTGGACACA
GTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCCTTTGGGTTCCTCCATGACTTGCCA
GCGGTTAACACATTAACCCTAGCAAATGCAGTTGGTGCTGCAACCGCCACTGGCTGTGGG
GCTGGCAGGAATGTTGCTCGCCTGGATAAAGTACTACAGCTCTTGAAAGAAGCCGATCTC
AATGAAGAAGACACATGGACTGAGCTGATTGAAGGAAATTCTCTCTGTATTGAGGTCTCA
ATTATGTCTGGGATGGCAAGAAATGGTTTTGGCGAGCGCATTGTGCATGTTCCTGTTACC
AAAGTGGTTTCCGACATTTTGCCTATGTTCGAAGCAGTGTCAGAGCGAAGCGCTGTCCAG
GCTTGA

Peptide Sequence

PEP ID

OQU93174
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:76355781:76358654:-1 gene:SORBI_3001G494500 transcript:OQU93174 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALQTLNPHRHAAAVSPSPAPSPVPRRGHPPPQPLLHLPPRRRLAGGAARPRAVAAAVSG
AVNEARRRGAPQEGGEDGRKDTDLATLGNLCVDVVLSVPQLPPAPREERKAYMERLAASP
PDQKFWEAGGNCNLAFAAARLGLSCSTLGHVGEEIYGNFLLDVLQAEGISVVGMLENTNA
AACRQAYETLLCWVLVDPFQKHGFCSRADFSEEPAFSWIRKLPADIRTAIHHSKILFCNG
YAFDEFFPDVIASSIDCAIDSGTAVFFDPGPRGKSLLHGTLDEQRALEHALRFSDVLLLT
SDEAESLTTIRNPVQAGQELLKKGVRTKQVVIKMGSKGSIMITKSTVSCAPAFKINVVDT
VGCGDSFTAAIAFGFLHDLPAVNTLTLANAVGAATATGCGAGRNVARLDKVLQLLKEADL
NEEDTWTELIEGNSLCIEVSIMSGMARNGFGERIVHVPVTKVVSDILPMFEAVSERSAVQ
A

Transcript Sequence

Transcript ID

OQU93174
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:76355781:76358654:-1 gene:SORBI_3001G494500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGCGGCCCCCTCCCAAGATGGCGCTTCAAACCCTAAACCCGCACCGGCACGCGGCGGCC
GTCTCCCCGTCGCCGGCGCCGTCGCCCGTCCCGCGCCGCGGCCACCCGCCGCCGCAGCCT
CTCCTGCACCTCCCTCCCCGCCGCCGCCTCGCGGGCGGCGCCGCCCGGCCGCGCGCCGTC
GCTGCCGCCGTCTCGGGGGCCGTCAACGAGGCCAGGAGGCGTGGGGCGCCGCAGGAGGGC
GGGGAGGACGGGAGGAAGGACACGGACCTCGCCACGCTCGGGAACCTCTGCGTCGACGTC
GTGCTCAGCGTGCCCCAGCTCCCGCCCGCGCCGCGGGAGGAGCGGAAGGCCTACATGGAG
CGCCTCGCCGCCTCACCGCCCGATCAGAAATTTTGGGAGGCTGGTGGAAACTGCAATTTA
GCCTTTGCTGCAGCTAGGCTTGGGCTTAGCTGTTCCACTCTGGGTCATGTAGGAGAGGAA
ATATATGGAAATTTTCTTCTTGATGTGCTTCAAGCGGAGGGCATTAGTGTTGTTGGGATG
CTTGAAAATACCAATGCTGCTGCGTGCCGCCAAGCCTATGAAACACTTCTATGTTGGGTT
CTTGTAGACCCATTTCAGAAACATGGTTTTTGCAGCCGTGCAGACTTCAGTGAAGAGCCA
GCATTCAGTTGGATACGTAAACTCCCAGCAGATATCAGGACAGCTATTCATCACTCCAAA
ATACTGTTTTGCAATGGCTATGCTTTTGATGAGTTCTTCCCTGATGTGATCGCATCCTCT
ATCGACTGTGCAATTGATTCGGGAACAGCAGTGTTTTTCGATCCTGGTCCCCGTGGGAAA
TCTCTCTTACATGGGACCTTGGATGAGCAGAGAGCACTTGAGCATGCGCTCAGGTTCAGT
GATGTCCTCCTCTTGACATCAGATGAGGCTGAATCTCTAACCACCATCAGAAACCCAGTT
CAGGCTGGGCAAGAGTTGCTAAAGAAAGGGGTCCGCACAAAGCAGGTTGTCATCAAAATG
GGTTCCAAGGGTTCGATCATGATAACTAAGAGCACTGTTTCCTGCGCGCCTGCTTTCAAG
ATCAACGTTGTGGACACAGTTGGATGTGGAGATAGCTTTACTGCTGCTATAGCCTTTGGG
TTCCTCCATGACTTGCCAGCGGTTAACACATTAACCCTAGCAAATGCAGTTGGTGCTGCA
ACCGCCACTGGCTGTGGGGCTGGCAGGAATGTTGCTCGCCTGGATAAAGTACTACAGCTC
TTGAAAGAAGCCGATCTCAATGAAGAAGACACATGGACTGAGCTGATTGAAGGAAATTCT
CTCTGTATTGAGGTCTCAATTATGTCTGGGATGGCAAGAAATGGTTTTGGCGAGCGCATT
GTGCATGTTCCTGTTACCAAAGTGGTTTCCGACATTTTGCCTATGTTCGAAGCAGTGTCA
GAGCGAAGCGCTGTCCAGGCTTGATTCCATACTGAATAGTAGATTGTTGTATTCATTTTG
TCATTCACATAGATTCTTCTTTTACTCTACGATCACACGCCGTTTTCTGGTGATGAGTGG
TAGTTGGAGGCTAGCCTCCAGGTAAAGCTACTTCCTGAACAGAATGTGGTTGCTGAAGCT
ATTGATAGCTGTACAGCTATGGTTGCGTGGAATGATGGTACCACCTGAAGTTTTGTTCTA
ACATGAACGTGATTGATGCTACAATGT