Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92979
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:72837460:72841598:1 gene:SORBI_3001G451500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAGCCTCACCGATCTCGTTAACCTCGACCTGAGTGATTGCACCGACAAGATCATT
GCCGAGTACATCTGGATTGGAGGATCCGGCATAGACCTCAGGAGCAAAGCAAGGACGGTG
AAAGGCCCCATCACCGATCCGAGCCAGCTGCCAAAATGGAACTACGACGGCTCCAGCACC
GGGCAGGCTCCCGGAGAGGACAGCGAAGTCATCCTCTACCCTCAAGCCATTTTCAAGGAC
CCGTTCAGGAAGGGCGACAACATCCTTGTGATGTGTGACTGCTACACGCCACAAGGCGAG
CCAATCCCTACTAACAAGAGGTACAATGCTGCCAAGGTTTTCAGCCACCCCGACGTTGCA
GCTGAGGTGCCATGGTACGGTATTGAGCAGGAGTACACTCTCCTTCAGAAGGATGTGAAC
TGGCCCCTTGGCTGGCCTGTTGGTGGATACCCTGGTCCCCAGGGACCATACTACTGCGCT
GCCGGTGCCGATAAGGCCTTTGGGCGCGATGTGGTCGACGCCCACTACAAAGCCTGCCTC
TACGCCGGCATCAACATCAGCGGCATCAACGGCGAAGTCATGCCTGGCCAGTGGGAGTTC
CAAGTTGGCCCGTCCGTTGGGATATCTGCCGGTGACGAAATATGGGTTGCCCGCTACATT
CTCGAGAGGATCACTGAGATTGCCGGAATTGTTCTCTCCTTGGACCCGAAGCCAATCCAG
GGTGACTGGAACGGCGCCGGTGCCCACACCAACTACAGCACCAAGTCGATGAGGGAGGCC
GGTGGCTACGAGGTGATCAAGAAGGCGATCGAGAAGCTGGGGAAGAGGCACACGGAGCAC
ATCGCCGCGTACGGCGAGGGCAACGAGCGCCGCCTCACGGGCCGACACGAGACCGCCGAC
ATCAACACCTTCAAATGGGGCGTGGCGAACCGCGGCGCGTCCATCCGCGTGGGCCGCGAC
ACGGAGAGGGAGGGCAAGGGATACTTCGAGGACCGCAGGCCGGCATCCAACATGGACCCC
TACGTCGTCACCGGCATGATCGCCGAGACCACCATCCTGTGGAACGGAAACTGA

Peptide Sequence

PEP ID

OQU92979
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:72837460:72841598:1 gene:SORBI_3001G451500 transcript:OQU92979 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASLTDLVNLDLSDCTDKIIAEYIWIGGSGIDLRSKARTVKGPITDPSQLPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRKGDNILVMCDCYTPQGEPIPTNKRYNAAKVFSHPDVA
AEVPWYGIEQEYTLLQKDVNWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACL
YAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEIAGIVLSLDPKPIQ
GDWNGAGAHTNYSTKSMREAGGYEVIKKAIEKLGKRHTEHIAAYGEGNERRLTGRHETAD
INTFKWGVANRGASIRVGRDTEREGKGYFEDRRPASNMDPYVVTGMIAETTILWNGN

Transcript Sequence

Transcript ID

OQU92979
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:72837460:72841598:1 gene:SORBI_3001G451500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCAGACGAAGCAGGAAGTAAGGCATCCTTCACCATTGGCGTCCATTCAGGTTTAGGATA
AGACGAAAAGTGGCCATACGTGCCTGCTGTTTTAGCTTCTTATATATTCCAGCACAGAAC
AAGTTCTTGGCTGGCTGGCCATTGGCAAACTTCGCCTTGATTTTGTATTCTTTCAGTTGC
AGGAGGACATTCCTTCTGCAAAGACGCTACCCCGTCCACAGGCCACACAGGTAGAGGCAG
GCGCAGCTCTCAATGAGCGAATTCCAAATTTCTGAAAATCACTGAAGCCGTTTCGATCAA
ACTAAATTGTCACGTGGGTCTGGTCAGATGTGCTATTTGTGATCCCTGATAGGAAATAAA
AAACTGAAACTATCTCCCAAGTTGAGACGATGCCTTGCACAACTGCACTGCACAAGACAT
AAATGATGGACACTATCTTCTTAAACTGCCGGTATATATAGATTATATTAAGGGAACTGG
AAAAGAAATCACATTTTATCTCTAAATGAAAATGATACACGCCCTGCCCTGCTTCCGTGT
CCATCTGTCTTCCCCATCGCAGCCAGCTTCGCTGTATAAATAACCCTTGCGCCTCCCGGC
TTCTGACCATCCATTGTGATACTTCAGACAGACACTTCTTCTTGCCTACTAAGCTCTCTT
GTGTTCTTGCCTTCTGCCTGTGCTGTGACTGATGGCCAGCCTCACCGATCTCGTTAACCT
CGACCTGAGTGATTGCACCGACAAGATCATTGCCGAGTACATCTGGATTGGAGGATCCGG
CATAGACCTCAGGAGCAAAGCAAGGACGGTGAAAGGCCCCATCACCGATCCGAGCCAGCT
GCCAAAATGGAACTACGACGGCTCCAGCACCGGGCAGGCTCCCGGAGAGGACAGCGAAGT
CATCCTCTACCCTCAAGCCATTTTCAAGGACCCGTTCAGGAAGGGCGACAACATCCTTGT
GATGTGTGACTGCTACACGCCACAAGGCGAGCCAATCCCTACTAACAAGAGGTACAATGC
TGCCAAGGTTTTCAGCCACCCCGACGTTGCAGCTGAGGTGCCATGGTACGGTATTGAGCA
GGAGTACACTCTCCTTCAGAAGGATGTGAACTGGCCCCTTGGCTGGCCTGTTGGTGGATA
CCCTGGTCCCCAGGGACCATACTACTGCGCTGCCGGTGCCGATAAGGCCTTTGGGCGCGA
TGTGGTCGACGCCCACTACAAAGCCTGCCTCTACGCCGGCATCAACATCAGCGGCATCAA
CGGCGAAGTCATGCCTGGCCAGTGGGAGTTCCAAGTTGGCCCGTCCGTTGGGATATCTGC
CGGTGACGAAATATGGGTTGCCCGCTACATTCTCGAGAGGATCACTGAGATTGCCGGAAT
TGTTCTCTCCTTGGACCCGAAGCCAATCCAGGGTGACTGGAACGGCGCCGGTGCCCACAC
CAACTACAGCACCAAGTCGATGAGGGAGGCCGGTGGCTACGAGGTGATCAAGAAGGCGAT
CGAGAAGCTGGGGAAGAGGCACACGGAGCACATCGCCGCGTACGGCGAGGGCAACGAGCG
CCGCCTCACGGGCCGACACGAGACCGCCGACATCAACACCTTCAAATGGGGCGTGGCGAA
CCGCGGCGCGTCCATCCGCGTGGGCCGCGACACGGAGAGGGAGGGCAAGGGATACTTCGA
GGACCGCAGGCCGGCATCCAACATGGACCCCTACGTCGTCACCGGCATGATCGCCGAGAC
CACCATCCTGTGGAACGGAAACTGATAAAGCCACGGTTGTTCCTCTTCTGCACAACGCTA
CTACGCCTGCAATGCACGCATCCGCTCTGATGTCATGTCAGTTTGGTTTTGCGATTTCGG
TTCCCCGTCGTGGGGTGTCCTAAAATTTTTTACTTCGGTCTCCGGTGTACTGCTTGGAAA
GTCTGAATAATGGCTGCAAATGGATTTTGCTTTCGTCATAGGGGTACCTAGCTACCTTTA
GCTGTTCTTTCCTGTTTATTGGATATGTATAATGTAATGTAATACTATTACTACGTGATT
TTATATGAAAAGAATCATTGTCGTTTTGTTCGCGATCAC