Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92860
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:70476063:70478917:1 gene:SORBI_3001G424600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTTTCAACTGAGAAAAGAAGTATTTTACCTGTTGGAGACATCAGTCAGACAATATCT
GATGATAAAGCAGATATTGCAGTGCTAGAAGAGCCAGAACATCTTACTTGGTACCATCAT
GGACGGAGGTGGAAAAGCAAGTTCCCAAAAGTTATAGGTGTTGTTCACACAAACTATTTG
GAATACGTGAAAAGAGAGAAAAATGGATATATCAGTGCGTTTATCTTAAAACACATTAAT
TCTTGGGTTACAGACATCTACTGTCATAAGGTTATAAGATTGTCTGCAGCAACTCAGGAT
GTTCCTAGGTCTGTGATTTGTAATGTTCATGGAGTTAACCCCAAATTTATTGAAATTGGC
AAATTGAAACATCAGGAGCTATGCCAAAGAGAACAAGCATTCTTCAAGGGTGCATATTAT
ATTGGAAAGATGGTTTGGAGTAAAGGTTACACAGAGCTTCTTCATCTTCTTCATAAGCAC
CAAATGGAATTGTCTGTTCTTAAAATGGAGTTGTATGGCAGTGGGGAAGATGCTGATGAA
GTAAAAGCATCAGCTGAGCGACTGAGCTTAGATATTAGAGTCTATCCAGGCCGTGATCAT
GGAGATTCAATATTTCACGACTACAAGGTTTTCATAAACCCAAGCACAACTGATGTGGTA
TGCACAACAACTGCAGAAGCTTTGGCGATGGGGAAGATTGTGATCTGTGCAAACCATCCT
TCAAATGATTTTTTCAAAAGATTTCCTAATTGTCACATGTACAGTACTGAGAAAGAGTTT
GTGACACTAACAATGAAAGCTTTGGGAGAAGAACCTATCCCACTGTCAGATGATTTGAGG
CATGAGCTTTCCTGGGAGGCAGCAACAGAAAGATTCGTTAGGGTTGCCGATATTGCACCA
ACTATGCCTGTGGGGCAACAACCACCAGCTTCTCCGCATTTCATGCGCATCTCCCCAGAC
AACCTACAGAAGAACATGGAAGAGGCATCAGCATTTTTCCATAACACTATCTCTGGGATT
GAAACTGCCCGTTGTGTGTTCGGTGCAATACCAAACACGTTGCAGCCGGATGAACAGCAA
TGCAAGGAACTTGGGTGGAAATTGCAGGGATAA

Peptide Sequence

PEP ID

OQU92860
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:70476063:70478917:1 gene:SORBI_3001G424600 transcript:OQU92860 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFSTEKRSILPVGDISQTISDDKADIAVLEEPEHLTWYHHGRRWKSKFPKVIGVVHTNYL
EYVKREKNGYISAFILKHINSWVTDIYCHKVIRLSAATQDVPRSVICNVHGVNPKFIEIG
KLKHQELCQREQAFFKGAYYIGKMVWSKGYTELLHLLHKHQMELSVLKMELYGSGEDADE
VKASAERLSLDIRVYPGRDHGDSIFHDYKVFINPSTTDVVCTTTAEALAMGKIVICANHP
SNDFFKRFPNCHMYSTEKEFVTLTMKALGEEPIPLSDDLRHELSWEAATERFVRVADIAP
TMPVGQQPPASPHFMRISPDNLQKNMEEASAFFHNTISGIETARCVFGAIPNTLQPDEQQ
CKELGWKLQG

Transcript Sequence

Transcript ID

OQU92860
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:70476063:70478917:1 gene:SORBI_3001G424600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAATATGATGGTTGTACAGGTATGGATTACCATGGTTTACTCCTTCGCTGTAAACCATAC
GCAGACCCCCACCCTTTCCCTACCAAAGATGATGGCTTACCTGATTCTGAATTCTGGGAT
AGCTCGTTCATGTCTATAAACAAGCATCTCGTGAATTTGTGTTAGCGACGGAATTTAAAC
GTAGAACAGTGTGCTCGATACCAGTGAAATAGATGTTTTCAACTGAGAAAAGAAGTATTT
TACCTGTTGGAGACATCAGTCAGACAATATCTGATGATAAAGCAGATATTGCAGTGCTAG
AAGAGCCAGAACATCTTACTTGGTACCATCATGGACGGAGGTGGAAAAGCAAGTTCCCAA
AAGTTATAGGTGTTGTTCACACAAACTATTTGGAATACGTGAAAAGAGAGAAAAATGGAT
ATATCAGTGCGTTTATCTTAAAACACATTAATTCTTGGGTTACAGACATCTACTGTCATA
AGGTTATAAGATTGTCTGCAGCAACTCAGGATGTTCCTAGGTCTGTGATTTGTAATGTTC
ATGGAGTTAACCCCAAATTTATTGAAATTGGCAAATTGAAACATCAGGAGCTATGCCAAA
GAGAACAAGCATTCTTCAAGGGTGCATATTATATTGGAAAGATGGTTTGGAGTAAAGGTT
ACACAGAGCTTCTTCATCTTCTTCATAAGCACCAAATGGAATTGTCTGTTCTTAAAATGG
AGTTGTATGGCAGTGGGGAAGATGCTGATGAAGTAAAAGCATCAGCTGAGCGACTGAGCT
TAGATATTAGAGTCTATCCAGGCCGTGATCATGGAGATTCAATATTTCACGACTACAAGG
TTTTCATAAACCCAAGCACAACTGATGTGGTATGCACAACAACTGCAGAAGCTTTGGCGA
TGGGGAAGATTGTGATCTGTGCAAACCATCCTTCAAATGATTTTTTCAAAAGATTTCCTA
ATTGTCACATGTACAGTACTGAGAAAGAGTTTGTGACACTAACAATGAAAGCTTTGGGAG
AAGAACCTATCCCACTGTCAGATGATTTGAGGCATGAGCTTTCCTGGGAGGCAGCAACAG
AAAGATTCGTTAGGGTTGCCGATATTGCACCAACTATGCCTGTGGGGCAACAACCACCAG
CTTCTCCGCATTTCATGCGCATCTCCCCAGACAACCTACAGAAGAACATGGAAGAGGCAT
CAGCATTTTTCCATAACACTATCTCTGGGATTGAAACTGCCCGTTGTGTGTTCGGTGCAA
TACCAAACACGTTGCAGCCGGATGAACAGCAATGCAAGGAACTTGGGTGGAAATTGCAGG
GATAACATTAGCTTTTCTTGCGATGTTGTTGTCATGGACAATAGGATTAACCAG