Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92862
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:70505706:70511261:1 gene:SORBI_3001G425100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGTGGCTCTGCAATTTCCTGAAGGGGCCGAAGCCCGGCGAACCGAACCGCCGCCGG
CCCCAGGTGACGGCCGGAGAAGAGGAGGATGCGCTTTGGCACCAACGACCAGTTAGACCA
AAGAATGATCCACCTAGAAATGACAACGAAGAACTGGACCGTGCAATTGCAGAGTCTCTT
ACAGAGGATGTCAAACCCCCCAAAGAGAAAAACCATAAGGGAGACAACAACGACGAAGAT
CTTGCAAGAGCCATACAGGACAGTCTCAACATGAACCCTTACACGCCTTATAACCCCTAT
GCTCCCTCTCAGGCCCAACCTAGAGGGCACAGGGTATGTGGAAGCTGCAAGCATGAGATA
GGACATGGCCATTACTTGAGTTGCATGGGAATTTACTGGCACCCTCAGTGCTTCCGCTGC
AGCTCCTGCGGTCACCCTATCCGCGAGACCGAGTTCACCTTGCTAGGTACAGATCCATAC
CACAAGTTGTGCTACAAGGAGCTGCATCATCCAAAATGCGACGTCTGCCTTCAGTTTATC
CCAACGAACAGGAGTGGCTTGATAGAGTATAGAGCCCATCCATTCTGGGGCCAGAAGTAT
TGCCCTTTGCATGAGCATGACAGGACGCCACGTTGCTGCAGCTGTGAGAAAATGGAGCCA
AGGAACACAAAGTATATGTCACTGGGAGACGGCCGCAGCTTGTGTATGGAATGCCTGGGA
TCTGCAGTTATGGACACCGGTGAATGCCAGCCCCTATACCATTCTATCAGAGACTACTAT
GAGGGGATGAACATGAAACTGGACCAGCAGATACCCATGCTCTTGGTTGAACGACAAGCG
CTTAACGAAGCCATGGAAGGAGAGAGTAGAGGCCCACACCACATGCCTGAAACAAGGGGT
CTATGTCTGTCGGAGGAGCAGACTGTGAGCAGTATACTTAGGAGGCCCAGAATTGGTGGA
AACCGATTACTAGACATGAGAACTCAGCCACAAAAGCTGACTAGGAGATGTGAAGTTACT
GCAATACTTGTCTTGTATGGCCTCCCCAGGCTACTAACAGGCTCCATCCTCGCCCATGAG
CTGATGCACGGGTGGTTGCGCCTCAAAGGTTACCGAAACCTAAACGCGGAGGTTGAAGAA
GGCATATGCCAGGTCATGTCTTACCTGTGGCTGGAATCAGAGATTCTTCCGTCATCCTCA
AGGCACGCGCAGCCTTCATCCTCTTATGCCTCGTCCTCCTCTTCGTCTTACCCACCAACA
TCGTCCAAGAAGGGTGGAATATCTCATACTGAGAAGAAGCTGGGCGAGTTCTTCATGCAC
CAGATTGCCAATGACACGTCAACGGCCTATGGTGACGGTTTCAGAACTGCGTATGCTGCC
GTCAACAAGTATGGCCTTCGCCAAACACTGAACCATATACGCCTAACAGGAGGCTTCCCT
GTATAA

Peptide Sequence

PEP ID

OQU92862
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:70505706:70511261:1 gene:SORBI_3001G425100 transcript:OQU92862 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKWLCNFLKGPKPGEPNRRRPQVTAGEEEDALWHQRPVRPKNDPPRNDNEELDRAIAESL
TEDVKPPKEKNHKGDNNDEDLARAIQDSLNMNPYTPYNPYAPSQAQPRGHRVCGSCKHEI
GHGHYLSCMGIYWHPQCFRCSSCGHPIRETEFTLLGTDPYHKLCYKELHHPKCDVCLQFI
PTNRSGLIEYRAHPFWGQKYCPLHEHDRTPRCCSCEKMEPRNTKYMSLGDGRSLCMECLG
SAVMDTGECQPLYHSIRDYYEGMNMKLDQQIPMLLVERQALNEAMEGESRGPHHMPETRG
LCLSEEQTVSSILRRPRIGGNRLLDMRTQPQKLTRRCEVTAILVLYGLPRLLTGSILAHE
LMHGWLRLKGYRNLNAEVEEGICQVMSYLWLESEILPSSSRHAQPSSSYASSSSSSYPPT
SSKKGGISHTEKKLGEFFMHQIANDTSTAYGDGFRTAYAAVNKYGLRQTLNHIRLTGGFP
V

Transcript Sequence

Transcript ID

OQU92862
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:70505706:70511261:1 gene:SORBI_3001G425100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACATCGCTCATCGTTGCTTTTGCGCGTTGCAGTTGCAGCAGGAGGAGGACTGGCCTGAG
GCGAGATGCCGTGCCGCCCGCCCTTGGCTCGCTTCACCTTCAATTCTTTTCTTTCTGTCG
CGGCCAGCGCCTCCCCACCACGCCGCTTTATTCTCTAAGAACCCCGTCCTCCCCTCTCCT
CCTCCGTCCATTGCAGCTCTTGCTGCTGCTTCTTCTCCTCACCTCCCTCCTGCTCATCGT
AGACATCGCGATCGCCGTCGTTGATCTTGCCAAGCTCTTTGCTTCCGTTCTTTTTTCTTC
TTGGTTCAGTTTGCTCAGTGCTAGCTCGTCCTGTACGTGTCTATATATATGCTGTGTTGG
CGCCGGTTGCATAAATGGCCTACTCCTCGCGGTCCTGTGGTCGGTGCAACCACGGTAATC
TCTAACTCTCTTGTTTCTTTCCTAATTTACGAATGTTCTTGTCGCCATCAATAATACCCT
GTCTCTATTATCCTACTATGTATACTGCATGTGTAAAATTAAGTTGCCTAGCACTCTGTC
GTTGTCTGAACATATTTCTTACCTTCTTGTTTCCTGCCGCTTAATCCTTGTTGACTTAAA
CACTACTCATCTATCTTTTGTAAATGGGTATCCTGCTTAGGAAAAAGCAAAATGACCTTT
CATCTATCTTTCTCGGTTTCTAAAGCGTACTTACTAGAGGACGCCATGTCAAGGAAACAT
GGTTACTTTATGTTCAGTTCTTTCTTTTCTTCTGAAATGAAGGGCCCGAGTACGTGGTTC
ATCCTTTTCATGATAGAAATTGATTTGCGGCTTGATTAGTGTGTCAACATTCACCCTTTT
CATGATAGAAATTGATTTACGATTTGATTAGTGTGTCAACATCCAATCACAGACTAACCA
ATTTCATTAGAGACTGCTATCCACTAGACTCCCAATACATCTTGCTCCTTTTCTGAAAGT
TCTCTCTTGAGTTCGTCACCATTAAATCGATGACGCAACGAGTCAAACATAGAAGCGTCT
ATTATGGTGGGCTCGTCCTGCAAAAGAGGGTTCTGTCGGATCAACCTTAGCTAGCTCGTT
GATTGATCCTAACATCAGGCTGGCTCCACCCACTCGCATCACCTGATGAGCATTTCTAAC
AGTTACTGTCATGCATACATCAATGTTATTCAGAGGTGAGGAAAAAGTGGACTGAAACTG
ACTCTTACAATCCAGGATTAACTGAGCTCTGACAAGATAGCTTCACTGACCATGACTGCG
TGCCCTGTCAATTGGAGTAGAATATAGAAGGAAGACATCACTTTGATTAGCACAGCGTAG
AGCGGGGGGCCATGCTAACCCAAGCAATTTCGTATGGTGTTGTGTCCATGTGTTTGTTGC
TCTTGTCCAGTGCAGGTACACATATCTGGCCCTTCTAGTTTTAGTATTTGATTGATACAT
TCAGTCATGCTCCAAATATGGGCCTCATCTTATAACTGAAAAAAAAAACTAATTTGGCTA
TGAATTCCTGATAGTGTACAAGCACAGCTGCTGTATAGATTACTGACTGTTACATTGTAG
TATAGTGAACTTCCATTTTTACTACACATATTATCTGATGAAGGGAGTGCAGTAAAATTG
CAATGGTTTAATGTCCTTCACCACAAAAAAAAATCGAATTGTTCAAATTTATTTACTCTT
GGAGTAGCATAGGAGTACAACAATTTGCTTATATAATAATAAATAAGATATTCAATCCTT
CCTGCTTACTGTCAACTGACAGGAAATGGTAGGTGGCAAGTTGCTCTCAGTCTCAGCTTT
TCGGGTTTAGCCATGTGTGGGATCCTGTACATCGACATTTGGATTGGCCTATCTAATGTT
AATGTCGCTGCACACAGAGAGGAGATCCGGTTTCATGAAGTGGCTCTGCAATTTCCTGAA
GGGGCCGAAGCCCGGCGAACCGAACCGCCGCCGGCCCCAGGTGACGGCCGGAGAAGAGGA
GGATGCGCTTTGGCACCAACGACCAGTTAGACCAAAGAATGATCCACCTAGAAATGACAA
CGAAGAACTGGACCGTGCAATTGCAGAGTCTCTTACAGAGGATGTCAAACCCCCCAAAGA
GAAAAACCATAAGGGAGACAACAACGACGAAGATCTTGCAAGAGCCATACAGGACAGTCT
CAACATGAACCCTTACACGCCTTATAACCCCTATGCTCCCTCTCAGGCCCAACCTAGAGG
GCACAGGGTATGTGGAAGCTGCAAGCATGAGATAGGACATGGCCATTACTTGAGTTGCAT
GGGAATTTACTGGCACCCTCAGTGCTTCCGCTGCAGCTCCTGCGGTCACCCTATCCGCGA
GACCGAGTTCACCTTGCTAGGTACAGATCCATACCACAAGTTGTGCTACAAGGAGCTGCA
TCATCCAAAATGCGACGTCTGCCTTCAGTTTATCCCAACGAACAGGAGTGGCTTGATAGA
GTATAGAGCCCATCCATTCTGGGGCCAGAAGTATTGCCCTTTGCATGAGCATGACAGGAC
GCCACGTTGCTGCAGCTGTGAGAAAATGGAGCCAAGGAACACAAAGTATATGTCACTGGG
AGACGGCCGCAGCTTGTGTATGGAATGCCTGGGATCTGCAGTTATGGACACCGGTGAATG
CCAGCCCCTATACCATTCTATCAGAGACTACTATGAGGGGATGAACATGAAACTGGACCA
GCAGATACCCATGCTCTTGGTTGAACGACAAGCGCTTAACGAAGCCATGGAAGGAGAGAG
TAGAGGCCCACACCACATGCCTGAAACAAGGGGTCTATGTCTGTCGGAGGAGCAGACTGT
GAGCAGTATACTTAGGAGGCCCAGAATTGGTGGAAACCGATTACTAGACATGAGAACTCA
GCCACAAAAGCTGACTAGGAGATGTGAAGTTACTGCAATACTTGTCTTGTATGGCCTCCC
CAGGCTACTAACAGGCTCCATCCTCGCCCATGAGCTGATGCACGGGTGGTTGCGCCTCAA
AGGTTACCGAAACCTAAACGCGGAGGTTGAAGAAGGCATATGCCAGGTCATGTCTTACCT
GTGGCTGGAATCAGAGATTCTTCCGTCATCCTCAAGGCACGCGCAGCCTTCATCCTCTTA
TGCCTCGTCCTCCTCTTCGTCTTACCCACCAACATCGTCCAAGAAGGGTGGAATATCTCA
TACTGAGAAGAAGCTGGGCGAGTTCTTCATGCACCAGATTGCCAATGACACGTCAACGGC
CTATGGTGACGGTTTCAGAACTGCGTATGCTGCCGTCAACAAGTATGGCCTTCGCCAAAC
ACTGAACCATATACGCCTAACAGGAGGCTTCCCTGTATAATAAGATAGAAAAAAGAGAAA
ATGTCCATGCTGGACGCAACACAAAGATCATATGGATATCAAAGGTTATATACATATTGG
GATCAAGTTGGCTATGGAAGCATAGTGATTCAGTTTCGGTGACCTTGAGTTTTCAAAGAG
GTCCTGTCAGAGTAAATCAGAAAAGGAGCTGTATTTGCTCGAATTAATTGGAAGGAATTG
GCGGTGCCCAAGTGTAATAAGTTCGCTAAAGTACTAATGTAATGCACTGTTACTCACACT
AATATAATGAAGTGTATACTC