Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92942
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:72025023:72029833:1 gene:SORBI_3001G442800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATTTGGATGACATGAAGCAAATATGGACAGAGATTGGGGAGCGTGAACAAGATAAA
GATCGCATGTTCCTTGAACTGGAAACAGAGTGCATGCGTGTATACCGTCGAAAGGTTGAT
AGTGCCAATGCTGAGAGAGCGCAGCTCCGCCAGTCATTGATGGCCAAAGAAGCAGAGCTT
AAAGCTCTAGTTGCTTCTATAGGGGAAAATGGCCCACGATTTACGGTGGATGAAAAGCAC
ACATCGTTGAAAGATCAACTTGCTGCAGTGACACCTCTCTTGGAAGATCTTAGAGCAAAG
AAACAAGACAGAATCAAACAAATCTCAAATGTGCAATCTCAAATCGAGAAGATAAAAGCA
CAAATTTCTGATCACAATTATCAGGACAGTGATGGTTCCGTCAAACAACTTAATGATGAT
CATGACTTGTCAACCAGAAGAATTTCTGATCTTCAAATGCAACTGCGTAATCTACAGAAG
GAGAAGTCTGATCGTCTTCAAAAGGTTTTTATATATGTGGATGAAGTGCACTGCCTATGT
GCAGTGCTTGGGATGGATTTTGCAAAGACTGTAAAAGAGGTTCACCCAAGTTTGCATGGA
GCCAATTCTGAAAATTCAACAAATATTAGTGATAAAACTCTTGAAGGTCTTACTCAGACT
ATCCTGAAGCTCAAAGCAGAAAAGAAGACAAGAGTTTTAAAGTTGCAAGAGACTGTAGAA
AAACTTCACAAGTTATGGAATCTGATGGAGTCAACTGAACAAGAGAGGATACACTTCTCT
GAAGTAGCTGCTGTTCTTGGATCTACTGAGGAAGAAATCAATTCTCCAGGCATTCTGTCA
TTGGAGACAATTCAGGAGACTGAAGAGGAAGTTGAAAGGCTAACTATACAAAAAGCTAGT
AGAATGAAGGAGCTTGTTCTCAAGAAAAGGTTAGAACTAGAAGTCATCTGCAGAAATGCA
CACATGGAGCCTGATATGAGCACAGCACCAGAGAAGATCATTGCGCTGATTGATTCCGGT
TTAGTGGATCCTTGCGAACTCCTTTCCAGCGTTGAAGTACAGATAACAAAAGCAAATGAA
GAGTCCTTAACAAGGAAAGATATCATGGAGAGAGTGGATAAATGGCTATCAGCTTGTGAT
GAAGAGACTTGGCTTGAGGAATATAACCAAGATGATAATAGGTATAGTGCTGGCAGGGGT
GCCCACTTGAATCTCAAGCGTGCAGAAAAGGCAAGAATAACTGTGCAAAAGATTCCAACT
ATGATTGACAACTTGATAGCCAAAACTTTTGCATGGGAGGATGAAAGAAATGTGCCATTT
TTATATGATGGAGTCCGTTTGGTTGCCATTTTGGAAGAGCAAAAACTCAGAAGGGCACAA
AGGGAGGAAGACAGGAGACGCTGCCGGGACCAGAAGAAGCTGCACAGTTTATTGCTTAAG
GAGAAGGAGTTGATTTTCGGGTCCAAACCTAGTCCTAAAAAGACAAGCAGCTTCAATAGG
AGGACAAGCAACCACCATCCAAATGCAAATGGCACTGGATTCATGACTCCGGTTCCACGC
CGAGTTTCAGCTGGCAGTGCCACCCCAGAGCTTCTAACCCCACGCTCATATTCTGGCCGG
TACAACAACTACTTCAAGGAGAACAGGCGTCTGACAACCGCACCGCTAAACTTCTCAGTT
GGTTCCAAGGAGGATAGCATGTCATCCTTCGCATCCATTAGTGGCTCGGAACCTGATTCG
CCATTGTTTTTGCACTAA

Peptide Sequence

PEP ID

OQU92942
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:72025023:72029833:1 gene:SORBI_3001G442800 transcript:OQU92942 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDLDDMKQIWTEIGEREQDKDRMFLELETECMRVYRRKVDSANAERAQLRQSLMAKEAEL
KALVASIGENGPRFTVDEKHTSLKDQLAAVTPLLEDLRAKKQDRIKQISNVQSQIEKIKA
QISDHNYQDSDGSVKQLNDDHDLSTRRISDLQMQLRNLQKEKSDRLQKVFIYVDEVHCLC
AVLGMDFAKTVKEVHPSLHGANSENSTNISDKTLEGLTQTILKLKAEKKTRVLKLQETVE
KLHKLWNLMESTEQERIHFSEVAAVLGSTEEEINSPGILSLETIQETEEEVERLTIQKAS
RMKELVLKKRLELEVICRNAHMEPDMSTAPEKIIALIDSGLVDPCELLSSVEVQITKANE
ESLTRKDIMERVDKWLSACDEETWLEEYNQDDNRYSAGRGAHLNLKRAEKARITVQKIPT
MIDNLIAKTFAWEDERNVPFLYDGVRLVAILEEQKLRRAQREEDRRRCRDQKKLHSLLLK
EKELIFGSKPSPKKTSSFNRRTSNHHPNANGTGFMTPVPRRVSAGSATPELLTPRSYSGR
YNNYFKENRRLTTAPLNFSVGSKEDSMSSFASISGSEPDSPLFLH

Transcript Sequence

Transcript ID

OQU92942
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:72025023:72029833:1 gene:SORBI_3001G442800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAAAGGGGGTTTACTTCTTCCTGCTGATTATAACTGTTCGAAGGACGCATGGATTTGGA
TGACATGAAGCAAATATGGACAGAGATTGGGGAGCGTGAACAAGATAAAGATCGCATGTT
CCTTGAACTGGAAACAGAGTGCATGCGTGTATACCGTCGAAAGGTTGATAGTGCCAATGC
TGAGAGAGCGCAGCTCCGCCAGTCATTGATGGCCAAAGAAGCAGAGCTTAAAGCTCTAGT
TGCTTCTATAGGGGAAAATGGCCCACGATTTACGGTGGATGAAAAGCACACATCGTTGAA
AGATCAACTTGCTGCAGTGACACCTCTCTTGGAAGATCTTAGAGCAAAGAAACAAGACAG
AATCAAACAAATCTCAAATGTGCAATCTCAAATCGAGAAGATAAAAGCACAAATTTCTGA
TCACAATTATCAGGACAGTGATGGTTCCGTCAAACAACTTAATGATGATCATGACTTGTC
AACCAGAAGAATTTCTGATCTTCAAATGCAACTGCGTAATCTACAGAAGGAGAAGTCTGA
TCGTCTTCAAAAGGTTTTTATATATGTGGATGAAGTGCACTGCCTATGTGCAGTGCTTGG
GATGGATTTTGCAAAGACTGTAAAAGAGGTTCACCCAAGTTTGCATGGAGCCAATTCTGA
AAATTCAACAAATATTAGTGATAAAACTCTTGAAGGTCTTACTCAGACTATCCTGAAGCT
CAAAGCAGAAAAGAAGACAAGAGTTTTAAAGTTGCAAGAGACTGTAGAAAAACTTCACAA
GTTATGGAATCTGATGGAGTCAACTGAACAAGAGAGGATACACTTCTCTGAAGTAGCTGC
TGTTCTTGGATCTACTGAGGAAGAAATCAATTCTCCAGGCATTCTGTCATTGGAGACAAT
TCAGGAGACTGAAGAGGAAGTTGAAAGGCTAACTATACAAAAAGCTAGTAGAATGAAGGA
GCTTGTTCTCAAGAAAAGGTTAGAACTAGAAGTCATCTGCAGAAATGCACACATGGAGCC
TGATATGAGCACAGCACCAGAGAAGATCATTGCGCTGATTGATTCCGGTTTAGTGGATCC
TTGCGAACTCCTTTCCAGCGTTGAAGTACAGATAACAAAAGCAAATGAAGAGTCCTTAAC
AAGGAAAGATATCATGGAGAGAGTGGATAAATGGCTATCAGCTTGTGATGAAGAGACTTG
GCTTGAGGAATATAACCAAGATGATAATAGGTATAGTGCTGGCAGGGGTGCCCACTTGAA
TCTCAAGCGTGCAGAAAAGGCAAGAATAACTGTGCAAAAGATTCCAACTATGATTGACAA
CTTGATAGCCAAAACTTTTGCATGGGAGGATGAAAGAAATGTGCCATTTTTATATGATGG
AGTCCGTTTGGTTGCCATTTTGGAAGAGCAAAAACTCAGAAGGGCACAAAGGGAGGAAGA
CAGGAGACGCTGCCGGGACCAGAAGAAGCTGCACAGTTTATTGCTTAAGGAGAAGGAGTT
GATTTTCGGGTCCAAACCTAGTCCTAAAAAGACAAGCAGCTTCAATAGGAGGACAAGCAA
CCACCATCCAAATGCAAATGGCACTGGATTCATGACTCCGGTTCCACGCCGAGTTTCAGC
TGGCAGTGCCACCCCAGAGCTTCTAACCCCACGCTCATATTCTGGCCGGTACAACAACTA
CTTCAAGGAGAACAGGCGTCTGACAACCGCACCGCTAAACTTCTCAGTTGGTTCCAAGGA
GGATAGCATGTCATCCTTCGCATCCATTAGTGGCTCGGAACCTGATTCGCCATTGTTTTT
GCACTAAGTGTGAGATTTCCAGGAGTTTTGTTGCAGTGGTTTCCAAGATCTCACAGAGTT
TGTCACTTGAGGCTCTGCTGATCCTGGTTTTCAACTGTGACTGTTTCAGGTTGGTTAGGG
AGGAGACTTTTGGGTGAGACGGATGGATAGCCTCAAGATTGGACCATTGTGTGGTAGCTG
TTAACATTGCTGATGGGTAACAACAGGTTGTGACAAATTTAGATGAGATTGCTTGTAGAT
ATAATATCTAACATTCATGGTTCTGCTGTACTTCCAAATTTAAGTCGTAAGTTTTGGTTA
GGAAGCATGCAATGCCTAAGTGTGCAATGTATTTGTTTCGTGCTAAGTGTGTATTCTTTC
TTCCTTTCCCCTTTTCGGGGTTCTGTACTATGTTTTGCATGTGAAGAAAGGGTGATTTTT
GTCAAATGATGTAGCAGCTCAGCCCTAAAGGCATACAGCTACAGCATCTTGTCTTGTACT
TGTCGTTTGGATCACAACTGGCGCGTGCTATATG