Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92678
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:67515668:67519797:-1 gene:SORBI_3001G388000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGTCGAGGAAGGAGGAGGAGAGGAACGAGCGGATCGTGCGGGGGCTCCTC
AAGCTGCCGCCCAACCGCAGATGCGTCAACTGCAACGGGCTCGGGCCGCAGTACGTGTGC
ACCAGCTTCTGGACCTTCGTCTGCGTCTCCTGCAGCGGCATCCACCGAGAGTTCACGCAC
CGTGTGAAATCCGTCTCCATGTCAACGTTCAGCACGCAAGAGGTCGAGGCTCTCCAGAAG
GGTGGGAACCAGCGTGCCAAGGAATCATTCTTGAAGGACTTTGATACCCAGAAAATGAGG
CTACCTGATAGCAGCAACATTGGCAGTCTTAGGGAATTCATAAAAGCTGTCTATGTGGAG
AGACGGTATGCTGGTGGTAGATTTTCTGAAAGGCCTCCAAGAGATAAACAGAACCAAAAG
GCCCATGAGGAAGAGCATAGAAGGCCAAGTTCTTACCATTCATTTTCACAGAGCCCACCT
TATGGTTGCCAGTATGAAGAGAGGCGTAATGGCAAGCAATCTGCATTTCTAAGTAGGAAG
CCTGGTTCAGATAGGGGGCATGAGGGGAAGATTTCTGGATATTCTTACAGTTCACATAGC
TTGCATGAGAGAATGTTTCAGGATGGATTTACTGGTGAGAGTTGTGGACCGAGGACTTCT
AACTGCTCAGGGTCAAGCACGGGTGATACAGCTAAATCTGCACCACAATCACCTAATTTT
CCTGATAGTATATGTTTCAGCCCCCCCGTGCTACAAGATCAATCAAATATACAGAGTTCT
TGTGGACTCACTAGTTCACAGAGAACTGTATCAGCAGGAAACATAGATTCTATCTCTCTT
AAATCAGGCAAGTCAAGCTTATCTGATTTGATTTTTGAGGATGATAATGTTCACAGAACT
GAAACAGCCAAAAATTCCGCTGCTCCAAGTTTCATGGCCTTTCCTGATGATATTAGTGCT
CCAAATCAAGATATCTTTGATTCCAAAGCTACTCAGGAACATCATGTAACTACCACTGAT
CAATCTGTTGATCTATTTTCGAACATGCTTACTGAAACTCCATCTGCTGATAAAGTGATA
CCAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTCGATACACCTCCAGAACAA
AAGCAACCTGCACTCACTGGGCTTTCTTATGTTGCTACCACAAGCATTGATAAACAGGCT
CCGAATCGTGATTTGTTTTCATTTGAATCAAATGCTGAGCTAACATGGTTTCAGAGCTCT
AAGGATGATACTTCAGTTACCAGTCAGAATCAGTCTACTGCTACATCTCTTGATACAGGC
AGTTCTCAGCCTTGGAGTACTTTCGATGCCTCCAGTGCTAGCACCCAGTACACTGTCAAG
GGAGATCTATCATTAATGACTTCTACATTGCAAGAGCCTAAAAGACCAATAGACAGAAAT
TGTTCTCAGCTTTGGCATTCATTTGATGATGCTAATGAGGTCGTTTGTGCTAAACCACGA
ATTGAAGACCACAGCAATGTAGTAAGCATTTCCCTTTCAACCAGCAATCCATTTATGTGC
TCTGTAGTTTCAGAGGAATCTTATGATGATGATTCCCAGAAAGTATTCATGGACGAATTG
TCACCTAATACATCGATTGCTGCTTCCGCAGATTCATCTCTGGGTGGGCCCTCTAATAAG
CAGATGCCATTAAATCCATTTGATCTTCCATTTGACACTCAGTTGGGGACTCCTGATCTG
TTCATGGACGTAAGTTCATTGCAAGAGCCCTTGCCTAGTCCAGATCTGCCAGCTTTCCTT
GATGGTTTACCTGAAAGATGGTTCCCCAGCAGTTCTTGTGCTTATGATCCATCAGCGTCA
CATGGTGGACTACCGTGCCTTGTCGAGCAGGGACCGAACTTTTCTTTGCGGTAA

Peptide Sequence

PEP ID

OQU92678
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:67515668:67519797:-1 gene:SORBI_3001G388000 transcript:OQU92678 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAASRKEEERNERIVRGLLKLPPNRRCVNCNGLGPQYVCTSFWTFVCVSCSGIHREFTH
RVKSVSMSTFSTQEVEALQKGGNQRAKESFLKDFDTQKMRLPDSSNIGSLREFIKAVYVE
RRYAGGRFSERPPRDKQNQKAHEEEHRRPSSYHSFSQSPPYGCQYEERRNGKQSAFLSRK
PGSDRGHEGKISGYSYSSHSLHERMFQDGFTGESCGPRTSNCSGSSTGDTAKSAPQSPNF
PDSICFSPPVLQDQSNIQSSCGLTSSQRTVSAGNIDSISLKSGKSSLSDLIFEDDNVHRT
ETAKNSAAPSFMAFPDDISAPNQDIFDSKATQEHHVTTTDQSVDLFSNMLTETPSADKVI
PAAPSMDNAGWATFDTPPEQKQPALTGLSYVATTSIDKQAPNRDLFSFESNAELTWFQSS
KDDTSVTSQNQSTATSLDTGSSQPWSTFDASSASTQYTVKGDLSLMTSTLQEPKRPIDRN
CSQLWHSFDDANEVVCAKPRIEDHSNVVSISLSTSNPFMCSVVSEESYDDDSQKVFMDEL
SPNTSIAASADSSLGGPSNKQMPLNPFDLPFDTQLGTPDLFMDVSSLQEPLPSPDLPAFL
DGLPERWFPSSSCAYDPSASHGGLPCLVEQGPNFSLR

Transcript Sequence

Transcript ID

OQU92678
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:67515668:67519797:-1 gene:SORBI_3001G388000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGTCGAGGAAGGAGGAGGAGAGGAACGAGCGGATCGTGCGGGGGCTCCTC
AAGCTGCCGCCCAACCGCAGATGCGTCAACTGCAACGGGCTCGGGCCGCAGTACGTGTGC
ACCAGCTTCTGGACCTTCGTCTGCGTCTCCTGCAGCGGCATCCACCGAGAGTTCACGCAC
CGTGTGAAATCCGTCTCCATGTCAACGTTCAGCACGCAAGAGGTCGAGGCTCTCCAGAAG
GGTGGGAACCAGCGTGCCAAGGAATCATTCTTGAAGGACTTTGATACCCAGAAAATGAGG
CTACCTGATAGCAGCAACATTGGCAGTCTTAGGGAATTCATAAAAGCTGTCTATGTGGAG
AGACGGTATGCTGGTGGTAGATTTTCTGAAAGGCCTCCAAGAGATAAACAGAACCAAAAG
GCCCATGAGGAAGAGCATAGAAGGCCAAGTTCTTACCATTCATTTTCACAGAGCCCACCT
TATGGTTGCCAGTATGAAGAGAGGCGTAATGGCAAGCAATCTGCATTTCTAAGTAGGAAG
CCTGGTTCAGATAGGGGGCATGAGGGGAAGATTTCTGGATATTCTTACAGTTCACATAGC
TTGCATGAGAGAATGTTTCAGGATGGATTTACTGGTGAGAGTTGTGGACCGAGGACTTCT
AACTGCTCAGGGTCAAGCACGGGTGATACAGCTAAATCTGCACCACAATCACCTAATTTT
CCTGATAGTATATGTTTCAGCCCCCCCGTGCTACAAGATCAATCAAATATACAGAGTTCT
TGTGGACTCACTAGTTCACAGAGAACTGTATCAGCAGGAAACATAGATTCTATCTCTCTT
AAATCAGGCAAGTCAAGCTTATCTGATTTGATTTTTGAGGATGATAATGTTCACAGAACT
GAAACAGCCAAAAATTCCGCTGCTCCAAGTTTCATGGCCTTTCCTGATGATATTAGTGCT
CCAAATCAAGATATCTTTGATTCCAAAGCTACTCAGGAACATCATGTAACTACCACTGAT
CAATCTGTTGATCTATTTTCGAACATGCTTACTGAAACTCCATCTGCTGATAAAGTGATA
CCAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTCGATACACCTCCAGAACAA
AAGCAACCTGCACTCACTGGGCTTTCTTATGTTGCTACCACAAGCATTGATAAACAGGCT
CCGAATCGTGATTTGTTTTCATTTGAATCAAATGCTGAGCTAACATGGTTTCAGAGCTCT
AAGGATGATACTTCAGTTACCAGTCAGAATCAGTCTACTGCTACATCTCTTGATACAGGC
AGTTCTCAGCCTTGGAGTACTTTCGATGCCTCCAGTGCTAGCACCCAGTACACTGTCAAG
GGAGATCTATCATTAATGACTTCTACATTGCAAGAGCCTAAAAGACCAATAGACAGAAAT
TGTTCTCAGCTTTGGCATTCATTTGATGATGCTAATGAGGTCGTTTGTGCTAAACCACGA
ATTGAAGACCACAGCAATGTAGTAAGCATTTCCCTTTCAACCAGCAATCCATTTATGTGC
TCTGTAGTTTCAGAGGAATCTTATGATGATGATTCCCAGAAAGTATTCATGGACGAATTG
TCACCTAATACATCGATTGCTGCTTCCGCAGATTCATCTCTGGGTGGGCCCTCTAATAAG
CAGATGCCATTAAATCCATTTGATCTTCCATTTGACACTCAGTTGGGGACTCCTGATCTG
TTCATGGACGTAAGTTCATTGCAAGAGCCCTTGCCTAGTCCAGATCTGCCAGCTTTCCTT
GATGGTTTACCTGAAAGATGGTTCCCCAGCAGTTCTTGTGCTTATGATCCATCAGCGTCA
CATGGTGGACTACCGTGCCTTGTCGAGCAGGGACCGAACTTTTCTTTGCGGTAA