Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92953
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:72213445:72221197:1 gene:SORBI_3001G445500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCGCTCACTCGCCGGCGGTGACCTTGCCGTACCGGAGATGGCGCAGCCGTACATG
AAGAAGGACGACGACGACGAAGACGTCGAGTATTCACCATTCTTTGGGATCGAGAAGGGG
GCTGTTCTGCAGGAGGCACGGGCTTTCCATGATCCACAACTTGATGTGAGACGATGTTCG
CAAGTCATCACCAAGCTATTATATTTACTTAATCAAGGAGAGACATTCACGAAGGTTGAG
GCCACGGAAGTCTTCTTTGCAGTAACAAAGTTATTCCAGTCTAGCGATGCTGGTCTTAGG
AGGCTAGTATATTTAATGATCAAAGAGCTCTCTCCATCGTCAGATGAGGTCATCATAGTC
ACAAGCTCATTGATGAAAGATATGAACAGCAAGACAGATATGTACCGTGCCAATGCTATT
AGAGTTCTTTGTAGAATAATTGATGGTACCCTACTAACTCAAATTGAGAGATATTTGAAG
CAAGCTATTGTTGACAAAAACCCAGTGGTTGCTAGTGCTGCTCTTGTTAGTGGCATCCAC
CTGGCCCAGGCAAACCCAGAAATTGTGAAAAGATGGAGCAACGAAGTCCAGGAAGCTGTT
CAATCAAGAGCTCCACTTGTCCAGTTTCATGGTCTCGCTCTTCTTCACCAGATTAGACAG
AATGATCGTTTGGCTGTTAGCAAGTTAGTTTCTAGTTTGACAAGGGGATCTGTCCGTTCT
CCTCTTGCACAATGTCTTCTTATTCGTTACACAAGCCAGGTTATGCGTGAGTCAAGCATG
AACACTCAAAATGGTGACCGCCCATTTTTTGATTTTCTGGAATCATCCCTCAGACATAAA
GCAGAAATGGTGGTCCTGGAAGCTGCACGGAAAATAACAGAGATGGATGTTACAAGCCGT
GAATTGGCACCAGCGATTACTGTTTTACAGTTATACTTGAATTCATCCAAGCCTGTGCTT
CGATTTGCTGCTGTCCGGACTCTCAATAAGGTTGCTATGACACGCCCTCTGGCGGTGACA
AACTGCAACGTAGACTTGGAGAGTTTGATGTCAGACCAGAACAGGAGTATAGCGACCCTG
GCAATCACTACTCTTCTTAAAACTGGCAATGAATCAAGTGTGGATCGCCTCATTAAACAA
ATTACCAATTTCATGTCTGATATAGCAGATGAATTCAAGATAGTTGTTGTTGAAGCTATA
CGGTCTCTGTGCTTGAAGTTCCCACTAAAATATCGCTCAATGTTGAATTTTTTGAGCAAC
AGCTTGAGGGAAGAAGGGGGCTTTGAGTATAAAAAGGCCATAGTGGATTCAATAGTTGCT
TTGATCAGTGAAATACCAGATGCCAAAGAAATTGGCCTGCTTCATCTCTGTGAATTCATT
GAAGACTGTGAATTCACATATCTTTCTAGTCAGATTTTGCATTTTTTGGGAAATGAAGGG
CCAAGGACATCAGATCCAAGCAGATACATTCGCTACATTTACAACCGCGTGATATTGGAA
AATGCGACTGTTCGTGCTAGTGCTGTCAGCACGTTGGCAAAGTTTGGTGCCCTGGTTGAT
ACGCTCAAGCCTCAGATCTTTGTTCTCTTGCAACGATGCCTGTTTGATACTGAAGATGAG
GTTCGTGATCGTGCTACACTCTATCTCCAAACTCTTAGTGGTGAAGTTGCCATTGGTAAC
GATGAGAAGGATGCGAAGGACTTCCTATTTGGATCCTTTGACGTGCCATTAGCCAACCTG
GAAGCAAGCCTAAGAACTTATGAACCTTCAGAAGAGCCATTTGACATATCTTTGGTGTCG
AGAGAAGTCAGGTCGCTACCACTTAAAGAGAAGGCAGCCCCTGGCAAGAAGCCACCTGCC
GCTGCCGCTGCCCCTGCACCTGTTTCAACCGTTGATGCTTATCAGAAAATGCTTTCATCC
ATTCCTGAGTTCTCTGGGTTTGGAAGACTCTTCAAGTCCTCTGAACCCATGGAGCTGACA
GAGGCAGAAACTGAATATGCTGTTAGTGTGGTTAAGCACATTTATGACGGCTACATTGTA
TTGCAGTACAATTGTACAAACACTATAGAAGAACAACTGCTAGAAGATGTCACTGTTTGC
GTTGATGCCTCTGATGCTGAGGAGTTTTCAGAGATTTGTTCAAAGCCTCTTACAAGCTTG
CCGTATAATTCACCCGGGCAAGTTTTTGTTGCTTTTGAAAAGCCAGAGGGTGTACCTGCT
GTTGGGAAATTTTCAAATTTGTTGAAGTTCACAGTTAAAGAGGTTGACACAACTACAGGG
GAAGCTGATGAGGATGGTGTGGAGGATGAATACCAGTTAGAGGACTTTGAAATTGTTTCA
TCTGATTATATGCTGAGGGTTGCTGTCTCCAACTTTAGGAACGCCTGGGAAAATATGGAC
CCAGAAAGTGAGCGTGTCGATGAGTATGGACTTGGGGTTAGAGAAAGTTTGGCTGAGGCT
GTCAATGCTGTCATTAATATCCTTGGGATGCAGCCGGCACTGAGGTTGTACCAAGAAATG
CAAGATCACACACCTGCCTGCTATCTGGCGTGTTTATTGGCAACGCGAAGGTCCTAG

Peptide Sequence

PEP ID

OQU92953
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:72213445:72221197:1 gene:SORBI_3001G445500 transcript:OQU92953 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPRSLAGGDLAVPEMAQPYMKKDDDDEDVEYSPFFGIEKGAVLQEARAFHDPQLDVRRCS
QVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSSDAGLRRLVYLMIKELSPSSDEVIIV
TSSLMKDMNSKTDMYRANAIRVLCRIIDGTLLTQIERYLKQAIVDKNPVVASAALVSGIH
LAQANPEIVKRWSNEVQEAVQSRAPLVQFHGLALLHQIRQNDRLAVSKLVSSLTRGSVRS
PLAQCLLIRYTSQVMRESSMNTQNGDRPFFDFLESSLRHKAEMVVLEAARKITEMDVTSR
ELAPAITVLQLYLNSSKPVLRFAAVRTLNKVAMTRPLAVTNCNVDLESLMSDQNRSIATL
AITTLLKTGNESSVDRLIKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSMLNFLSN
SLREEGGFEYKKAIVDSIVALISEIPDAKEIGLLHLCEFIEDCEFTYLSSQILHFLGNEG
PRTSDPSRYIRYIYNRVILENATVRASAVSTLAKFGALVDTLKPQIFVLLQRCLFDTEDE
VRDRATLYLQTLSGEVAIGNDEKDAKDFLFGSFDVPLANLEASLRTYEPSEEPFDISLVS
REVRSLPLKEKAAPGKKPPAAAAAPAPVSTVDAYQKMLSSIPEFSGFGRLFKSSEPMELT
EAETEYAVSVVKHIYDGYIVLQYNCTNTIEEQLLEDVTVCVDASDAEEFSEICSKPLTSL
PYNSPGQVFVAFEKPEGVPAVGKFSNLLKFTVKEVDTTTGEADEDGVEDEYQLEDFEIVS
SDYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVNAVINILGMQPALRLYQEM
QDHTPACYLACLLATRRS

Transcript Sequence

Transcript ID

OQU92953
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:72213445:72221197:1 gene:SORBI_3001G445500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGATCGATCGACCCACCACCGCACCGCACCGGCAGCACGCCAGCACGACCACCCTTCAG
CCCCCCCCTGGCGAAACGGTCTCGTCCATCGTCCTTCCCTTCCCGAGCCAAGCACACTGC
ACACCGCCACCCACCAGTAGGCGCCCGGTGTCGCATGCCTCGCTCACTCGCCGGCGGTGA
CCTTGCCGTACCGGAGATGGCGCAGCCGTACATGAAGAAGGACGACGACGACGAAGACGT
CGAGTATTCACCATTCTTTGGGATCGAGAAGGGGGCTGTTCTGCAGGAGGCACGGGCTTT
CCATGATCCACAACTTGATGTGAGACGATGTTCGCAAGTCATCACCAAGCTATTATATTT
ACTTAATCAAGGAGAGACATTCACGAAGGTTGAGGCCACGGAAGTCTTCTTTGCAGTAAC
AAAGTTATTCCAGTCTAGCGATGCTGGTCTTAGGAGGCTAGTATATTTAATGATCAAAGA
GCTCTCTCCATCGTCAGATGAGGTCATCATAGTCACAAGCTCATTGATGAAAGATATGAA
CAGCAAGACAGATATGTACCGTGCCAATGCTATTAGAGTTCTTTGTAGAATAATTGATGG
TACCCTACTAACTCAAATTGAGAGATATTTGAAGCAAGCTATTGTTGACAAAAACCCAGT
GGTTGCTAGTGCTGCTCTTGTTAGTGGCATCCACCTGGCCCAGGCAAACCCAGAAATTGT
GAAAAGATGGAGCAACGAAGTCCAGGAAGCTGTTCAATCAAGAGCTCCACTTGTCCAGTT
TCATGGTCTCGCTCTTCTTCACCAGATTAGACAGAATGATCGTTTGGCTGTTAGCAAGTT
AGTTTCTAGTTTGACAAGGGGATCTGTCCGTTCTCCTCTTGCACAATGTCTTCTTATTCG
TTACACAAGCCAGGTTATGCGTGAGTCAAGCATGAACACTCAAAATGGTGACCGCCCATT
TTTTGATTTTCTGGAATCATCCCTCAGACATAAAGCAGAAATGGTGGTCCTGGAAGCTGC
ACGGAAAATAACAGAGATGGATGTTACAAGCCGTGAATTGGCACCAGCGATTACTGTTTT
ACAGTTATACTTGAATTCATCCAAGCCTGTGCTTCGATTTGCTGCTGTCCGGACTCTCAA
TAAGGTTGCTATGACACGCCCTCTGGCGGTGACAAACTGCAACGTAGACTTGGAGAGTTT
GATGTCAGACCAGAACAGGAGTATAGCGACCCTGGCAATCACTACTCTTCTTAAAACTGG
CAATGAATCAAGTGTGGATCGCCTCATTAAACAAATTACCAATTTCATGTCTGATATAGC
AGATGAATTCAAGATAGTTGTTGTTGAAGCTATACGGTCTCTGTGCTTGAAGTTCCCACT
AAAATATCGCTCAATGTTGAATTTTTTGAGCAACAGCTTGAGGGAAGAAGGGGGCTTTGA
GTATAAAAAGGCCATAGTGGATTCAATAGTTGCTTTGATCAGTGAAATACCAGATGCCAA
AGAAATTGGCCTGCTTCATCTCTGTGAATTCATTGAAGACTGTGAATTCACATATCTTTC
TAGTCAGATTTTGCATTTTTTGGGAAATGAAGGGCCAAGGACATCAGATCCAAGCAGATA
CATTCGCTACATTTACAACCGCGTGATATTGGAAAATGCGACTGTTCGTGCTAGTGCTGT
CAGCACGTTGGCAAAGTTTGGTGCCCTGGTTGATACGCTCAAGCCTCAGATCTTTGTTCT
CTTGCAACGATGCCTGTTTGATACTGAAGATGAGGTTCGTGATCGTGCTACACTCTATCT
CCAAACTCTTAGTGGTGAAGTTGCCATTGGTAACGATGAGAAGGATGCGAAGGACTTCCT
ATTTGGATCCTTTGACGTGCCATTAGCCAACCTGGAAGCAAGCCTAAGAACTTATGAACC
TTCAGAAGAGCCATTTGACATATCTTTGGTGTCGAGAGAAGTCAGGTCGCTACCACTTAA
AGAGAAGGCAGCCCCTGGCAAGAAGCCACCTGCCGCTGCCGCTGCCCCTGCACCTGTTTC
AACCGTTGATGCTTATCAGAAAATGCTTTCATCCATTCCTGAGTTCTCTGGGTTTGGAAG
ACTCTTCAAGTCCTCTGAACCCATGGAGCTGACAGAGGCAGAAACTGAATATGCTGTTAG
TGTGGTTAAGCACATTTATGACGGCTACATTGTATTGCAGTACAATTGTACAAACACTAT
AGAAGAACAACTGCTAGAAGATGTCACTGTTTGCGTTGATGCCTCTGATGCTGAGGAGTT
TTCAGAGATTTGTTCAAAGCCTCTTACAAGCTTGCCGTATAATTCACCCGGGCAAGTTTT
TGTTGCTTTTGAAAAGCCAGAGGGTGTACCTGCTGTTGGGAAATTTTCAAATTTGTTGAA
GTTCACAGTTAAAGAGGTTGACACAACTACAGGGGAAGCTGATGAGGATGGTGTGGAGGA
TGAATACCAGTTAGAGGACTTTGAAATTGTTTCATCTGATTATATGCTGAGGGTTGCTGT
CTCCAACTTTAGGAACGCCTGGGAAAATATGGACCCAGAAAGTGAGCGTGTCGATGAGTA
TGGACTTGGGGTTAGAGAAAGTTTGGCTGAGGCTGTCAATGCTGTCATTAATATCCTTGG
GATGCAGCCGGCACTGAGGTTGTACCAAGAAATGCAAGATCACACACCTGCCTGCTATCT
GGCGTGTTTATTGGCAACGCGAAGGTCCTAGTTAGGTTGTCATTTGGACTGAGTGGGCCC
AACGAAGTGGCAATGAAATTGGCTGTGAGATCAGATGACTCTGAAGTCAGTGATAAGATT
CATGAGATTGTTGCCAGCGGATAAAGCGCAAGACATACAAATCTTCTGCCAAAACAATGT
AGAGCGGGTAGATAGCCTTTATACTAAGATGCTTACAAGGCTTGTTCTTCGTGGATATTC
TCAGATAGCGTATGCTGTAATCTTTTTTTTTTTGGCTGTACAAATAACATCAGATACTAG
TTGATGTTTATTCAATACTGATTTCATGGAATATTCGGAATGGAAATGTACTGTACCCTT
CTGTGGTTCCGCAAAGGTGTGAATGCGGGGCTGAAGACT