Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93053
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:74033170:74037753:1 gene:SORBI_3001G467200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCGCGATCATGCTATGTACCTGCAGCCGGGACCAGTCCAAGTTTGAAGATCTTCCT
CGATCACCAGAATCTCTTGCAACACGTGACTTTTCAGCGAATTGTTCTTCTTCAAAGATG
GCAAGTCGAGAAACAACTCCTGATGATAGCCAAGTAAATGAAGTAGAATCAGACCTAAAA
GAAACCCTTTCACTAAATTATGAGGAGGCCCGAGCATTGCTAGGTAGACTGGAACATCAG
AGAGGGAACTTTGATGCAGCATTGCAAGTTCTTCAGGGGATTGATATAAGAAGCCTGAGA
CCGCGAATGACCAGTGCTATTGCTGAAAGTATCAAGCCTAGAACGCCCCCACGCTCTTCA
AGAAGGAAATCTTCACAAGTGAATGGAATGCTCATGCATATGTCAATGCATTCTGTAAGC
TTGCTTCTAGAGGCCATACTGCTTAAAGCAAAATCTCTGGACACCCTTGGTAGAGTAGCA
GATGCTGCAGAAGAATGCAGAACCATCATAGACATTATCGAGTCTGCATGGCCATACGGT
GTTCCGGATGGTACTGCTGAAGAGTCCATCATCGCATATCGCAGAGCTCTTGCAAAGCCG
TGGAATCTAGATTCTCAAAGGTCCGCCAAAATGCAAAAAGATTTGGCAGTGACTCTGCTG
TATTGTGGCGTTGAAGTGAAGTTCCCTCAAGAATTTGCTCAGGAAAGGAATCTGGTAACC
CCTGGGAACAACTTAGAGGAAGCAATTTTGTTGTTACTCATGCTAACAAGAAAGCTATCT
CTCCGAGAAATACAATGGGATCCTGACCTTGTGAATCATTTGATGTATGCACTCTCATTA
TCTGGGCACTATGAAGTTTTGGCCAGCCATCTTGAAATGCTGTTGCCTGGAACCTATACC
AGATCAGAGAGGTGGTATATCCTTGCACTTTGCTACGGTGCAGCTGGCATGGATGATAGT
GCGTTAAACATCATAAGGAATGGTTTTTCTGTGCTGGAGAGAAAGGGAAAGCCTCATGTT
CCATCTCTTCTTTTAGGAGCAAAACTATGTTGTAAGAACCCAAAGCATGCTTCTGAAGGG
ATAAAGTTTGCAAATAAAGCTATGAAGTCTTTCGGAAGACGTGATCTGCATTTCATCAGC
ACTGCAAAACACTTTCTCGGTGTTTGTTATGGACCTTTTTCTAGGTCCTCCGCCTCACAC
TTGGAGAAATCGAGATTGGAAGATAATGCACTGAGGCTGCTGCAGGATGCTGCTACAACA
GCAAAGTATAATCCTGAAATAATGTATAGCCTTGCTTGGGAAAATGCAATGCAGCGCAAA
CTCAATGCAGCTGTTGAAAGTGCAACAGAATGTCTTGAGATGGTGATGGGAGGTTCTGTT
AGTGCCTGGAAGTTACTAATTCTTGTACTATCTGCACAACAGAATTTGCAAGAAGCTGAA
GCAGTAGCAGATTTTGCAATGGATGAAGCTGAGAAAAATGATCAGTTGGATATTTTGAGG
CTGAAAGCACAAATTCAGGCTTCCCGTGGACAGTTCAAGTCTGCAGTGGAATCTTTTCGG
GTTTTGCTTGCCAGTATCCAAGTAAAGAAGGACATCTGGAAATCGACCACTTGTAATGAG
GTTAAATGCCTACAGAAGTTGGAGATGGACTCATGGTTAGATTTGGCATCAATCTACTCA
AAGCTTGAGGCATGGCATGACTCAAACATCTGCCTTGACAAAGCTATATCCATTAATTTC
TTTTATCCCAAGTGTTGGCATGTCAGAGGTCTTCTGTTGGAGGCTCAATTCTTGCACAAG
GAAGCCCTGATGGCGTTCTCTTTCGCCCTCTCAATTGACCCAGATTACGTCCCCAGCATG
GTTTGCATGGCAGGAATTCTCCGAGATATTGGAGGGAATTCGCTATCAATTGCAAGAACT
TACTTGCGCAATGCCCTCCGTTTAGAGCCTACAAACCACCGAGCTTGGTTGAGTCTTGGG
CTTGTCCTGAAAGCTGAAGGATCGCTGCAGGAGGCTGCGGACTGCTTCCAGGCAGCATAT
GAGCTCAGAGAATTGTCACCAATTCAGGACTTCTCTGAGCAACTCCCGATCATGCTGCAT
TAG

Peptide Sequence

PEP ID

OQU93053
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:74033170:74037753:1 gene:SORBI_3001G467200 transcript:OQU93053 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSAIMLCTCSRDQSKFEDLPRSPESLATRDFSANCSSSKMASRETTPDDSQVNEVESDLK
ETLSLNYEEARALLGRLEHQRGNFDAALQVLQGIDIRSLRPRMTSAIAESIKPRTPPRSS
RRKSSQVNGMLMHMSMHSVSLLLEAILLKAKSLDTLGRVADAAEECRTIIDIIESAWPYG
VPDGTAEESIIAYRRALAKPWNLDSQRSAKMQKDLAVTLLYCGVEVKFPQEFAQERNLVT
PGNNLEEAILLLLMLTRKLSLREIQWDPDLVNHLMYALSLSGHYEVLASHLEMLLPGTYT
RSERWYILALCYGAAGMDDSALNIIRNGFSVLERKGKPHVPSLLLGAKLCCKNPKHASEG
IKFANKAMKSFGRRDLHFISTAKHFLGVCYGPFSRSSASHLEKSRLEDNALRLLQDAATT
AKYNPEIMYSLAWENAMQRKLNAAVESATECLEMVMGGSVSAWKLLILVLSAQQNLQEAE
AVADFAMDEAEKNDQLDILRLKAQIQASRGQFKSAVESFRVLLASIQVKKDIWKSTTCNE
VKCLQKLEMDSWLDLASIYSKLEAWHDSNICLDKAISINFFYPKCWHVRGLLLEAQFLHK
EALMAFSFALSIDPDYVPSMVCMAGILRDIGGNSLSIARTYLRNALRLEPTNHRAWLSLG
LVLKAEGSLQEAADCFQAAYELRELSPIQDFSEQLPIMLH

Transcript Sequence

Transcript ID

OQU93053
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:74033170:74037753:1 gene:SORBI_3001G467200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGAGGCACACCGCAGTACCGCACACGCCAGACACGCACGCACACGCCAGGGCGCGGCGCA
ACAAACACTCCTTCCCCTCGTAAGCGTCGTCTCCTATTTGCACTTCGCGGTCTCCTCGGC
TCGCCGCCTCCTCTGCTGGTGTGGGATTCGGCGAGCGCGGGGCGTGGGCGCGTGGACTGG
AGCGCAGCGGGGGGGATCCATGCGTCATTGGGATCGACGACTCCTCTTGGTGAGCAGCCA
ACCCTAGCTTGCCTGGACGGGAACTTCCTACCGCTGTTTTTTCGCGATTCTCCTCCGCGT
GGTTTTTCCCTGTAGATGTTTCGGCTGCATTGAGCAATCGCGCCCGGAGTCTCCTGTATC
TCCGTCGTTCGTTCAGTTCAGGATTTGTTTTCTGTGTCATGGAGGGAGGGAGGATCGACG
TGGTCCTTCCGTTGCTCTGCTTGATGCTTGTTCTGTTCGAGGAGGTTCGTAGCCTTCTTC
GGAATTTTCACGCTGCGTAGGATTTAGGATCCGACTACCCGGAGCTCATGTGGTGGTGTA
GTTTAATTTCTGAAATACGATCGACCTTGCGATTTTAGGGGGGGCAGCGGTCCTACATTT
CTCGGGAGCAGTAACGGGAGATTGTACGGCGCGCCAGAATTCTGCTGCACTGGCTGCTCT
TGTGTTTTATGAGGTGCAAATAGTGTGTGTCTTGTTGCCATGCAATTCATGGGGGTTTAT
CCCATTCTCTTTTTGTCCTTAATGATTTATCCAATTTTTCCTTGTTTGTTTTCGGGGGTT
TGGTTGGTTGAGATATATGGAGGATGGAATTGATGTCTCTACTGTCTGCTGCGTAGTGGG
GCCATTGCTGCTGATGACACTTGACGGTAGCTTTGGGCGTTGCTGTTCTTGGCGTCTTGT
GAGATTGGTGCGTGTTACATCTGAAGGAGGTGATGATGTTTGTAATCTTACATGGAGTTA
GTACTTAGTAGGAGCGCGAGTGCAAATGGTTGTTAGCCTAGTCATCCAGTTCTGCTCTAC
TGTTGTGTGCCAGAAACTCTGAACCTCCCTTGCGATTGGATATTCCTATAAATGGTGCTG
TACTTAAAGAGGAAAAAAAACGAGACGTCACTCTAACTTGAGAAACTAAAACTAGAGAAC
TGCTAAATCTGCCATATCTGACATTTTTTGCTCTCTCTTTATATGGAGCTTTATGTGTTT
TCTCATGATTTTCTTGCTTAGTATCTAATTACTGCACATGCACTGAGACTTCTTATTTGT
CATTGCTAGGTCCTGCAGTCTACCTGATTGAATTGTGTCCTGACAGAAGATCCCTGAGAG
CTAGAGCTGTTTTTTTTCCCTACATTAAGTTAAATTATCTGGCAGCCGAAGATGTCCGCG
ATCATGCTATGTACCTGCAGCCGGGACCAGTCCAAGTTTGAAGATCTTCCTCGATCACCA
GAATCTCTTGCAACACGTGACTTTTCAGCGAATTGTTCTTCTTCAAAGATGGCAAGTCGA
GAAACAACTCCTGATGATAGCCAAGTAAATGAAGTAGAATCAGACCTAAAAGAAACCCTT
TCACTAAATTATGAGGAGGCCCGAGCATTGCTAGGTAGACTGGAACATCAGAGAGGGAAC
TTTGATGCAGCATTGCAAGTTCTTCAGGGGATTGATATAAGAAGCCTGAGACCGCGAATG
ACCAGTGCTATTGCTGAAAGTATCAAGCCTAGAACGCCCCCACGCTCTTCAAGAAGGAAA
TCTTCACAAGTGAATGGAATGCTCATGCATATGTCAATGCATTCTGTAAGCTTGCTTCTA
GAGGCCATACTGCTTAAAGCAAAATCTCTGGACACCCTTGGTAGAGTAGCAGATGCTGCA
GAAGAATGCAGAACCATCATAGACATTATCGAGTCTGCATGGCCATACGGTGTTCCGGAT
GGTACTGCTGAAGAGTCCATCATCGCATATCGCAGAGCTCTTGCAAAGCCGTGGAATCTA
GATTCTCAAAGGTCCGCCAAAATGCAAAAAGATTTGGCAGTGACTCTGCTGTATTGTGGC
GTTGAAGTGAAGTTCCCTCAAGAATTTGCTCAGGAAAGGAATCTGGTAACCCCTGGGAAC
AACTTAGAGGAAGCAATTTTGTTGTTACTCATGCTAACAAGAAAGCTATCTCTCCGAGAA
ATACAATGGGATCCTGACCTTGTGAATCATTTGATGTATGCACTCTCATTATCTGGGCAC
TATGAAGTTTTGGCCAGCCATCTTGAAATGCTGTTGCCTGGAACCTATACCAGATCAGAG
AGGTGGTATATCCTTGCACTTTGCTACGGTGCAGCTGGCATGGATGATAGTGCGTTAAAC
ATCATAAGGAATGGTTTTTCTGTGCTGGAGAGAAAGGGAAAGCCTCATGTTCCATCTCTT
CTTTTAGGAGCAAAACTATGTTGTAAGAACCCAAAGCATGCTTCTGAAGGGATAAAGTTT
GCAAATAAAGCTATGAAGTCTTTCGGAAGACGTGATCTGCATTTCATCAGCACTGCAAAA
CACTTTCTCGGTGTTTGTTATGGACCTTTTTCTAGGTCCTCCGCCTCACACTTGGAGAAA
TCGAGATTGGAAGATAATGCACTGAGGCTGCTGCAGGATGCTGCTACAACAGCAAAGTAT
AATCCTGAAATAATGTATAGCCTTGCTTGGGAAAATGCAATGCAGCGCAAACTCAATGCA
GCTGTTGAAAGTGCAACAGAATGTCTTGAGATGGTGATGGGAGGTTCTGTTAGTGCCTGG
AAGTTACTAATTCTTGTACTATCTGCACAACAGAATTTGCAAGAAGCTGAAGCAGTAGCA
GATTTTGCAATGGATGAAGCTGAGAAAAATGATCAGTTGGATATTTTGAGGCTGAAAGCA
CAAATTCAGGCTTCCCGTGGACAGTTCAAGTCTGCAGTGGAATCTTTTCGGGTTTTGCTT
GCCAGTATCCAAGTAAAGAAGGACATCTGGAAATCGACCACTTGTAATGAGGTTAAATGC
CTACAGAAGTTGGAGATGGACTCATGGTTAGATTTGGCATCAATCTACTCAAAGCTTGAG
GCATGGCATGACTCAAACATCTGCCTTGACAAAGCTATATCCATTAATTTCTTTTATCCC
AAGTGTTGGCATGTCAGAGGTCTTCTGTTGGAGGCTCAATTCTTGCACAAGGAAGCCCTG
ATGGCGTTCTCTTTCGCCCTCTCAATTGACCCAGATTACGTCCCCAGCATGGTTTGCATG
GCAGGAATTCTCCGAGATATTGGAGGGAATTCGCTATCAATTGCAAGAACTTACTTGCGC
AATGCCCTCCGTTTAGAGCCTACAAACCACCGAGCTTGGTTGAGTCTTGGGCTTGTCCTG
AAAGCTGAAGGATCGCTGCAGGAGGCTGCGGACTGCTTCCAGGCAGCATATGAGCTCAGA
GAATTGTCACCAATTCAGGACTTCTCTGAGCAACTCCCGATCATGCTGCATTAGGAACTT
ATAGCAAAGGATGTTCACAGTTTTTTTATGTGGATTTTTTCCCATAGTTATCTCAGTTAT
TTATTTATCGCTTGCAAAGGTAGGAAGCATATATGATTTTGTGAATGTAAATTAATCCAC
TTATGTTGGTGAGCAAATTTTTCCGCTCTTGAAAACCGCAAAGTTATATATGATTCTCCA
GCAGCATAAAGCTGAACTTTCTTGCACA