Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92735
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:68512147:68515522:-1 gene:SORBI_3001G399400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCTAAAGAGGGCGCTGGACGTGGAGGAGGAGGTGGTGGACGGCGACGAAGACGAG
CTCGCCGGCTGCCCCGACGCCAAGCGCCGCCGGACGTTCGTCAATAGCTCGATGCAGGAG
GCCATTGGCGCGCAGTACATGCAGAGGCATCTGCCCAAGCTGGAGCCATTTCTGCGCAGA
GTCGTGCAGGAGGAGGTGCATAATGTTCTTATCCGACACATCGATTCCGCAAACAGGCTC
CCACTTCAACTAAAGACAACCAGCAAACGGTACAAGCTGCAGTTCCAGGGAAACCTGCCG
CAGACGCTTTTCACAGGCAACAGGGTGGAGGCGGAGAACAAGCAGCCGCTCCGGCTAGTC
CTGACCGACGCCGCCACCAACCAGACGGTCACCTCCGGTCCCTTGTCCTCGATGAAGGTC
GAGCTCCTCGTCCTCGACGGCGACTTCAACGCCGACGAGCGGCTGGAGCACACGGAGAAG
GAGTTCAGCGAGAGCGTCGTGTTCGAGAGGGAAGGCAAGAGGCCGCTCCTATCCGGCGAG
GTGATCATCGTGCTCGAGAAGGGCACCGCCTCCATCCGCGACATCTCCTTCACGGATAAC
TCCAGCTGGATACGGAGCCGCAAGTTCAGGCTTGGCGCCAGGATGTCCAGGGCTAGTACC
ATCGAAGAACGGGTGCAGGAAGCTGTGAGCAATCCGTTCCTGGTGAAGGATCACCGTGGA
GAAGTGTACAAGAAGCACCATCCACCTGCATTAGCCGACGACGTGTGGCGTCTGGAGAAG
ATCGGGAAAGACGGCGTATTCCACAAGAAGCTCGCTGACTTTGGAATCCACACTGTTCAA
GACTTCCTCAGGAACTTGGTGATGGATCAGTACGGACTGCGCAGCTTGCTTGGCAGCGGC
ATGTCGAACAAGATGTGGGAATCCACGGTGGAGCACGCCCGGGAGTGCGTGCTGGACGAC
AAGCTCTACTCCTACTGCAGCGGGCACGGGATCGTCCTCCTGTTCAACTGCATCCACGAA
GTCGTCGGCGTGATCGTCGGGAGCCACTGCTTCACCTTGAGCGCTCTCACTCCGACGCAG
AAGGCGCTGGTGGTGAAGCTGCAGCAGGACGCGTACAAGTTCCCGGACCGCATAGCCGAG
TTCAAGGTGCAGTCGCAGAGCGCCGCGGATCAGCAGCCACCCGCCGCCGCGGTCCAGGCC
CCGCCGGCGCCGTTGCCTGTGCCCGCGGCGCAGATGCTCGGCCTCCCACACGGACACGGC
GTCGTGGTCCAGCCTTCGGCAGGCGCGCCGGCGAGCTCGCACGACGGCCATGGCCTGCTG
CTGAACCCGCAGCTCCTTCAGCACCACCAGCAGCAGCAGCCGCAGCCGCTGAGCGAGGCC
CTGGAGGACGTGCTGCAGTCGGCCAGCGCGGCGCACCAGCTCAACGCCGCCGAGCCGTGG
TTCCCTTCGTTCGGGGCCGGCGGGTTCGACGCGCGGGACCCGTTCGACGTGCAGTTCAGC
GGGTCGCAGCCGTGCGGGCTGCTGCTCTCCAGCACCGGCGCCAGGTTGTGA

Peptide Sequence

PEP ID

OQU92735
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:68512147:68515522:-1 gene:SORBI_3001G399400 transcript:OQU92735 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDLKRALDVEEEVVDGDEDELAGCPDAKRRRTFVNSSMQEAIGAQYMQRHLPKLEPFLRR
VVQEEVHNVLIRHIDSANRLPLQLKTTSKRYKLQFQGNLPQTLFTGNRVEAENKQPLRLV
LTDAATNQTVTSGPLSSMKVELLVLDGDFNADERLEHTEKEFSESVVFEREGKRPLLSGE
VIIVLEKGTASIRDISFTDNSSWIRSRKFRLGARMSRASTIEERVQEAVSNPFLVKDHRG
EVYKKHHPPALADDVWRLEKIGKDGVFHKKLADFGIHTVQDFLRNLVMDQYGLRSLLGSG
MSNKMWESTVEHARECVLDDKLYSYCSGHGIVLLFNCIHEVVGVIVGSHCFTLSALTPTQ
KALVVKLQQDAYKFPDRIAEFKVQSQSAADQQPPAAAVQAPPAPLPVPAAQMLGLPHGHG
VVVQPSAGAPASSHDGHGLLLNPQLLQHHQQQQPQPLSEALEDVLQSASAAHQLNAAEPW
FPSFGAGGFDARDPFDVQFSGSQPCGLLLSSTGARL

Transcript Sequence

Transcript ID

OQU92735
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:68512147:68515522:-1 gene:SORBI_3001G399400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTAACGGTGCAAGCCGTCGTCTCAGCTCTCAGGTGAATTTGTGAGTGAGCCGCCAAGTG
GTCTCGACTTCTCGAGTGGGTGAGTTAGCGCCCCCGCGTTGGCTTGCACGTGGCCATCCA
TGGACCTAAAGAGGGCGCTGGACGTGGAGGAGGAGGTGGTGGACGGCGACGAAGACGAGC
TCGCCGGCTGCCCCGACGCCAAGCGCCGCCGGACGTTCGTCAATAGCTCGATGCAGGAGG
CCATTGGCGCGCAGTACATGCAGAGGCATCTGCCCAAGCTGGAGCCATTTCTGCGCAGAG
TCGTGCAGGAGGAGGTGCATAATGTTCTTATCCGACACATCGATTCCGCAAACAGGCTCC
CACTTCAACTAAAGACAACCAGCAAACGGTACAAGCTGCAGTTCCAGGGAAACCTGCCGC
AGACGCTTTTCACAGGCAACAGGGTGGAGGCGGAGAACAAGCAGCCGCTCCGGCTAGTCC
TGACCGACGCCGCCACCAACCAGACGGTCACCTCCGGTCCCTTGTCCTCGATGAAGGTCG
AGCTCCTCGTCCTCGACGGCGACTTCAACGCCGACGAGCGGCTGGAGCACACGGAGAAGG
AGTTCAGCGAGAGCGTCGTGTTCGAGAGGGAAGGCAAGAGGCCGCTCCTATCCGGCGAGG
TGATCATCGTGCTCGAGAAGGGCACCGCCTCCATCCGCGACATCTCCTTCACGGATAACT
CCAGCTGGATACGGAGCCGCAAGTTCAGGCTTGGCGCCAGGATGTCCAGGGCTAGTACCA
TCGAAGAACGGGTGCAGGAAGCTGTGAGCAATCCGTTCCTGGTGAAGGATCACCGTGGAG
AAGTGTACAAGAAGCACCATCCACCTGCATTAGCCGACGACGTGTGGCGTCTGGAGAAGA
TCGGGAAAGACGGCGTATTCCACAAGAAGCTCGCTGACTTTGGAATCCACACTGTTCAAG
ACTTCCTCAGGAACTTGGTGATGGATCAGTACGGACTGCGCAGCTTGCTTGGCAGCGGCA
TGTCGAACAAGATGTGGGAATCCACGGTGGAGCACGCCCGGGAGTGCGTGCTGGACGACA
AGCTCTACTCCTACTGCAGCGGGCACGGGATCGTCCTCCTGTTCAACTGCATCCACGAAG
TCGTCGGCGTGATCGTCGGGAGCCACTGCTTCACCTTGAGCGCTCTCACTCCGACGCAGA
AGGCGCTGGTGGTGAAGCTGCAGCAGGACGCGTACAAGTTCCCGGACCGCATAGCCGAGT
TCAAGGTGCAGTCGCAGAGCGCCGCGGATCAGCAGCCACCCGCCGCCGCGGTCCAGGCCC
CGCCGGCGCCGTTGCCTGTGCCCGCGGCGCAGATGCTCGGCCTCCCACACGGACACGGCG
TCGTGGTCCAGCCTTCGGCAGGCGCGCCGGCGAGCTCGCACGACGGCCATGGCCTGCTGC
TGAACCCGCAGCTCCTTCAGCACCACCAGCAGCAGCAGCCGCAGCCGCTGAGCGAGGCCC
TGGAGGACGTGCTGCAGTCGGCCAGCGCGGCGCACCAGCTCAACGCCGCCGAGCCGTGGT
TCCCTTCGTTCGGGGCCGGCGGGTTCGACGCGCGGGACCCGTTCGACGTGCAGTTCAGCG
GGTCGCAGCCGTGCGGGCTGCTGCTCTCCAGCACCGGCGCCAGGTTGTGAGAGAGGCCAA
CAGCCCAGCGTTTCATCAGGACGGCGTCTCGCCGGACACGTGGCCGGCATGTGGCCCCGT
TGCGTCGCGCGGAACGAGAGGACCAGGGCAACCGGCGGCCCGGCGCCGGCCGGCGTTTGG
GTTGGATGCCGAGTTCTGGCCAGCTGCAGCTGCAGCAGAGCATGCATGGGTCGGGTCGGT
GCACTCTGACTGATTGTCTGCTAAAGTTGATGAAGAGAAGATATAGTAACCAGTAGTGCA
ATTGGTGGTAGGATCAGATGTCATCTTTTGTCATTTTGGGATGTAACATGAGTGATGAGT
AGTGAGAAGAACACACAGTTGTGGGGCGTTCGACTGTTCACCAGAGTCCCCTTCCCCTGT
CTGTAAAAGCATAAAAAGGGTGCTTTGTTGTTTTCCTTTTTCTATTGCTTGTTCATCGTA
AGATATTGTGGGAAAGTTAAATATGATCTCCCAAAGTCCCCATAGGGTAGATCGATCATA
TACGTTCTCTAACATGAACATGGGGCCTGTCCGGAGTACTGGCCATCAACGGCACGCAAA
TAGTTCAGCAGTTCGGTTCTTCAGGCCAAGGTAGCTGGCATGAATGATGAGTTCAAAAGT
TCCAACGTTTCC