Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92711
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:68081211:68086313:1 gene:SORBI_3001G394800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATGCGGCTCCTGTCCCCCTCCACGCCGCCCCCACTCTTCCCGAGCCCCGGCCCG
AAGGCACCCGCCTCCGTCTCCGCATCGTCTTCCTCGTACTTGTCTGTCCGCTTGCGCCGC
GCGCGCGCGGCGTCTGCAGCGTCTGGCGCGGCCGCGTCGGGCGGGTCCGACCGGGACGGC
GGACGCTTCGAGGGGGAGGCGATGAGCGGGGCATTCGACAGGGGCCTCGCGGAGATCGCG
AGGAAGGTGCCGCTCTTCGAGCCCGCAGCGGACGGGGAGCTCGCCGCCGCGGCCGGCGAG
CGGCCGTTGCCTATCAATCTCGAGCTCTGGCTCTACCGCGTCAAAGTGCACACCAGGAAG
TTCGAGTTCCCTGAAGCAGAGAAGCTTCTCGACAAGTGTATCTCATTCTGGCCTGAAGAC
GGACGTCCGTATGTGGCACTGGGGAAGTTGTTCAGCAAGCAGTCAAGGTATGACAAAGCT
AGAGCGGTGTACGAAAGGGGATGCCAAGCAACGCAAGGCGAAAACCCATACATTTGGCAG
TGCTGGGCAGTCCTAGAAAGCAAGGGTGGAAATATTCGAAGGGCACGCGAGCTATTTGAT
GCTGCTACTGTGGCTGATGCAAAGCACATTGCTGCTTGGCACGGGTGGGCAATTTTAGAA
ATAAAGCAAGGAAATATAAAAAAAGCACGGAACCTACTTGGGAAAGCCCTGAAATATTGT
GGAGGAAATGAGTATATTTACCAAACTCTTGCTTTGCTTGAAGCTAAAGCAGAGCGCTTT
GAACAAGCAAGGACTTTGTTCGAACAAGCCACTCAATCCAATCCGAAAAGTTGTGCAAGC
TGGCTAGCTTGGGCTCAGGTAGAAATGCGTGCAGGAAACAATACCATGGCCAGAAATCTC
TTTGAGAAAGCTGTCCAGGCTAGTCCTAAAAACCGTTTTTCATGGCATGTATGGGCACTA
TTTGAGGCAAATGAAGGTAATATTGACAGTGCAAGGAAGTTGCTTAAGATTGGACATGCT
GTAAATCCTAAGGACCCTGTAATCCTCCAGTCACTTGCACTGCTGGAATACAACTTTTCA
TCTGCGAATGTTGCTCGTGTGTTATTCAGAAAAGCATCTCAAATTGATCCAAGGCATCAG
CCAGTTTGGATAGCTTGGGGATGGATGGAATGGAAAGAAGGAAATGCAAGAACAGCAAGG
GCCCTCTATCAAAGAGCTTTGTCAGTTAATTCAACAAATGAATGTGCTGCTCGTTGCCTT
CAGGCTTGGGGGGTCCTAGAACAGCGTGCTGGTAACTACACGGCAGCCAGAAGATTGTTG
AGGTCTTCGTTGAATATAAACTCTCAAAGTGAGGTGACATGGATGACATGGGCAGCACTT
GAGGAGGAACAGGGAGATCCAGTTCGAGCTGAAGAAATTCGGAACCTTTACTTTCAGCAG
CGCACTGAAGTTGTGGATGATGCCTCCTGGGTCATGGGCTTCCTCGACATCATCGACCCT
GCCCTAGACAGCGTGAAGAAGCTGCTAAACCTAGATCAGCCTTCTGGGCCAACGAGGCAA
GATGATGTTAAAAGCACTGCCAGGAGTTCTGCAGCTAGGGAGTCTTCAGAAACCTCTGCG
GCTGTAGGTTCAGATACCCCTGGCCTTACGAGCAATGATGCTGGTAACAACGGGAGGGAA
GCAACTAGGACTCCAACAAATGATTTCGATTTGGATCGTTTCATCAAAAAGAGGCTGGCC
CTCGACCCGGCGGAGCTGGATGCCGTGCTCGAGGGCTCTGACCCGAGGGGTGTTGTTTCT
CAGAGGAGGAAACAGCGGCTGCCCAGGAAGCCACTCCCTGTCCCGTAA

Peptide Sequence

PEP ID

OQU92711
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:68081211:68086313:1 gene:SORBI_3001G394800 transcript:OQU92711 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMRLLSPSTPPPLFPSPGPKAPASVSASSSSYLSVRLRRARAASAASGAAASGGSDRDG
GRFEGEAMSGAFDRGLAEIARKVPLFEPAADGELAAAAGERPLPINLELWLYRVKVHTRK
FEFPEAEKLLDKCISFWPEDGRPYVALGKLFSKQSRYDKARAVYERGCQATQGENPYIWQ
CWAVLESKGGNIRRARELFDAATVADAKHIAAWHGWAILEIKQGNIKKARNLLGKALKYC
GGNEYIYQTLALLEAKAERFEQARTLFEQATQSNPKSCASWLAWAQVEMRAGNNTMARNL
FEKAVQASPKNRFSWHVWALFEANEGNIDSARKLLKIGHAVNPKDPVILQSLALLEYNFS
SANVARVLFRKASQIDPRHQPVWIAWGWMEWKEGNARTARALYQRALSVNSTNECAARCL
QAWGVLEQRAGNYTAARRLLRSSLNINSQSEVTWMTWAALEEEQGDPVRAEEIRNLYFQQ
RTEVVDDASWVMGFLDIIDPALDSVKKLLNLDQPSGPTRQDDVKSTARSSAARESSETSA
AVGSDTPGLTSNDAGNNGREATRTPTNDFDLDRFIKKRLALDPAELDAVLEGSDPRGVVS
QRRKQRLPRKPLPVP

Transcript Sequence

Transcript ID

OQU92711
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:68081211:68086313:1 gene:SORBI_3001G394800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGGGCAGTCCCGTCAGTCCAGGCCCCTCGTCCTTCTCCTTCCCTCTCTCAGGGGCGCGCC
TCGCTCACCCTCCCCACTGGCGAATTTGCTACAGGCAAGCGCTCCACTCGAGCTCGGCCC
GCATCCATGGCGATGCGGCTCCTGTCCCCCTCCACGCCGCCCCCACTCTTCCCGAGCCCC
GGCCCGAAGGCACCCGCCTCCGTCTCCGCATCGTCTTCCTCGTACTTGTCTGTCCGCTTG
CGCCGCGCGCGCGCGGCGTCTGCAGCGTCTGGCGCGGCCGCGTCGGGCGGGTCCGACCGG
GACGGCGGACGCTTCGAGGGGGAGGCGATGAGCGGGGCATTCGACAGGGGCCTCGCGGAG
ATCGCGAGGAAGGTGCCGCTCTTCGAGCCCGCAGCGGACGGGGAGCTCGCCGCCGCGGCC
GGCGAGCGGCCGTTGCCTATCAATCTCGAGCTCTGGCTCTACCGCGTCAAAGTGCACACC
AGGAAGTTCGAGTTCCCTGAAGCAGAGAAGCTTCTCGACAAGTGTATCTCATTCTGGCCT
GAAGACGGACGTCCGTATGTGGCACTGGGGAAGTTGTTCAGCAAGCAGTCAAGGTATGAC
AAAGCTAGAGCGGTGTACGAAAGGGGATGCCAAGCAACGCAAGGCGAAAACCCATACATT
TGGCAGTGCTGGGCAGTCCTAGAAAGCAAGGGTGGAAATATTCGAAGGGCACGCGAGCTA
TTTGATGCTGCTACTGTGGCTGATGCAAAGCACATTGCTGCTTGGCACGGGTGGGCAATT
TTAGAAATAAAGCAAGGAAATATAAAAAAAGCACGGAACCTACTTGGGAAAGCCCTGAAA
TATTGTGGAGGAAATGAGTATATTTACCAAACTCTTGCTTTGCTTGAAGCTAAAGCAGAG
CGCTTTGAACAAGCAAGGACTTTGTTCGAACAAGCCACTCAATCCAATCCGAAAAGTTGT
GCAAGCTGGCTAGCTTGGGCTCAGGTAGAAATGCGTGCAGGAAACAATACCATGGCCAGA
AATCTCTTTGAGAAAGCTGTCCAGGCTAGTCCTAAAAACCGTTTTTCATGGCATGTATGG
GCACTATTTGAGGCAAATGAAGGTAATATTGACAGTGCAAGGAAGTTGCTTAAGATTGGA
CATGCTGTAAATCCTAAGGACCCTGTAATCCTCCAGTCACTTGCACTGCTGGAATACAAC
TTTTCATCTGCGAATGTTGCTCGTGTGTTATTCAGAAAAGCATCTCAAATTGATCCAAGG
CATCAGCCAGTTTGGATAGCTTGGGGATGGATGGAATGGAAAGAAGGAAATGCAAGAACA
GCAAGGGCCCTCTATCAAAGAGCTTTGTCAGTTAATTCAACAAATGAATGTGCTGCTCGT
TGCCTTCAGGCTTGGGGGGTCCTAGAACAGCGTGCTGGTAACTACACGGCAGCCAGAAGA
TTGTTGAGGTCTTCGTTGAATATAAACTCTCAAAGTGAGGTGACATGGATGACATGGGCA
GCACTTGAGGAGGAACAGGGAGATCCAGTTCGAGCTGAAGAAATTCGGAACCTTTACTTT
CAGCAGCGCACTGAAGTTGTGGATGATGCCTCCTGGGTCATGGGCTTCCTCGACATCATC
GACCCTGCCCTAGACAGCGTGAAGAAGCTGCTAAACCTAGATCAGCCTTCTGGGCCAACG
AGGCAAGATGATGTTAAAAGCACTGCCAGGAGTTCTGCAGCTAGGGAGTCTTCAGAAACC
TCTGCGGCTGTAGGTTCAGATACCCCTGGCCTTACGAGCAATGATGCTGGTAACAACGGG
AGGGAAGCAACTAGGACTCCAACAAATGATTTCGATTTGGATCGTTTCATCAAAAAGAGG
CTGGCCCTCGACCCGGCGGAGCTGGATGCCGTGCTCGAGGGCTCTGACCCGAGGGGTGTT
GTTTCTCAGAGGAGGAAACAGCGGCTGCCCAGGAAGCCACTCCCTGTCCCGTAATCCAGA
TCGGTCTGTCTCATTTCCACCGGTAAAATCCACTAACAGTAGCAGGTATACGTGGATATG
TGTGAGGAGAGGACGACCCCTGCCGCTGCCATAGCAATCACCTGTTAATTGTCATTCCAG
GCACGTGTATGTAATTCTGCCACCATTTGTAGTATAAGTCTAGCTCTGTACATAAATTAG
ACTCTCTTTATCTACATAATTCCCCCGAGTAATTAGTCGAGAAATATTCTGATAAATGCC
AATGCCATT