Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93062
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:74195669:74200679:-1 gene:SORBI_3001G469100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGTGGAGACGACGCCCACGACGGCCGTGTCGTCTTCCGGCGGGGCCGCGCAGCTG
CCGCCGCCCGGCCCGCCCGCCAAGAAGAAGCGTGCCCTCCCCGGCATGCCAGATCCTGAC
GCGGAGGTGATCGCGCTGTCGCCCAAGACGCTGCTGGCGACGAACCGGTTCGTGTGCGAG
ATCTGCAACAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTTCACCGGCGGGGCCACAAC
CTCCCCTGGAAGCTGCGGCAGCGGAGCGGCAAGGAGGCCCGGAAGCGGGTGTACGTGTGC
CCGGAGCCCAGCTGCGTGCACCACGACCCGTCGCGCGCGCTCGGCGACCTCACCGGCATC
AAGAAGCACTTCTGTCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAG
AAGTACGCCGTGCAGTCGGACTGGAAGGCGCACGTCAAGACCTGCGGCTCCCGCGAGTAC
CGCTGCGATTGCGGCACCCTCTTCTCCCGGAGGGACAGCTTCATCACCCACCGTGCCTTC
TGCGACGCGCTCGCCGAGGAGAGCGCCAAGGCGCGGGTGGAGGCGCCTCCCGCGGAGGAC
GGGAGCTCGGCAGCCGCCGTAGTTCCGCCACCGGTGCCCCCGCCTCCGCCTGCGCCGGCG
CCACTGAGGCAGCAACCGCCCCCGCCTGCGCCGCATCATGCGGAGCAACGCAATGAACCG
GAGGCCAATGCGACCGAGCCCGTCCAGTTCGCGCCGCCGCCGCCACAGGTGCCGGTGCCG
GTGCTTTCGCAAACTACGGTGAGCGCTGCCAATGTTAGCGCCAGCAGCAGCAGCACCGTC
GCGGGGACATCGCAGAGCCTTCTCGGCGGCATGTTCGCACCGTCGTCGATGGCCTCAGCG
CCGCAGTTCCCGGAGCGCGCCCTGCCCGTCAAGCCGCCGTCGCTGTGCCTCGCCACGGAC
GCGTCGTCGTCAATCTTCTCGGCACCCGTATCCACCGAGCGCCAGCAGTTCGCGCCGCCG
CCGCCTCCGTCCCCGTCCCCGTCACCGCACATGTCCGCCACCACGCTGCTCCAGAAGGCC
GCGCAGATGGGCGCCACCTCGTCAAGCTCGTCGTTCCTCCGCGGGCTAGGCCTGGACGTC
TCCTCTTCATCGCCGGGGGCGTCGTCGTCAGGCCAGCCGCAGCACCACCATGAAGGCGCC
ATGCAAGTGTCACTCCCGGACGCTTCGCTGCCGCAATGGCCGCCGCGGCTAGAGCATGAG
CCGTCGCCAATGCTGTCGGCCGGGCTCGGGCTCGGGCTGCCATACGACTCCACAGGGGCT
CAGGTGTGCTTGCCGGAGCTCATGATGGGTCAGTCGTCTCTGTTCAGCGGGAAGCCGGCT
ACACTGGACTTCCTGGGGCTCGGAATGAGCCCGACGGGCGCGCCAGCAAGCAGAGGTATC
CCCGCGTTCATCCAGCCCATCGGCGGCGCTGTCGGCATGGCCGGGACCGGAGCTGGCGCC
GCCGAGACGTTTGGCGCCGGACGTGGCCCGCAGGCGACGCCATGGGAGAGGAATCCGAGT
AGCTCGCCAATCCTGTAA

Peptide Sequence

PEP ID

OQU93062
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:74195669:74200679:-1 gene:SORBI_3001G469100 transcript:OQU93062 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEVETTPTTAVSSSGGAAQLPPPGPPAKKKRALPGMPDPDAEVIALSPKTLLATNRFVCE
ICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEARKRVYVCPEPSCVHHDPSRALGDLTGI
KKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHVKTCGSREYRCDCGTLFSRRDSFITHRAF
CDALAEESAKARVEAPPAEDGSSAAAVVPPPVPPPPPAPAPLRQQPPPPAPHHAEQRNEP
EANATEPVQFAPPPPQVPVPVLSQTTVSAANVSASSSSTVAGTSQSLLGGMFAPSSMASA
PQFPERALPVKPPSLCLATDASSSIFSAPVSTERQQFAPPPPPSPSPSPHMSATTLLQKA
AQMGATSSSSSFLRGLGLDVSSSSPGASSSGQPQHHHEGAMQVSLPDASLPQWPPRLEHE
PSPMLSAGLGLGLPYDSTGAQVCLPELMMGQSSLFSGKPATLDFLGLGMSPTGAPASRGI
PAFIQPIGGAVGMAGTGAGAAETFGAGRGPQATPWERNPSSSPIL

Transcript Sequence

Transcript ID

OQU93062
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:74195669:74200679:-1 gene:SORBI_3001G469100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCTCCCCCTAGTTAATGCACCGCTCTTGCGAGCCATGGCCTCCCCCCGTCCGTCCTTTT
TAGCGGCTTCTGCGACTGCTCCCACACCCCCTTCCTCTTGCCTCGTCAGTCGCCTAGCTA
GCCTCCCTCACAACAGCAAGCCGGCGACCGGTAGCTCGGACCTCGGCGGCGTCGCTCCCC
CTCTTCCAAAGGCGCGCGTGCTTTTATGCTCGCGGCAGCTCGGTTCGTGGACTTCCCTCT
AGTAGCGCTCTCCGCCTCTCGCCCTCGGACGACCTTTCTGCGAAAGCGAAGATTCCGGTA
TGGAGGTGGAGACGACGCCCACGACGGCCGTGTCGTCTTCCGGCGGGGCCGCGCAGCTGC
CGCCGCCCGGCCCGCCCGCCAAGAAGAAGCGTGCCCTCCCCGGCATGCCAGATCCTGACG
CGGAGGTGATCGCGCTGTCGCCCAAGACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGA
TCTGCAACAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTTCACCGGCGGGGCCACAACC
TCCCCTGGAAGCTGCGGCAGCGGAGCGGCAAGGAGGCCCGGAAGCGGGTGTACGTGTGCC
CGGAGCCCAGCTGCGTGCACCACGACCCGTCGCGCGCGCTCGGCGACCTCACCGGCATCA
AGAAGCACTTCTGTCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGA
AGTACGCCGTGCAGTCGGACTGGAAGGCGCACGTCAAGACCTGCGGCTCCCGCGAGTACC
GCTGCGATTGCGGCACCCTCTTCTCCCGGAGGGACAGCTTCATCACCCACCGTGCCTTCT
GCGACGCGCTCGCCGAGGAGAGCGCCAAGGCGCGGGTGGAGGCGCCTCCCGCGGAGGACG
GGAGCTCGGCAGCCGCCGTAGTTCCGCCACCGGTGCCCCCGCCTCCGCCTGCGCCGGCGC
CACTGAGGCAGCAACCGCCCCCGCCTGCGCCGCATCATGCGGAGCAACGCAATGAACCGG
AGGCCAATGCGACCGAGCCCGTCCAGTTCGCGCCGCCGCCGCCACAGGTGCCGGTGCCGG
TGCTTTCGCAAACTACGGTGAGCGCTGCCAATGTTAGCGCCAGCAGCAGCAGCACCGTCG
CGGGGACATCGCAGAGCCTTCTCGGCGGCATGTTCGCACCGTCGTCGATGGCCTCAGCGC
CGCAGTTCCCGGAGCGCGCCCTGCCCGTCAAGCCGCCGTCGCTGTGCCTCGCCACGGACG
CGTCGTCGTCAATCTTCTCGGCACCCGTATCCACCGAGCGCCAGCAGTTCGCGCCGCCGC
CGCCTCCGTCCCCGTCCCCGTCACCGCACATGTCCGCCACCACGCTGCTCCAGAAGGCCG
CGCAGATGGGCGCCACCTCGTCAAGCTCGTCGTTCCTCCGCGGGCTAGGCCTGGACGTCT
CCTCTTCATCGCCGGGGGCGTCGTCGTCAGGCCAGCCGCAGCACCACCATGAAGGCGCCA
TGCAAGTGTCACTCCCGGACGCTTCGCTGCCGCAATGGCCGCCGCGGCTAGAGCATGAGC
CGTCGCCAATGCTGTCGGCCGGGCTCGGGCTCGGGCTGCCATACGACTCCACAGGGGCTC
AGGTGTGCTTGCCGGAGCTCATGATGGGTCAGTCGTCTCTGTTCAGCGGGAAGCCGGCTA
CACTGGACTTCCTGGGGCTCGGAATGAGCCCGACGGGCGCGCCAGCAAGCAGAGGTATCC
CCGCGTTCATCCAGCCCATCGGCGGCGCTGTCGGCATGGCCGGGACCGGAGCTGGCGCCG
CCGAGACGTTTGGCGCCGGACGTGGCCCGCAGGCGACGCCATGGGAGAGGAATCCGAGTA
GCTCGCCAATCCTGTAACACACATGGATGGATAGCAAGTAGTTGTTGAACCCCAAGCGCT
GTGATTTTGGGCAAAGGAGGGATCGGGAGAGGAAACAATAGACGCCAGGTTGGATTAGCA
GCTAGTAGTCTCTTCCACTGTCAGTTCTTGCTGTTCTTTTGTTTCTTTTAGCTCGGTACG
AAGTTACGAGTACTCCTAGAACAAGTGAGTTCTTTCTGGTCTCTTTCCCTCCCGTCGCTT
GCCGTTGTCTCTTCCCGATTGCTTCCTTGCGCTTGTCATCTTGCTGCAACTGCCGCGGCA
TTAAGCGCGCGGCACAGTGGCAACGCGAAAGTGGATGGCGAAATTTAATGGGATTGGTGT
TGCAGCCTGGGTCCTGGGACGATCAGCAGGTGATGATGAACATTCAAGCTCGCCCTGGAA
TTGTGTTCAAGTGTCCGTGTCATCAGCCTGGTACTACCAGCGTTTCTCTCGCCACTATTC
CTTCCTATCAATGCCCGGCTCTGTGGCGGCCCAGGTACATGCATGTGTGACTTGACTGTG
TGCGGGTAGCTACTTTTAATAGGTTATCTCCTGTTGTGTTCTTTCGCGGTGGTTGGCTCC
ATGACTCCATCGACCGCTGACTAAGGCCCTGTTTAGTTTTCCACCCAAAAATTTTTCATC
CATCCCATCGAATCTTTAGACACATGCATGGAACATTAAATATAGATAAAAAAATAAACT
AATTACACAGTTTAGTTGAGAATCACGAGACGAATCTTTTAACCCTAGTTACTCTATGAT
TAGCCTTAAGTGCTACAGTAACCCACATATGCTAATGACAGGTTAATTATGCTTAATAAA
TTTGTCTTGCAGTTTCCTCACGAGCTATGTAATTTGTTTTTTTATTAGTTTCTAAAAAAC
TCTCCCGACATCCTTCCGACACATTCGATGTGACACACAAAAATTTTTCATCCCCAATCT
AAACAGGCCCTAATTTCTTGTTTAGGCCTACAGATTCTGATGATTGCAGTTGCAGCATCC
TACTCCTACATTGCTTTAGTTGGATAATCCAACGGCGGTTAACTTCATTTCGTACTCCTT
ATTGAAAAAGAAAACCTTAATTTCGTACTCGTAAACATCTGACAGGCATACGACAGACGT
ATGAACTTGTGATACGGTAGCTTGGCATGTCTTTGTCCGATAATACAACTCTACAGACAG
AGGCAGGTCGAACTCACATCACATGGAACAATTGGTGGCTGAAACTTGAAACAGCGAAAA
TATACGAAAGGCAGCACAGCGCGTGTCATTCTTGTCATGGACTGTGCAAGTATATACACG
TCGCTATCTACGGTGAGCCAGCAGCGGAGGGCAACGACCGAGTGCGATTGCTCATGGACT
TTTCGCTCTCGCCCGTTTGGAATCATGGAGATTGGCGACCAGGCAGTTGGATTGGATGGA
TGCCTTTCGAACATGTGCCGCAGGCCACAGACCACGGTTCTTTCGAGTTTCGACGACCGC
CATACTACGTGTTGGATTGCTGCTTTCAACCTGTGTGTGCGGATGACGCGGACTTTTCGT
CTGTGATCGAGTGCACCGCATGTGCGTGGCAGATCGCTTTTTTGTGTGTACCCGACCTCT
GACGAGTGACGGCCTACTACTTTGAATCCCTGCGTCGACGCAGACTGGGCTGCGGCGTTG
GCCGAGGGATGCGCGAAAGTCGCGCAAGGACTCTCGCTGTACACGAGCGGTGAGTGGCGC
CGACTCTGATCGGTTGCATTCATGTCCGTTTGCAATCTGACCCGTGGTTATCCAGGCCTT
GTTTAGTTCCAAAATATTTTACAAAATTGACACTGTAGCTTTTTCGTTTGTATTTAATAA
ATATTGTCCAATTATGGATTAACTAGGCTCAAAAGATTTGTCTCGTCAATTCCGACTAAA
CTGTGCAATTAGTTTTTATTTTTGTCTATATTTAGTACTTTATGCATGTGTCTAAAGATT
CGATATGACAGAGAATCTGAAAAATTTTGCAAAATTTTTTTAGGAACTATACAAGGCCCC
AGTTGCGGAAGCATTTGCCCCGATGGAGCTCACATCAGGCATTTGCGGCATTTCCGTCGA
GCACAAGCAGCCGCGTTTGCAGAGCAACAATAATTTGTTGTCATCTCGACAGGCAGGAAC
AGCATCAGAGTCCAAGGTAACTCCTCCCAGAAACGCTCCGCTGAGAGGCGATGATCGTCG
CTGTTGTCTGTAAGCGCACGCGGGGCAGCAAAGGTGTACTGCGTCCTCCGATCGGCGTGG
CGTGCGGTCACCG