Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92721
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:68231943:68234973:-1 gene:SORBI_3001G396800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCCCGCCTCTTAACCAGATCAGCGGCGGCGCGCCTCGTCTCCCGCCTCCACCGC
AAGACGCTACGCACTGCTCACCGCCCCCTCTCCCACGCCGCCGCCTTGGCGTCCCTCCTG
GGGCCCACTGATGGCCTCCCCCACGCCGCCGACTCCACGCTCCTCCGCGTTCCGGTGCGG
TGGTTCTCCTCTCCGTCCACGGAGGCGTTGGCGGAGGCTCCGATGACCGCTGACGGCCTG
ACGGTAGATTCGATCGCCGACAAGGGGTGGACCATCCTTCCCGAAGCCGACAGCGACTGG
CGCAGCCACGCCGCCGCCGTCGCGCAGTCCGTCAAGCTCATCAAGAAGCGCCTCAAGTGG
GGATGGATACTTGAGAGAACGAAGCAATTGGCTGTGGTGTTGGAGAGGCCAGACCTCTGG
GAAGATCCAGTTTTTGCTGGGAGGGTTAGCCGTGAGCAGGGTGAGCTCATGGGCAAGATT
AAGTCAGTGAACCAGTTTGAGCAGGAATTGATTGAACACATTGAGATGCTACGGCTTGCA
CGTGAAGAAAACGATAATGAACTTGAGATGGAAAGCATGAGGGCTTTAGCCGATATGAGA
AGAAGTGCAAAGGAGAAAGAACTTAATGCGTTACTTTCTGGAGACAATGACTCTTGTCCT
TGCTTCATTGAGGTTCAGGCAGGGGCTGGTGGCACCGAGAGTATGGACTGGGCTGCAATG
GTCATGAACATGTATAGGTCATGGGCCCAGCGACGAGGATATACAGTCACTGTGGTAGAA
GAGATGCCTGGTGAAGTAGCAGGAATCAAGGAACTGATCTTAAACAGCTGCTATTTCCAG
AGGGCCACTATCAAAGTTGATGGTGAATATGCATTTGGATATGCCAAAGCTGAAGTAGGA
GTTCATAGATTGGTGCGAATTTCTCCATTTGACAGTGGAAAGCGACGGCACACTTCCTTT
GCAGCTGTTGCTGTAATACCTATTCTTGGGGATGCTGCTAGCCGATACCAGATCAAAGAT
TCTGATCTTAGGATAGAACGTTTCCGTTCTGGTGGCCCTGGTGGTCAGCATGCCAACACT
ACAGAGAGTGCCATTCGAATTGTGCACATCCCAACTGGTATAAGTGCAACATGTCAAAAT
GAAAGATCACAGCACATGAACAAGGCATCAGCAATGGCAGTGCTCCAATCTCGTCTTGAT
CAGCTTGAGATTGCTCGCCAAGCACAGATGAATGCAGAGCACACACAATCACTCAATGAA
ATCAGCTGGGGCAACCAAATAAGATCTTATGTTCTCCATCCATACCGTATGGTCAAAGAT
CTCCGGACGAACTATGAAGTATCTGACCCCGATTCAGTCCTAGAAGGAGACATAGATGAT
TTCATCTTGAATTATTTGTCTTCATCACTGGATGAAGCTGATGTAAGTACCTGA

Peptide Sequence

PEP ID

OQU92721
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:68231943:68234973:-1 gene:SORBI_3001G396800 transcript:OQU92721 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASRLLTRSAAARLVSRLHRKTLRTAHRPLSHAAALASLLGPTDGLPHAADSTLLRVPVR
WFSSPSTEALAEAPMTADGLTVDSIADKGWTILPEADSDWRSHAAAVAQSVKLIKKRLKW
GWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRLA
REENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQAGAGGTESMDWAAM
VMNMYRSWAQRRGYTVTVVEEMPGEVAGIKELILNSCYFQRATIKVDGEYAFGYAKAEVG
VHRLVRISPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQHANT
TESAIRIVHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNE
ISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLSSSLDEADVST

Transcript Sequence

Transcript ID

OQU92721
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:68231943:68234973:-1 gene:SORBI_3001G396800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCCCGCCTCTTAACCAGATCAGCGGCGGCGCGCCTCGTCTCCCGCCTCCACCGC
AAGACGCTACGCACTGCTCACCGCCCCCTCTCCCACGCCGCCGCCTTGGCGTCCCTCCTG
GGGCCCACTGATGGCCTCCCCCACGCCGCCGACTCCACGCTCCTCCGCGTTCCGGTGCGG
TGGTTCTCCTCTCCGTCCACGGAGGCGTTGGCGGAGGCTCCGATGACCGCTGACGGCCTG
ACGGTAGATTCGATCGCCGACAAGGGGTGGACCATCCTTCCCGAAGCCGACAGCGACTGG
CGCAGCCACGCCGCCGCCGTCGCGCAGTCCGTCAAGCTCATCAAGAAGCGCCTCAAGTGG
GGATGGATACTTGAGAGAACGAAGCAATTGGCTGTGGTGTTGGAGAGGCCAGACCTCTGG
GAAGATCCAGTTTTTGCTGGGAGGGTTAGCCGTGAGCAGGGTGAGCTCATGGGCAAGATT
AAGTCAGTGAACCAGTTTGAGCAGGAATTGATTGAACACATTGAGATGCTACGGCTTGCA
CGTGAAGAAAACGATAATGAACTTGAGATGGAAAGCATGAGGGCTTTAGCCGATATGAGA
AGAAGTGCAAAGGAGAAAGAACTTAATGCGTTACTTTCTGGAGACAATGACTCTTGTCCT
TGCTTCATTGAGGTTCAGGCAGGGGCTGGTGGCACCGAGAGTATGGACTGGGCTGCAATG
GTCATGAACATGTATAGGTCATGGGCCCAGCGACGAGGATATACAGTCACTGTGGTAGAA
GAGATGCCTGGTGAAGTAGCAGGAATCAAGGAACTGATCTTAAACAGCTGCTATTTCCAG
AGGGCCACTATCAAAGTTGATGGTGAATATGCATTTGGATATGCCAAAGCTGAAGTAGGA
GTTCATAGATTGGTGCGAATTTCTCCATTTGACAGTGGAAAGCGACGGCACACTTCCTTT
GCAGCTGTTGCTGTAATACCTATTCTTGGGGATGCTGCTAGCCGATACCAGATCAAAGAT
TCTGATCTTAGGATAGAACGTTTCCGTTCTGGTGGCCCTGGTGGTCAGCATGCCAACACT
ACAGAGAGTGCCATTCGAATTGTGCACATCCCAACTGGTATAAGTGCAACATGTCAAAAT
GAAAGATCACAGCACATGAACAAGGCATCAGCAATGGCAGTGCTCCAATCTCGTCTTGAT
CAGCTTGAGATTGCTCGCCAAGCACAGATGAATGCAGAGCACACACAATCACTCAATGAA
ATCAGCTGGGGCAACCAAATAAGATCTTATGTTCTCCATCCATACCGTATGGTCAAAGAT
CTCCGGACGAACTATGAAGTATCTGACCCCGATTCAGTCCTAGAAGGAGACATAGATGAT
TTCATCTTGAATTATTTGTCTTCATCACTGGATGAAGCTGATGTAAGTACCTGA