Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92958
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:72284944:72288650:-1 gene:SORBI_3001G446100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTCAGAGTTGAAACAGATGAAGCTGCCATGGCCGTGCCGGAGCCGTCGTCCAGCCTC
GCACTTCGAGTCTTCTACCTGAGGGTGAGCAGGTGCGAGGTCGACGAGTCCATGCTGGGC
ACTCTCACGCTCACCCACACCCCGCTCACTCCTGACACCATCCTGGACTTGAGCGGCGCC
GACCGCCACCCAGGCATCATCAGCAACGGCAACGGCAAGGGCAGCAGCGTATCCTTCTCC
CTCCGCCGAGATCGCGTGGACAAGAGATCGGAGGAAGCCACCTTCGTGTGCACGGCGACC
GTCAGGGTGTCCGGCAGCGTGCGGTTCGAGGTCCAGAGCAAGGACGAGAGGATCCTCGTC
GGGATTCTGGAGGCGTGCGACTGCGACGTGGACGACAGCAAGGGCGCCGGCACCACCAAG
AGCTGGGTGATGAAGTGCCAGGTGCCGACGCAGCGCGGCTCGGGGTTCCTGAGGTGCGGC
TGCGGCGGGGAGAGGGACACGAACACGAAGCCGCCCGTGGTGGAGGTGTACGTCGCGGGC
GTGTTCCGGGACACGCCGGTCGTGTTCACCAAGGCCATGCAGCTGCGGTTCAGGCGGCGG
CGCCAGGTGAAGGCGTTCATGGACCCGATTCCAGAGTGCGGCGAGCAGATGGAGGACATG
AAAGAAACGCCTCCCAACCATCACCCAGAGGAATCGGATTATTACAGGTGCTACAAGCCC
GACCCGGACGAGGACAGCCTCTACACGAGGTCGGACGGGGTTGACGACGGCGAGGAGTAC
AGCGAGCTGTCATGGTTCACCGCCGGCGTGAGGGTCGGCGTCGGCATCAGTCTGGGTATC
TGCCTCGGCGTCGGCGTCGGCGCCGGCCTCCTGGTCCGTTCGTACCAGTCCACCTCCAGG
ACCCTGAAGCGGCGGCTCATCTCAAACCTGCTCTGA

Peptide Sequence

PEP ID

OQU92958
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:72284944:72288650:-1 gene:SORBI_3001G446100 transcript:OQU92958 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFRVETDEAAMAVPEPSSSLALRVFYLRVSRCEVDESMLGTLTLTHTPLTPDTILDLSGA
DRHPGIISNGNGKGSSVSFSLRRDRVDKRSEEATFVCTATVRVSGSVRFEVQSKDERILV
GILEACDCDVDDSKGAGTTKSWVMKCQVPTQRGSGFLRCGCGGERDTNTKPPVVEVYVAG
VFRDTPVVFTKAMQLRFRRRRQVKAFMDPIPECGEQMEDMKETPPNHHPEESDYYRCYKP
DPDEDSLYTRSDGVDDGEEYSELSWFTAGVRVGVGISLGICLGVGVGAGLLVRSYQSTSR
TLKRRLISNLL

Transcript Sequence

Transcript ID

OQU92958
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:72284944:72288650:-1 gene:SORBI_3001G446100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGTGTGCATTGTGTGAGGTGTCAGTTGAGGGATTTACGGGGCCTCACCAGCTCACCTCCA
CCAAAGAAAGATCCCTAGTACTAGTAGTCTATATATATATAGGATATATAGGAGAAATTC
TTTGTCAGGACTGAAGAACTGAACGAGAAGAGGGACCGAAGAGGACACAGGAGAGGGATC
CGCTCAACATTGGAGCTCAATCTGGTAAGCTATTCAAGTATTCATGATTCGTCCCCTCTC
TCTTGTCTCTTGCGTACTTCGCGTTCTCTTATCGTGTTCTTGCCAAATATGAAGGTCTCT
TCCATCATTAGTTGCGGCTACGGTCGCGGTTGTAGTTTAGTCGCGCAATCGAAAATTCGT
TTCTCCTGTAGAAGCTGTTCGTCCATGCAAATATGCGATTGAAATTACAGTCTAAGATTC
TATGATTCTACCAGTTTCTGAATTCTGACCGTAGTCATCAGGATTGGGACATCGATACTA
GAATTGAGGCCTTGAGGGCAAGGCTGAATTCATATTCCTCACCTTTCATGTTCTTGGAGG
GTTGAAGAAGAAAGCTTATTATCAATTCAGATAGCCCAGCTAGAGTTTCATCTATCCTGT
GTGAACTTCATGATACTTCGCATGTGAATTAGCAGATGCTATCTGTTATCCGTTTATGTT
GTAACTGAATTGTTACTGCATGAGATGCGTCAGTAGCTTATACAGTTCTAGCAGCTCTTG
CCTCTTGGCTGATCAGTGATCACTCACTGCCTGTAATATGCCCTGCCAATCTAACCACTC
ACTGTTTTCTTTTTTCTTGTACAGATGTACAGATGGAGTACTCTGTGATGCCCCAATCTC
TGAATGTTCAGAGTTGAAACAGATGAAGCTGCCATGGCCGTGCCGGAGCCGTCGTCCAGC
CTCGCACTTCGAGTCTTCTACCTGAGGGTGAGCAGGTGCGAGGTCGACGAGTCCATGCTG
GGCACTCTCACGCTCACCCACACCCCGCTCACTCCTGACACCATCCTGGACTTGAGCGGC
GCCGACCGCCACCCAGGCATCATCAGCAACGGCAACGGCAAGGGCAGCAGCGTATCCTTC
TCCCTCCGCCGAGATCGCGTGGACAAGAGATCGGAGGAAGCCACCTTCGTGTGCACGGCG
ACCGTCAGGGTGTCCGGCAGCGTGCGGTTCGAGGTCCAGAGCAAGGACGAGAGGATCCTC
GTCGGGATTCTGGAGGCGTGCGACTGCGACGTGGACGACAGCAAGGGCGCCGGCACCACC
AAGAGCTGGGTGATGAAGTGCCAGGTGCCGACGCAGCGCGGCTCGGGGTTCCTGAGGTGC
GGCTGCGGCGGGGAGAGGGACACGAACACGAAGCCGCCCGTGGTGGAGGTGTACGTCGCG
GGCGTGTTCCGGGACACGCCGGTCGTGTTCACCAAGGCCATGCAGCTGCGGTTCAGGCGG
CGGCGCCAGGTGAAGGCGTTCATGGACCCGATTCCAGAGTGCGGCGAGCAGATGGAGGAC
ATGAAAGAAACGCCTCCCAACCATCACCCAGAGGAATCGGATTATTACAGGTGCTACAAG
CCCGACCCGGACGAGGACAGCCTCTACACGAGGTCGGACGGGGTTGACGACGGCGAGGAG
TACAGCGAGCTGTCATGGTTCACCGCCGGCGTGAGGGTCGGCGTCGGCATCAGTCTGGGT
ATCTGCCTCGGCGTCGGCGTCGGCGCCGGCCTCCTGGTCCGTTCGTACCAGTCCACCTCC
AGGACCCTGAAGCGGCGGCTCATCTCAAACCTGCTCTGAAACGACCACATTGTGAGCACT
TATCCGGAGGCTGCAAGACTTCTCCTACTGATGATGATGATGAAAAACACGATAGTATGT
AGATGCTGAAACATTGTGCGGTGTGCCGAATGCACCTAATTTAGTACTCGACTGCTCGTA
GTATTGTACTACCCTTGTGCAGTTGGTATGGTGTATTGTTGGCGGCATGTGTGACAGTGC
CATGGTGATGCTGCCGTGCTGCCTCTTCCGACGACAACGAGGCGGCGCACACTGGCAGCA
AGCGCCTGCGTTTTCAGGAGAATTACATCACGTGTGGCGTGTGTGTTCTGTTCTGACTTC
CGACGGAGCTGCCTTGAGACGTTGGCCTCGGCCAACCGTCGGAGCCCACAAGCAGAGAGG
AATATAGGCTCTTCGTCCCAAAGGTTTAGAAATCATCTAAAAAAAGTAACTTTCTACAAA
ATCATGTGCATGCAAGCATTTGGATCACTGAACTAAAAATTAGTCCGTCGTCACTTGACT
AATCATGGAATTTTAACCATCAATCAGCCTATCAATTAACAGGGGAGTGCTAAGGTCTGC
GAGGCTGTGACGAACTGAAGGAGCGTTGTCCGAGCCGCAGCCACGGACGGAGGTTGAAGA
AGATGCCGATCTCTATTCGTTTTTTTTTTGCAACATCTCTAATTATTTTTTGGTGGCTGC
CTCATTTGTGAACTGTCCATTGTCTAAACTTGGGCCTGGCCGGTTTGCTCTGTTGGGTAC
TGGCCCAAGTCGAGGAAGCGCTAACAGGCCATGCGGCGGCCGACACAGCAGAACAGATTC
CCATTCTGTATCCTGTACTCTCTCTCTCTCTCTCTCTCATTATTTAGTCACTATAATATA
TCTTTTGTCTTTCTAATGCCTTTCCTAATCCTAATTGGCCGGGTTATTCTTTTTACAACC
CCCCCCCAATTACTACCATAGTTATCGGTATTTTTTTTAACCCTACACCAACATCTGGTC
CTTTGTCATTTGAACGACTTAATATATAGTAGTTTTCAAAATTATATGAATATATGTTCC
TTCGTTTTGCACCAGGACAGCCTGAATATTAGGTTTATAAAAAAAATGTACAAATAGTTT
ACATTTGGCATGTGAAACAATAATTTTCATTAACAAATGAAACATCTGGAACAAATAATC
TGTAAGAGCATCTCCAAAAGACTCTTTATATCTTTTCTAATTTTTAGGAATAGAGAATTT
AGTGAAAAAATATCCTCCAACAGCCTTTTTTAATGGAATATCTAAATATACCTCCTCTAT
GCCGGATTTCTCTCCAGCTAAAGATGAAAATAATAACGACTCTCAAGACTTCTTAAGATA
TAGAGAAGTTGTTGAAGTGTACAGAAATATAGAAAACAATTTTTTACTCAATGACTCACC
AAATAATGACCTAAAAATAGATTTTAGGAAAGCTTCTGGAGATGCTCTAATATAATCCTG
GAACAATATAATCATGAATTTAGAACAACTTTTGTTAATGAGTATATCACTTTATTTTTT
TGGACTTTGTACTCAGATCCCTGATTTGATTGGCATTCCTGGGAGCTGAGCACAATAACA
ACTCCAGCGAGACCATCTCCCTGTTCAGCTGCTCTTCTGTTGCGGGTAGCAAACTAGCCA
TCATATATAATAGTAGAAATGGAATGGAGCATCAATCAATCGAATAAAAA