Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93110
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:75114131:75117646:1 gene:SORBI_3001G478900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACGAACGCCACCCCGCGAGCCCGATCGCGCCGCCCGCCGTCGGCGACTGCCGCGGC
ATCCCGTTCGACCCTTCCTTTCTCCCGCGCCTCCTCCTCTCCGCCACCTCTTGCACACCC
TCCTCCCTCGCCGCGCGCGCAGTCTCCGCTCTCCACGCGGCGGGCCTCAAGCTCGGCGCG
CTCCCAGCCTCCCTCCCGGCCTCGAACGCCCTCATCTCCGCCTACTCCCACGCCGACCTC
CTCCCCTCCGCGCTCCGCGCCTTCTCCGTCCTCAGCCACCCTTCCACCGCCTCCTACACC
ACCGTCCTCTCCGCGCTCTCCCGCCACGGCCGTCCCAACGAGGCGCTCTCCCTCTTCGCC
GCCGCCACCGCGTCCGCGGTCGCGCCCGACGCCGAGCTCCTGTCCTGCCTCGTCTCGTGC
TGCCGCCGCACGTCCGCCTTACTGCCCGCGCGCGCGGCGCACGCCTATGGGGTCAAGAAC
GTGGCGGCGCTGGCGTTCTACGCCTCGGCAGGTCCGGCGCTGGTCGCGCTCTATGCGAGC
CACGGGAAGGTCGGTGCGGCCAGGAGGGTGTTTGGCTACATGAACGGCGACGACGTGGTG
TCCTGGAACGCCATGATCGGCGGGTTCGCCAGTGCCGGGATGGGTGGTGAGGCGTGGGTC
TGCTTCCGGGAGATGCGCTCGAGAGATGTTCGAGGGAATGCCCGCACGGCTGTGGTGGTG
CTGGGGTCATGTGACATGGAGTCCGGCAGGCAGGTTCATGGGACTATAGTGACTAGTCAT
GGTGGTTCTTCAAAAGCCATTTTGTGGAACGCGTTGATGAGCATGTATTCACGTGTCGGC
TGTGTCACCGATGCGGAGAGGGTGTTCCTGGAGATTGTAAGGAAGGATGTCGTGTCATGG
AACGTGATGATAGGAGCGTTTGCGAAAAACGGATATGGAGAAAGGGCCCTTGAGCTTGTG
GACACGATGTTGCAGTGTGGTATGAAGCCAGATTCCGTGACATTCACAGCCATTCTCATG
GCATGCTGCCATTGTGGCTTGGTTGATGAAGGGCTTGAACTATTCCAGCGCTTTGTGTCA
GTTGTTGGTCTCGTCCCAACTATGGAGCAGTGCGCCTGCATTGTGGATTTGCTTGCACGT
GCTGGGAGGTTCGTGGAGGCCTTGGAATTTGTCGGTCAGATGTCAATGAGACCAAATGCA
GTTGTGTGGGGTGCTTTGCTGTCTGCAAGCAGGATGCATCACAACGTGGAATTTGCAAGG
ATTGCATTCGAGCAGCTGGTTCAGGTGGAGCCTGAGAATGCTGGGAATTTTGTGACAATG
TCAAACATATATGCAAAGGCTGGGATGGCAGAAGATGCAAAGAGAGTGAGGATGAAGATT
GATAGTGTAGAGTTAGCAAAACCTTCTGGACAAAGCTGCGTGGAAGTTTTGTAA

Peptide Sequence

PEP ID

OQU93110
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:75114131:75117646:1 gene:SORBI_3001G478900 transcript:OQU93110 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYERHPASPIAPPAVGDCRGIPFDPSFLPRLLLSATSCTPSSLAARAVSALHAAGLKLGA
LPASLPASNALISAYSHADLLPSALRAFSVLSHPSTASYTTVLSALSRHGRPNEALSLFA
AATASAVAPDAELLSCLVSCCRRTSALLPARAAHAYGVKNVAALAFYASAGPALVALYAS
HGKVGAARRVFGYMNGDDVVSWNAMIGGFASAGMGGEAWVCFREMRSRDVRGNARTAVVV
LGSCDMESGRQVHGTIVTSHGGSSKAILWNALMSMYSRVGCVTDAERVFLEIVRKDVVSW
NVMIGAFAKNGYGERALELVDTMLQCGMKPDSVTFTAILMACCHCGLVDEGLELFQRFVS
VVGLVPTMEQCACIVDLLARAGRFVEALEFVGQMSMRPNAVVWGALLSASRMHHNVEFAR
IAFEQLVQVEPENAGNFVTMSNIYAKAGMAEDAKRVRMKIDSVELAKPSGQSCVEVL

Transcript Sequence

Transcript ID

OQU93110
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:75114131:75117646:1 gene:SORBI_3001G478900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCCCGGCGCGCACCCAATGTACGAACGCCACCCCGCGAGCCCGATCGCGCCGCCCGCCG
TCGGCGACTGCCGCGGCATCCCGTTCGACCCTTCCTTTCTCCCGCGCCTCCTCCTCTCCG
CCACCTCTTGCACACCCTCCTCCCTCGCCGCGCGCGCAGTCTCCGCTCTCCACGCGGCGG
GCCTCAAGCTCGGCGCGCTCCCAGCCTCCCTCCCGGCCTCGAACGCCCTCATCTCCGCCT
ACTCCCACGCCGACCTCCTCCCCTCCGCGCTCCGCGCCTTCTCCGTCCTCAGCCACCCTT
CCACCGCCTCCTACACCACCGTCCTCTCCGCGCTCTCCCGCCACGGCCGTCCCAACGAGG
CGCTCTCCCTCTTCGCCGCCGCCACCGCGTCCGCGGTCGCGCCCGACGCCGAGCTCCTGT
CCTGCCTCGTCTCGTGCTGCCGCCGCACGTCCGCCTTACTGCCCGCGCGCGCGGCGCACG
CCTATGGGGTCAAGAACGTGGCGGCGCTGGCGTTCTACGCCTCGGCAGGTCCGGCGCTGG
TCGCGCTCTATGCGAGCCACGGGAAGGTCGGTGCGGCCAGGAGGGTGTTTGGCTACATGA
ACGGCGACGACGTGGTGTCCTGGAACGCCATGATCGGCGGGTTCGCCAGTGCCGGGATGG
GTGGTGAGGCGTGGGTCTGCTTCCGGGAGATGCGCTCGAGAGATGTTCGAGGGAATGCCC
GCACGGCTGTGGTGGTGCTGGGGTCATGTGACATGGAGTCCGGCAGGCAGGTTCATGGGA
CTATAGTGACTAGTCATGGTGGTTCTTCAAAAGCCATTTTGTGGAACGCGTTGATGAGCA
TGTATTCACGTGTCGGCTGTGTCACCGATGCGGAGAGGGTGTTCCTGGAGATTGTAAGGA
AGGATGTCGTGTCATGGAACGTGATGATAGGAGCGTTTGCGAAAAACGGATATGGAGAAA
GGGCCCTTGAGCTTGTGGACACGATGTTGCAGTGTGGTATGAAGCCAGATTCCGTGACAT
TCACAGCCATTCTCATGGCATGCTGCCATTGTGGCTTGGTTGATGAAGGGCTTGAACTAT
TCCAGCGCTTTGTGTCAGTTGTTGGTCTCGTCCCAACTATGGAGCAGTGCGCCTGCATTG
TGGATTTGCTTGCACGTGCTGGGAGGTTCGTGGAGGCCTTGGAATTTGTCGGTCAGATGT
CAATGAGACCAAATGCAGTTGTGTGGGGTGCTTTGCTGTCTGCAAGCAGGATGCATCACA
ACGTGGAATTTGCAAGGATTGCATTCGAGCAGCTGGTTCAGGTGGAGCCTGAGAATGCTG
GGAATTTTGTGACAATGTCAAACATATATGCAAAGGCTGGGATGGCAGAAGATGCAAAGA
GAGTGAGGATGAAGATTGATAGTGTAGAGTTAGCAAAACCTTCTGGACAAAGCTGCGTGG
AAGTTTTGTAATAAAGCATAAGACTCCATGGACTCATCAGAGTTGCCCATATCAAAGAGG
TAGGCTTAGACTACTTTACTACTAAAAAATCTGGTGTCACCCTAATTACCGAACACTAGC
AGAATCTAGTGACCTGAAAGACTACTTTTGATTTATATGGCTGGTTATGAACGTTAGCTT
GTCAGAAAGGATTGCAGCAGGGAAAACCAAATCATGCAATTACTGATCTGAAGTGACTGT
ATGTTTTGATGGTATGGTAATTTTATGTGGCTACATGTTCTGGTATTGTACATCATTGTT
GCAGCAGTTTTTGCTTATTATTCCTCACCCTATGTTGCCCAGCAACCAGGAAATTGATTG
AAGATGAATATCAGCACATGGTACCACAACAGATATAATACGGATCTCCCGATTACTTTA
CAGGAAATGATGGCAAAATAAACCTTATGTCCTTATCCATGATGCAGTCAATTCAAAACT
GCGGACCCTTCCCTGCATGCATAACTCATCTCCCGGCACGCATCAATATCGGCAGAAGTA
TTGGCAGTGGAAAAACATCATGATAAAGCTTCCACGAGAAGATCTTTCACTTTCCAAGTA
ACTTGATCCACTTGTATCTGCTCAATTTGGATAGTTCTACTTGCAGACAAAAGAATTGAT
ATGAGAAAGAGCCTTTGAGCTTGTGGACATGATATTGCACTGTGTTATGAAGCCAGACTC
TGATACTCACGGCTATTCTCATGGCATGTTTTTATTGTGGCTTGGTTGACGAAGGGTCAA
TTATTGCAGCGGTTTGTATCAGATGTTGGTCTTGTCACAACTAAGTAGGATGCATCGCAA
TGCGTAATCTGGAAGGATTGCATTAGAGCATCTGGCGCACGTGGAGCCACAGAATGCTGG
AAATTCTTGGACGATATCAAACATTTATACAAAGGCTGGGATGGTAGAGGATGCAAGTGA
GGATGATGATTGACAGAGTATAGGGAAACCTTCTGGATGGAGACTCCATGTATTCTTGAG
AGTTCCACATATTTCGGAGTAGGTTTCAACTACTTTACCACTCACAAATCCTGTGTCACC
ATATTGTGGAGCACTAAAAGAATTCAGTGACCTGGAAGAAGCACCTTTGATTTCTTATGA
TTGAATGGTCGATGGTTAACACTGGCTGATGAGTTTGGACTGCAGCAAGATAAACCAAAT
TCTGCACTTAGTGATCTGAAGTTACTCGAAGCCATGTTTTGATGGTAATTTTGCATGCCT
ATATGTGCTGCTATTGTACAGCATAGGTGCAGCAGCAACCAGGAGGCTGATTGAAGATGA
ATATCAGCATATGTACCACAACCACCAGTACAGTTCTGATCTCCTGAATCCTGATTACTT
CACGAGAAGTGAAGGCAAAATAAAGTTTCTCAAGATGAAGTCCATTAACTGTACATGGAA
AAGCTTTCGCAAAATATTTGTGGTACTGGTACGTAACTCATCTCCCTGGCGTCCAGCATT
ATTGGCAGAAGTATTGGCGATAGAAAAGCTTCTGCGGGAAGATGTTTATTGAATCTGTTC
ATATCAAAGGCGGTTCATTTTACAGGGAAAGATGGAGTTTCGTTCCTCTGTAGATTGTAT
CTGATTCTTCAACGTATGCAGTGGTAAATGAAGTAATGGTAGTTTGGTCCAACATTCCTC
CTTGGCTACTCGCCCTTGTCCCTTTACGTGAAAGTTTTTTTTTCTTTTAGCGTGGGAGCC
AATTTATTTCATCATCACCAATTCACTAGCATGATGCAAGGCTTTTTGAATGAAAAGCAT
TCTTCATGAAAGTTGGGCTACTGCATTTGAAGTGATGCTGTACATTGTTTGGTTAAACAT
GGGTCGGAGGAGTACGATGTGATGCTGTCCTGGATATGCACCTGCTCACATCCATATGGT
ACAGAGATGGATGGGGCTATCAGATGGAGCATATCTGCATATGGAGATATATATGTTAGG
AATAATATAGCAGCAATGCTTTGCTTTGTAGAGGAACCGAATGATGGAGGGCTGTTCTTT
CCTGAGAGAGAGAGAAAAAAACAATATGTCAGTCTA