Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92390
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:62430580:62433544:-1 gene:SORBI_3001G335800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCAAGTCCGAGGGGATCAATCCATACCTCGGCTGCAAAAGGAGCTTCCTTAGCT
TTCCAGAGCACAAGAACTAGCCAAAAATGCCGACTAGAATGGCAAAGGCCTTCTCCCATG
AGGCCACGGAATTTGGCGGCCAGATGGGGTGCGTGGCCAGCATGCTCCACATCTTCGACC
GCCGCCGCCTTCTCACCGGCCGACGACATGGTGACTGCCCTGGAACCAAGGACGAGGACG
AACTGCCTCCAGCAGGAGAAATCGTTCAGCAAAAGCAAAAGCAAAAGCATGACTGAGAAC
AGTACCTTCTCAACAGAATCATCGAGAGCATCTTCAGCATCGTCGTCCTGCTCTTCATTA
TCACCCCTGGCCAACAGCAAACCAGTACAGCAGAAGCTCCCTTGCATCAACGAGAAGCAT
GTCGTAGCAAGGAGTAGGACAATGAGGAGCTCGCGAAGCTTTAAGTCTTCAGATACAGAG
GTCAAATCCATACAGCAAAAAACTGATTTTAGAGATGTCGTGAAGGACTCCATCAACCAG
GACTCTCGTGTCCTGGCCATCAAGACTAAAATGATGGAACAGAGAGATGGACTGCACAAA
GACTCACCAAGGCCACTGCTTATATCCAAATCAACAGATGGAACTTATGTGATTGCTGTT
GATAGGAGCAATGTGCCTCCTGCATATGTCAATGAATCTAGCAGGCAGCAACGTTTATCA
TGTGATGATCGACAGCTGCTGCTGCAGGTAGAAGCTCAAGACAGCAAGATGCCTTCATCC
AAGCACATGGAGCTTCCTAGGCTGTCCTTGGACAGTAGGAATGAGTCTGTCAAGTCAAGT
TTGCATCAGAAGAACTTTGGTTATGCAAGAACCGATGACAGTCTCATTGATAATTTGAAA
TACCAAGAATCCCCGAGCCATCGGCGGGCCAGTGCTGTCGTTGCAAAGCTCATGGGATTG
GAAGAGACTCTCGATGCCCCTGGGTCTGCAAGATCACACAGACCAGACCGTCACACTCGA
AATAATTACCTGCCACACACCTCCAGGAGTATCTGCCATGACCTCAGTACATTGCAGCCG
AAGATTCAGCCTACAATACTGAAAACCAAACCTTCTCCGAGAATTGTCCCTGAAGCTGCA
GCTTGGAAGCAGCAGAAGATAAATACAGCTAGATATTATTCTAAAGAAGGGCCAAGTTCT
ACATCCATAAACGATAACGTAGAGAGGCTCATCAATCTCACATCGTCGGAATGTAGTAAG
GATTTGAGGGCTCTTAGGATACTCAGTGAGCTACACGCAAAGCGGAGTGATTACAATGCC
AGATCACTGAACACTCAGAAGGCAGCAGCTGGACAAACCAATAGTGCTCAACACTTCCAG
TCTCCAGTTGTAATCATGAAGCCGGCGAGAGGTATCGTGAAAAAGAATGCTTCAGTTGCT
ACCCTTGCAGGGACAAAAGTCCACAGAAAGTTGCGGCATGAAGAGAGCACTTTCACCACG
AAGACCGACAACAGTGACAGGACGAAGACCCATTCTCACAATCAAAGAGCTCATTCCAGG
CGAGAGGAAGATGTGGGCAGCACAAGTTCACCAAAGCCTTCTAGAATTTTGAGCCCAAGA
CTTGTGCGGAAGTCAGACTGTGGAAGGATCACTCAGCTGACAGTTCCACTGATGTCCCCA
GCCAAGACATCCAAAGAAGTATCTCCAAGAGGCAAACTAAGATCAAGGGCTTCACAATCA
AATAGCATCTGTGGCCATGATAAAGCCATGATTACTGAAAGCAAAATCAGTTTATCAAAG
CAGGTAGATACGAACATTATTAATTATTCAAATACTCTTAATGTCAACACAACATCCATC
CATCAAAGCAATACAACTTCAACATCGAATTATGAGGAAACACTTATCCTATGTACTGAC
AAGAACATCCATCCACTGGAGAACATACCGAGTCCTGTATCAGTCCTTGATGCCACATTC
TATCAAGATGTGATGTCGCCTTCTCTGAGGGGCATATCAAATTCTTTCAAAAGTGAGAAC
TTTATCTGTCAAGCAATTCTTCACACGACTCTGAGCACTATCCTTGGGTTCCAATCAATC
TAG

Peptide Sequence

PEP ID

OQU92390
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:62430580:62433544:-1 gene:SORBI_3001G335800 transcript:OQU92390 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPSPRGSIHTSAAKGASLAFQSTRTSQKCRLEWQRPSPMRPRNLAARWGAWPACSTSST
AAAFSPADDMVTALEPRTRTNCLQQEKSFSKSKSKSMTENSTFSTESSRASSASSSCSSL
SPLANSKPVQQKLPCINEKHVVARSRTMRSSRSFKSSDTEVKSIQQKTDFRDVVKDSINQ
DSRVLAIKTKMMEQRDGLHKDSPRPLLISKSTDGTYVIAVDRSNVPPAYVNESSRQQRLS
CDDRQLLLQVEAQDSKMPSSKHMELPRLSLDSRNESVKSSLHQKNFGYARTDDSLIDNLK
YQESPSHRRASAVVAKLMGLEETLDAPGSARSHRPDRHTRNNYLPHTSRSICHDLSTLQP
KIQPTILKTKPSPRIVPEAAAWKQQKINTARYYSKEGPSSTSINDNVERLINLTSSECSK
DLRALRILSELHAKRSDYNARSLNTQKAAAGQTNSAQHFQSPVVIMKPARGIVKKNASVA
TLAGTKVHRKLRHEESTFTTKTDNSDRTKTHSHNQRAHSRREEDVGSTSSPKPSRILSPR
LVRKSDCGRITQLTVPLMSPAKTSKEVSPRGKLRSRASQSNSICGHDKAMITESKISLSK
QVDTNIINYSNTLNVNTTSIHQSNTTSTSNYEETLILCTDKNIHPLENIPSPVSVLDATF
YQDVMSPSLRGISNSFKSENFICQAILHTTLSTILGFQSI

Transcript Sequence

Transcript ID

OQU92390
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:62430580:62433544:-1 gene:SORBI_3001G335800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCAAGTCCGAGGGGATCAATCCATACCTCGGCTGCAAAAGGAGCTTCCTTAGCT
TTCCAGAGCACAAGAACTAGCCAAAAATGCCGACTAGAATGGCAAAGGCCTTCTCCCATG
AGGCCACGGAATTTGGCGGCCAGATGGGGTGCGTGGCCAGCATGCTCCACATCTTCGACC
GCCGCCGCCTTCTCACCGGCCGACGACATGGTGACTGCCCTGGAACCAAGGACGAGGACG
AACTGCCTCCAGCAGGAGAAATCGTTCAGCAAAAGCAAAAGCAAAAGCATGACTGAGAAC
AGTACCTTCTCAACAGAATCATCGAGAGCATCTTCAGCATCGTCGTCCTGCTCTTCATTA
TCACCCCTGGCCAACAGCAAACCAGTACAGCAGAAGCTCCCTTGCATCAACGAGAAGCAT
GTCGTAGCAAGGAGTAGGACAATGAGGAGCTCGCGAAGCTTTAAGTCTTCAGATACAGAG
GTCAAATCCATACAGCAAAAAACTGATTTTAGAGATGTCGTGAAGGACTCCATCAACCAG
GACTCTCGTGTCCTGGCCATCAAGACTAAAATGATGGAACAGAGAGATGGACTGCACAAA
GACTCACCAAGGCCACTGCTTATATCCAAATCAACAGATGGAACTTATGTGATTGCTGTT
GATAGGAGCAATGTGCCTCCTGCATATGTCAATGAATCTAGCAGGCAGCAACGTTTATCA
TGTGATGATCGACAGCTGCTGCTGCAGGTAGAAGCTCAAGACAGCAAGATGCCTTCATCC
AAGCACATGGAGCTTCCTAGGCTGTCCTTGGACAGTAGGAATGAGTCTGTCAAGTCAAGT
TTGCATCAGAAGAACTTTGGTTATGCAAGAACCGATGACAGTCTCATTGATAATTTGAAA
TACCAAGAATCCCCGAGCCATCGGCGGGCCAGTGCTGTCGTTGCAAAGCTCATGGGATTG
GAAGAGACTCTCGATGCCCCTGGGTCTGCAAGATCACACAGACCAGACCGTCACACTCGA
AATAATTACCTGCCACACACCTCCAGGAGTATCTGCCATGACCTCAGTACATTGCAGCCG
AAGATTCAGCCTACAATACTGAAAACCAAACCTTCTCCGAGAATTGTCCCTGAAGCTGCA
GCTTGGAAGCAGCAGAAGATAAATACAGCTAGATATTATTCTAAAGAAGGGCCAAGTTCT
ACATCCATAAACGATAACGTAGAGAGGCTCATCAATCTCACATCGTCGGAATGTAGTAAG
GATTTGAGGGCTCTTAGGATACTCAGTGAGCTACACGCAAAGCGGAGTGATTACAATGCC
AGATCACTGAACACTCAGAAGGCAGCAGCTGGACAAACCAATAGTGCTCAACACTTCCAG
TCTCCAGTTGTAATCATGAAGCCGGCGAGAGGTATCGTGAAAAAGAATGCTTCAGTTGCT
ACCCTTGCAGGGACAAAAGTCCACAGAAAGTTGCGGCATGAAGAGAGCACTTTCACCACG
AAGACCGACAACAGTGACAGGACGAAGACCCATTCTCACAATCAAAGAGCTCATTCCAGG
CGAGAGGAAGATGTGGGCAGCACAAGTTCACCAAAGCCTTCTAGAATTTTGAGCCCAAGA
CTTGTGCGGAAGTCAGACTGTGGAAGGATCACTCAGCTGACAGTTCCACTGATGTCCCCA
GCCAAGACATCCAAAGAAGTATCTCCAAGAGGCAAACTAAGATCAAGGGCTTCACAATCA
AATAGCATCTGTGGCCATGATAAAGCCATGATTACTGAAAGCAAAATCAGTTTATCAAAG
CAGGTAGATACGAACATTATTAATTATTCAAATACTCTTAATGTCAACACAACATCCATC
CATCAAAGCAATACAACTTCAACATCGAATTATGAGGAAACACTTATCCTATGTACTGAC
AAGAACATCCATCCACTGGAGAACATACCGAGTCCTGTATCAGTCCTTGATGCCACATTC
TATCAAGATGTGATGTCGCCTTCTCTGAGGGGCATATCAAATTCTTTCAAAAGTGAGAAC
TTTATCTGTCAAGCAATTCTTCACACGACTCTGAGCACTATCCTTGGGTTCCAATCAATC
TAG