Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU93032
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:73697287:73701902:1 gene:SORBI_3001G462600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGTTCTTCTTCCTCCTCCTCCACTCCGGTTCTCTTCGATGGCTGCTCCGACATGACA
TGGTCACCTCAAGATGACCCTAAACCTCAAAATCCATATCAGGGGGAATTTCCTGAGACA
ATCGAAGAGTACTTGCATTATGGTACTATGAAATGTATTGCGTTTAACCGCAAAGGAACA
CTTCTTGCTGCTGGATGCTCAAATGGCAGCTGTATTATCTGGGACTTTGAAACAAGGGGT
TTTATAAAAGAATTTCGTGATAAAGATAGCACTGCACCTATAACAAGTGTCTCCTGGTCA
AGGTATGGCCACCGTTTGCTTGCCTCTGCTACTGACAGGTCATTGACACTTTGGGATGTG
TCAACTGGCGAAAAGATTGCCCGCATTACTCTTCAGCAGACTCCATTGCGTGCCAGCCTT
CAACCTGGTTCTCCAACTCCATCTATTTGTTTGGCATGCCCTCTATCTTCTGCACCTCTT
CTTGTTGATTTGAATACTGGAAGTACCACAGTTCTCCCTGTTTCTGTATCTGGGAATGGT
AACCCCCCTGCACCTACCCCCCGTAATAAATTTGCGGATGGTACCCCACCTTTCACGCCA
ACAGCTGCAACGTTTGATAAGCATGGGGACCTGATATATGTGGGCAACTCCAAAGGAGAA
ATTTTAATCATAGATTCAAAAAGCATCCAGGTACATGCAGTAGTTCCCATCCCTGGCGGA
AGTGTTGTTAAGGATATTGTTTTAAGCCGGGATGGTCAATATCTGCTGACAAATTCTAAT
GATCGGGTCATTAGAGTCTTCCGAAACATTCTGCCTGTTAAAGGTTCTGGAGAGGAGATT
AGAAACATAAGCAACAACAGTAATGAATATGGAAGTCACTACGATAAATTAAAAGCAAAT
GGTACAAGCTGTCTTGTTCTTTCCTGTGAACTTTTGGATGCCATCACAAAGATACAGTGG
AAGGCACCTTGTTTCAGTGGTAATGGTGAGTGGATAGTTGGTGCTTCTGCAAACAAAGGA
GAGCACAGGTTGCAGATATGGAACCAAGCAGGGCGCCTTGTAAAGATGCTTGAAGGTCCA
AAAGAAGCTCTTATTGATCTTGCCTGGCATCCTGTTTTGCCGACAATTACTACAGTGTCT
GTAACAGGCTATGTATACATTTGGGCCAAGGAGCATGTAGAGAATTGGAGCGCTTTTGCT
CCTGATTTCGTGGAATTAGAAGAAAATGAAGAGTATGCCGAACGAGAGGATGAGTTTGAC
TTGAATCCACGTGAAGAACAGGCTGAGGAAGTAGCGATAGATGAGGATGCTGATGTTGAT
ATCGAGACATGTGAGAAGAACACAGTGTTCAGTGATGTGGAGGATTCTGTGGATGAGATC
TGCTACTTGCCAGCAATTCCTTTCCCAGATTCTCCCGATGAGCAGCCAGAGAAATGCCTT
GGAAGTTCAAAGTTGGAGGATAGCAACCATTCTGGTTCCCCATCCTCAATGGATGCTGTA
CAGAATGGACAAGCCATTCCTCCAGCATCAAGCCCAATGGAAGTTGACAACTCTACTGCT
GAAGACCCAGAAGAAGGGCCAAACTCAAAGCGGAAGCGGCGGCTGTCAGTGAAGGGGCTT
GAGTTGCAGCAGTCTGAGAAAGGCAAAAAGGGATCAACAAAGAACAAGTCCATCGGAAAG
TCCACAAAATCCAGTGCCAAGAAGATGGAATCTGCTAATGGAAACAGCTCTGCCTTTGAT
GATGAAGCAACTGAGGATGATGAGATGAACATCGATATCTAG

Peptide Sequence

PEP ID

OQU93032
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:73697287:73701902:1 gene:SORBI_3001G462600 transcript:OQU93032 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSSSSSSTPVLFDGCSDMTWSPQDDPKPQNPYQGEFPETIEEYLHYGTMKCIAFNRKGT
LLAAGCSNGSCIIWDFETRGFIKEFRDKDSTAPITSVSWSRYGHRLLASATDRSLTLWDV
STGEKIARITLQQTPLRASLQPGSPTPSICLACPLSSAPLLVDLNTGSTTVLPVSVSGNG
NPPAPTPRNKFADGTPPFTPTAATFDKHGDLIYVGNSKGEILIIDSKSIQVHAVVPIPGG
SVVKDIVLSRDGQYLLTNSNDRVIRVFRNILPVKGSGEEIRNISNNSNEYGSHYDKLKAN
GTSCLVLSCELLDAITKIQWKAPCFSGNGEWIVGASANKGEHRLQIWNQAGRLVKMLEGP
KEALIDLAWHPVLPTITTVSVTGYVYIWAKEHVENWSAFAPDFVELEENEEYAEREDEFD
LNPREEQAEEVAIDEDADVDIETCEKNTVFSDVEDSVDEICYLPAIPFPDSPDEQPEKCL
GSSKLEDSNHSGSPSSMDAVQNGQAIPPASSPMEVDNSTAEDPEEGPNSKRKRRLSVKGL
ELQQSEKGKKGSTKNKSIGKSTKSSAKKMESANGNSSAFDDEATEDDEMNIDI

Transcript Sequence

Transcript ID

OQU93032
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:73697287:73701902:1 gene:SORBI_3001G462600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGGAATGAGTTCTTCTTCCTCCTCCTCCACTCCGGTTCTCTTCGATGGCTGCTCCGACA
TGACATGGTCACCTCAAGATGACCCTAAACCTCAAAATCCATATCAGGGGGAATTTCCTG
AGACAATCGAAGAGTACTTGCATTATGGTACTATGAAATGTATTGCGTTTAACCGCAAAG
GAACACTTCTTGCTGCTGGATGCTCAAATGGCAGCTGTATTATCTGGGACTTTGAAACAA
GGGGTTTTATAAAAGAATTTCGTGATAAAGATAGCACTGCACCTATAACAAGTGTCTCCT
GGTCAAGGTATGGCCACCGTTTGCTTGCCTCTGCTACTGACAGGTCATTGACACTTTGGG
ATGTGTCAACTGGCGAAAAGATTGCCCGCATTACTCTTCAGCAGACTCCATTGCGTGCCA
GCCTTCAACCTGGTTCTCCAACTCCATCTATTTGTTTGGCATGCCCTCTATCTTCTGCAC
CTCTTCTTGTTGATTTGAATACTGGAAGTACCACAGTTCTCCCTGTTTCTGTATCTGGGA
ATGGTAACCCCCCTGCACCTACCCCCCGTAATAAATTTGCGGATGGTACCCCACCTTTCA
CGCCAACAGCTGCAACGTTTGATAAGCATGGGGACCTGATATATGTGGGCAACTCCAAAG
GAGAAATTTTAATCATAGATTCAAAAAGCATCCAGGTACATGCAGTAGTTCCCATCCCTG
GCGGAAGTGTTGTTAAGGATATTGTTTTAAGCCGGGATGGTCAATATCTGCTGACAAATT
CTAATGATCGGGTCATTAGAGTCTTCCGAAACATTCTGCCTGTTAAAGGTTCTGGAGAGG
AGATTAGAAACATAAGCAACAACAGTAATGAATATGGAAGTCACTACGATAAATTAAAAG
CAAATGGTACAAGCTGTCTTGTTCTTTCCTGTGAACTTTTGGATGCCATCACAAAGATAC
AGTGGAAGGCACCTTGTTTCAGTGGTAATGGTGAGTGGATAGTTGGTGCTTCTGCAAACA
AAGGAGAGCACAGGTTGCAGATATGGAACCAAGCAGGGCGCCTTGTAAAGATGCTTGAAG
GTCCAAAAGAAGCTCTTATTGATCTTGCCTGGCATCCTGTTTTGCCGACAATTACTACAG
TGTCTGTAACAGGCTATGTATACATTTGGGCCAAGGAGCATGTAGAGAATTGGAGCGCTT
TTGCTCCTGATTTCGTGGAATTAGAAGAAAATGAAGAGTATGCCGAACGAGAGGATGAGT
TTGACTTGAATCCACGTGAAGAACAGGCTGAGGAAGTAGCGATAGATGAGGATGCTGATG
TTGATATCGAGACATGTGAGAAGAACACAGTGTTCAGTGATGTGGAGGATTCTGTGGATG
AGATCTGCTACTTGCCAGCAATTCCTTTCCCAGATTCTCCCGATGAGCAGCCAGAGAAAT
GCCTTGGAAGTTCAAAGTTGGAGGATAGCAACCATTCTGGTTCCCCATCCTCAATGGATG
CTGTACAGAATGGACAAGCCATTCCTCCAGCATCAAGCCCAATGGAAGTTGACAACTCTA
CTGCTGAAGACCCAGAAGAAGGGCCAAACTCAAAGCGGAAGCGGCGGCTGTCAGTGAAGG
GGCTTGAGTTGCAGCAGTCTGAGAAAGGCAAAAAGGGATCAACAAAGAACAAGTCCATCG
GAAAGTCCACAAAATCCAGTGCCAAGAAGATGGAATCTGCTAATGGAAACAGCTCTGCCT
TTGATGATGAAGCAACTGAGGATGATGAGATGAACATCGATATCTAGTGTGTTTCTGACT
GAGGGCAATAGGCGTGGGGAATAGAAAAGGTCTTTCCCCCACCACCACCACCACCTAATT
AAAAAGAACTGTCGTATGCTGTGACAATATAAACGCAAGTATCATTGTTGTTGACTGAAA
ATTGGTATATGCTGTTTCTCTTATTTCTTAGCTCTGTTTTGCACCCATGAATATTTGGGA
ATAAAATCTTTTTACTTTC