Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92925
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:71743873:71746249:-1 gene:SORBI_3001G439400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACACCTTCTCATGCTGGGTGAAGCTGGAAGGCGCGTACTCGGCTTTGATCACTGCG
AGGCTGGCGCCGGACAACACCGGCGCGAGGTGCATCGCCACGGTTCTTGCCAGGAGCGAC
TGCTGGGCCTTCGTCAAGGGCGGCTTCGTCCTGGACTGGCCAACGCAGACCTCTGTCATC
TTCTTCCAGAATGCTGACAAGACCCCCATGAAGATCACCGTCGCGAGCGGGTCGCTGCAG
CCGTTCACGACAGACCAGTGGGCGATGCACCAGCAGGATACCATCCGGAAGAGGAGGAAG
CGCGTGGCGACCATCCACGTCGCCGACCCGCAAGGCGCCCGCGTGGTGGGCGCGTCCGTG
TCGGTGCAGCAGACGGCCAAGGATTTCCCGATCGGGTCGGCGATCGCCTCCACCATCCTG
GGGAACCAGGCGTACCAGCAGTGGTTCGTGGACCGCTTCAACGCGGCGGTGTTCGAGGAC
GAGCTCAAGTGGTACTCCACGGAGCCCATGTCGGGTCTGCTCCGCTTCGACGTCCCCGAC
CAGATGCTTGCGTTCGTGCGGTCGCACCGCGTGATGGTGCGGGGCCACAACATCTTCTGG
GAGAACCAGGACGCGACGCCCCGGTGGGTGAAGAACCTGACGGCGGACGACCTCCGGTCC
GCCGTGAACACGCGCATCCAGAGCCTCATGACCCGGTACCGCGGCGAGTTCGCGCACTGG
GACGTCAACAACGAGATGCTGCACTACAACTTCTACGAGCAGCGCCTGGGCCCCAACGCG
TCCATGGACTTCTTCAGCGTGGCGCAGGACGCCGACCCGCTGGCCACGCTCTTCATGAAC
GAGTACAACGTCATCGAGACCTGCGACGACCCCTTCTCCACCGTGGACACGTACGTGGCC
AAGCTCAAGGAGCTCCGGTCCGGCGGCGCCATCCTGGAAGGGATCGGCCTGGAGGGCCAC
TTCTCCAAGCCCAACATCCCGCTGATGCGAGCCATACTGGACAAGCTCGCCACCCTGGGG
CTGCCCATCTGGTTCACCGAGATCGACATCAGCAACAAGTTCGACGCGCAGACGCAGGCA
GCGTACCTGGAGCAGGTGCTGCGGGAGGCCTACTCGCACCCGGCCGTCAGCGGCGTCATG
CTGTGGACGGCGCTGCACCCCAGCGGGTGCTACCAGATGTGCCTCACGGACTGGAACCTC
GCCAACCTGCCCACGGGGGACGTGGTCGACCGCCTGCTGAACGAGTGGCGGACGCTGCAG
GCGGGCGGGCAGACCGACGCGCACGGCGCCTACAGCTTCAGCGGATACCTCGGGGAGTAC
GTCCTCACGGTGAGCTACAACAACAGGACCACGCAGTCCACCTTCTCGCTGTCGCCGGGA
GACGAGACCAGGCACATCAACGTTCAGATGTGA

Peptide Sequence

PEP ID

OQU92925
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:71743873:71746249:-1 gene:SORBI_3001G439400 transcript:OQU92925 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYTFSCWVKLEGAYSALITARLAPDNTGARCIATVLARSDCWAFVKGGFVLDWPTQTSVI
FFQNADKTPMKITVASGSLQPFTTDQWAMHQQDTIRKRRKRVATIHVADPQGARVVGASV
SVQQTAKDFPIGSAIASTILGNQAYQQWFVDRFNAAVFEDELKWYSTEPMSGLLRFDVPD
QMLAFVRSHRVMVRGHNIFWENQDATPRWVKNLTADDLRSAVNTRIQSLMTRYRGEFAHW
DVNNEMLHYNFYEQRLGPNASMDFFSVAQDADPLATLFMNEYNVIETCDDPFSTVDTYVA
KLKELRSGGAILEGIGLEGHFSKPNIPLMRAILDKLATLGLPIWFTEIDISNKFDAQTQA
AYLEQVLREAYSHPAVSGVMLWTALHPSGCYQMCLTDWNLANLPTGDVVDRLLNEWRTLQ
AGGQTDAHGAYSFSGYLGEYVLTVSYNNRTTQSTFSLSPGDETRHINVQM

Transcript Sequence

Transcript ID

OQU92925
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:71743873:71746249:-1 gene:SORBI_3001G439400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTAGTTGTACGCTTATTCGATGCGCTTTTCCTGTGTGTCGCGTGTCATCTGTCGCTGTCG
CCTCCACAGTTAATATGCTTAAGCTTTGATAGAATAAATTATGGGCGAGGCCAGCCAGAG
TACTATCTGCGCATGCATGCAGTAGAGCCGTGTGTGGTAGCTAACAGCAAATTTGCATGG
CGTCCAGTGCAGAGGCCAGCCGGAACCGGCGCTGTACAACGGAGGCATTCTCAAGTTCGG
CAACAGCGACGACTCGGACGGGTACCGCACGACGGAGACCGGCGTCTTCTCCCCGGCGTT
CGTGGTGTACAACCTCAACAAAACCACCATGTACACCTTCTCATGCTGGGTGAAGCTGGA
AGGCGCGTACTCGGCTTTGATCACTGCGAGGCTGGCGCCGGACAACACCGGCGCGAGGTG
CATCGCCACGGTTCTTGCCAGGAGCGACTGCTGGGCCTTCGTCAAGGGCGGCTTCGTCCT
GGACTGGCCAACGCAGACCTCTGTCATCTTCTTCCAGAATGCTGACAAGACCCCCATGAA
GATCACCGTCGCGAGCGGGTCGCTGCAGCCGTTCACGACAGACCAGTGGGCGATGCACCA
GCAGGATACCATCCGGAAGAGGAGGAAGCGCGTGGCGACCATCCACGTCGCCGACCCGCA
AGGCGCCCGCGTGGTGGGCGCGTCCGTGTCGGTGCAGCAGACGGCCAAGGATTTCCCGAT
CGGGTCGGCGATCGCCTCCACCATCCTGGGGAACCAGGCGTACCAGCAGTGGTTCGTGGA
CCGCTTCAACGCGGCGGTGTTCGAGGACGAGCTCAAGTGGTACTCCACGGAGCCCATGTC
GGGTCTGCTCCGCTTCGACGTCCCCGACCAGATGCTTGCGTTCGTGCGGTCGCACCGCGT
GATGGTGCGGGGCCACAACATCTTCTGGGAGAACCAGGACGCGACGCCCCGGTGGGTGAA
GAACCTGACGGCGGACGACCTCCGGTCCGCCGTGAACACGCGCATCCAGAGCCTCATGAC
CCGGTACCGCGGCGAGTTCGCGCACTGGGACGTCAACAACGAGATGCTGCACTACAACTT
CTACGAGCAGCGCCTGGGCCCCAACGCGTCCATGGACTTCTTCAGCGTGGCGCAGGACGC
CGACCCGCTGGCCACGCTCTTCATGAACGAGTACAACGTCATCGAGACCTGCGACGACCC
CTTCTCCACCGTGGACACGTACGTGGCCAAGCTCAAGGAGCTCCGGTCCGGCGGCGCCAT
CCTGGAAGGGATCGGCCTGGAGGGCCACTTCTCCAAGCCCAACATCCCGCTGATGCGAGC
CATACTGGACAAGCTCGCCACCCTGGGGCTGCCCATCTGGTTCACCGAGATCGACATCAG
CAACAAGTTCGACGCGCAGACGCAGGCAGCGTACCTGGAGCAGGTGCTGCGGGAGGCCTA
CTCGCACCCGGCCGTCAGCGGCGTCATGCTGTGGACGGCGCTGCACCCCAGCGGGTGCTA
CCAGATGTGCCTCACGGACTGGAACCTCGCCAACCTGCCCACGGGGGACGTGGTCGACCG
CCTGCTGAACGAGTGGCGGACGCTGCAGGCGGGCGGGCAGACCGACGCGCACGGCGCCTA
CAGCTTCAGCGGATACCTCGGGGAGTACGTCCTCACGGTGAGCTACAACAACAGGACCAC
GCAGTCCACCTTCTCGCTGTCGCCGGGAGACGAGACCAGGCACATCAACGTTCAGATGTG
ACCGAGAGTCCGTGACGATCGATATGTGGGGTATAAACTAGGTGCTCTTGTGTTGTTTTG
CATTGCATTGGGCTCCTCTCCTGACTCCCTTGTCATGTACGGGTCGTAATGCTTGCTACT
GCTTACCCATTATACTATTATTACTAGCTGATGTAGTGACTGCAAGTGATTGTTGTGGAA
GAAGATTGCACAGTCAATCTATGTGTTCTTACTGTCCTGCGTGAAATTTACTGTAAAATC
TGGCATCCAACAGCTGGCATGTGTAATGTATTGCCATGTTTAATGATCCATCTTAGCGTT
ACTATCAAGAGATTTAAAATGAGACTTCACATTGATCTTC