Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92371
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:62138561:62141402:1 gene:SORBI_3001G332900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAACCTTCTTCATGATCCTGCTATTACTATCACTGCTTCCCCTCCACTTGAGTGCC
GCGCCTCGCGACACTCTACTGCTGGGATCCTCGCTCTCTGTCGAGGAGCACCAGACCGAC
GTTCTGCAATCACCGGAAGGCACTTTCTCCTGTGGCTTCCACAGCATCTATGAAAGTGCC
TTCACCTTCTCGATATGGTACACCAACTCAGTGAACAAGACGGTCGTCTGGACCGCGAAC
CGTGACCGCCCCGTGCATGCCAGGGGCGCGGTGGTCACCCTGCGGAAGGACGGCACCATG
GTTCTCACGGACTATGATGGCGCAGTGGTGTGGCAAACAGAAGGAGACCTGGTGGGTGTT
CAGTACGCGAGGCTCCTGGACACTGGGAACCTAGTCATGGCGAACTCCAGCGGCATGGTT
GTGTGGCAGAGCTTCGATTCGCCAACAGACACCCTCCTGCCGACCCAACACATCACTTCA
ACTACGACGCTGGTTTCCACCACTCATCTGCATGTTCCAGGTCCCTACATATTCCATTTC
ACGGATTCATCGATACTGTCCCTCATTTATGATGATGCCGGTGTCCATGAAATATATTGG
CCAAACCCTGACAACGGAGAGTATCAGAATGATAGGAATAGGTATAACAGTACAAGGCTT
GGGTTTATAGATGATACTGGCAGATTTTTTTCAAGTGATTTCGCCAACCAGCAGCCACTT
GTTGCCTCTGATGAAGGTGTTGGGATCAAAAGAAGGCTTACTCTGGACCCCGATGGTAAT
CTCCGACTCTACAGCTTGAATGATTCAGATGGCAGATGGTCGGTTTCATGGATTGCAGTG
TCTCAGCCTTGCAATATTCATGGCTTGTGTGGTCCGAATGGGATCTGCCACTACTTTCCT
ACACCTACATGCTCTTGCCCACCAGGTTACGTGATGAGCCAACCTGGTAATTGGAGCCAA
GGCTGTAGACCTGTAGTAGACATTGTCTGTACTGCTAAGAAAGCGCAACCTGTCAAGTTC
TTGCGACTTCCAGGTACCGACTTTTGGGGATCCGATCAGCAGCATCCGGACAAAGTATCC
TTGCAGGCTTGCAAGAACATATGTAGGAAGGACTGCACCTGCAAAGGCTTTCAGTACCAG
CAAGGAACAGGGACATGCTATCCAAAGGCTTCCCTTTATAATGGGAAGGCATACACGGCA
CCTACAATATCGACGCCCATGATGTATCTCAAGCTACCAGTGGGCGTGAATATTTCAGGT
ATTTCAGTTCCCCAAACCAATGTGCTTATTTCACCAAGAAAGCAACATCTTGACTGTGGC
CAGATGAGCGCATCAACGTTGGAACTATTTCCAGAGATTCACAAGTCCAGCCAGGGGGAA
GCAAAATGGTTTTACTTCTATGGGTTTGCAGGTTCAATTTTTGTTCTTGAAGCCTTCTTC
ATTGCATCCGCATGGTGCTTTGTTTTGAGATGGGAGTTAGGAGCGTCCGAAATACAAGCA
GTTGAGGAAGGCTACAATGCCTTGACCAGTAATTTCAGAAGATACAGTTATAAAGAGTTG
GTCAAAGCAACAAGAAAGTTCAAAGATGAGCTTGGAAAAGGAGGCTCAGGGATTGTCTAC
AAGGGAGTCTTGGATGACAATCGAGAAGTTGCTGTTAAGATGCTGGAAAACGTAAGGCAA
TGCGAGGAGGAGTTTCAAGCAGAACTGCGCATAATTGGGAGGATTAATCATATGAATCTA
GTAAGGATATGGGGGGTTTGCTCTGAAAGCTCACACAGGATGTTGGTCACCGAGTATATT
GAGAATGGGTCATTAGCTCATGTCCTATTCAAAGGCCACATTCTGCTGGAGTGGAGGCAG
AGGTTTAATATTGCGTTAGGCGTGGCAAAGGGTTTGGCTTATCTTCACCATGAATGTCTT
GAGTGGGTAATACACTGTGATGTGAAGCCAGAGAACATACTGTTGGATCGGAATCTAGAA
CCCAAGATTGCTGACTTTGGGTTGGCGAAGCTGCTGAACAGAGGTTCCTCTAACCAGAAT
GTGTCAAGAGTTCGAGGAACCATAGGTTACATAGCTCCAGAGTGGATCAGCAGCCTCCAG
ATCACGGCCAAGGTTGACGTTTATAGCTATGGGGTTGTGCTTCTTGAGCTAGTCTTGGGA
AGACGCGTTCTCGACATGGCTCTAGCTGCTAATGAGGAGGTGCATAAGGTGCTTAGGAAG
TATGTAGCCATGCTAGCTCTTATGTTGGATAAAGAGGAACCCTCTTCAATTGCCGAGGTT
GTGGATTGCAGACTGAGTGGCCAATTCAACTACATGCAGGTAAGAACACTGATCAAATTG
GCTGTCTCATGCGTGGATGAAGACAGAAGCAAAAGGCCAACAATGGAATCTATAGTGCAA
ATGCTCCTTTTAGCTGATGAATCGTGTAGCATGTGCTAG

Peptide Sequence

PEP ID

OQU92371
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:62138561:62141402:1 gene:SORBI_3001G332900 transcript:OQU92371 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATFFMILLLLSLLPLHLSAAPRDTLLLGSSLSVEEHQTDVLQSPEGTFSCGFHSIYESA
FTFSIWYTNSVNKTVVWTANRDRPVHARGAVVTLRKDGTMVLTDYDGAVVWQTEGDLVGV
QYARLLDTGNLVMANSSGMVVWQSFDSPTDTLLPTQHITSTTTLVSTTHLHVPGPYIFHF
TDSSILSLIYDDAGVHEIYWPNPDNGEYQNDRNRYNSTRLGFIDDTGRFFSSDFANQQPL
VASDEGVGIKRRLTLDPDGNLRLYSLNDSDGRWSVSWIAVSQPCNIHGLCGPNGICHYFP
TPTCSCPPGYVMSQPGNWSQGCRPVVDIVCTAKKAQPVKFLRLPGTDFWGSDQQHPDKVS
LQACKNICRKDCTCKGFQYQQGTGTCYPKASLYNGKAYTAPTISTPMMYLKLPVGVNISG
ISVPQTNVLISPRKQHLDCGQMSASTLELFPEIHKSSQGEAKWFYFYGFAGSIFVLEAFF
IASAWCFVLRWELGASEIQAVEEGYNALTSNFRRYSYKELVKATRKFKDELGKGGSGIVY
KGVLDDNREVAVKMLENVRQCEEEFQAELRIIGRINHMNLVRIWGVCSESSHRMLVTEYI
ENGSLAHVLFKGHILLEWRQRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDRNLE
PKIADFGLAKLLNRGSSNQNVSRVRGTIGYIAPEWISSLQITAKVDVYSYGVVLLELVLG
RRVLDMALAANEEVHKVLRKYVAMLALMLDKEEPSSIAEVVDCRLSGQFNYMQVRTLIKL
AVSCVDEDRSKRPTMESIVQMLLLADESCSMC

Transcript Sequence

Transcript ID

OQU92371
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:62138561:62141402:1 gene:SORBI_3001G332900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTCATCAGGCCAACCATCTGTTCAGACTTCAGACTTCAGCCATGGCAACCTTCTTCATG
ATCCTGCTATTACTATCACTGCTTCCCCTCCACTTGAGTGCCGCGCCTCGCGACACTCTA
CTGCTGGGATCCTCGCTCTCTGTCGAGGAGCACCAGACCGACGTTCTGCAATCACCGGAA
GGCACTTTCTCCTGTGGCTTCCACAGCATCTATGAAAGTGCCTTCACCTTCTCGATATGG
TACACCAACTCAGTGAACAAGACGGTCGTCTGGACCGCGAACCGTGACCGCCCCGTGCAT
GCCAGGGGCGCGGTGGTCACCCTGCGGAAGGACGGCACCATGGTTCTCACGGACTATGAT
GGCGCAGTGGTGTGGCAAACAGAAGGAGACCTGGTGGGTGTTCAGTACGCGAGGCTCCTG
GACACTGGGAACCTAGTCATGGCGAACTCCAGCGGCATGGTTGTGTGGCAGAGCTTCGAT
TCGCCAACAGACACCCTCCTGCCGACCCAACACATCACTTCAACTACGACGCTGGTTTCC
ACCACTCATCTGCATGTTCCAGGTCCCTACATATTCCATTTCACGGATTCATCGATACTG
TCCCTCATTTATGATGATGCCGGTGTCCATGAAATATATTGGCCAAACCCTGACAACGGA
GAGTATCAGAATGATAGGAATAGGTATAACAGTACAAGGCTTGGGTTTATAGATGATACT
GGCAGATTTTTTTCAAGTGATTTCGCCAACCAGCAGCCACTTGTTGCCTCTGATGAAGGT
GTTGGGATCAAAAGAAGGCTTACTCTGGACCCCGATGGTAATCTCCGACTCTACAGCTTG
AATGATTCAGATGGCAGATGGTCGGTTTCATGGATTGCAGTGTCTCAGCCTTGCAATATT
CATGGCTTGTGTGGTCCGAATGGGATCTGCCACTACTTTCCTACACCTACATGCTCTTGC
CCACCAGGTTACGTGATGAGCCAACCTGGTAATTGGAGCCAAGGCTGTAGACCTGTAGTA
GACATTGTCTGTACTGCTAAGAAAGCGCAACCTGTCAAGTTCTTGCGACTTCCAGGTACC
GACTTTTGGGGATCCGATCAGCAGCATCCGGACAAAGTATCCTTGCAGGCTTGCAAGAAC
ATATGTAGGAAGGACTGCACCTGCAAAGGCTTTCAGTACCAGCAAGGAACAGGGACATGC
TATCCAAAGGCTTCCCTTTATAATGGGAAGGCATACACGGCACCTACAATATCGACGCCC
ATGATGTATCTCAAGCTACCAGTGGGCGTGAATATTTCAGGTATTTCAGTTCCCCAAACC
AATGTGCTTATTTCACCAAGAAAGCAACATCTTGACTGTGGCCAGATGAGCGCATCAACG
TTGGAACTATTTCCAGAGATTCACAAGTCCAGCCAGGGGGAAGCAAAATGGTTTTACTTC
TATGGGTTTGCAGGTTCAATTTTTGTTCTTGAAGCCTTCTTCATTGCATCCGCATGGTGC
TTTGTTTTGAGATGGGAGTTAGGAGCGTCCGAAATACAAGCAGTTGAGGAAGGCTACAAT
GCCTTGACCAGTAATTTCAGAAGATACAGTTATAAAGAGTTGGTCAAAGCAACAAGAAAG
TTCAAAGATGAGCTTGGAAAAGGAGGCTCAGGGATTGTCTACAAGGGAGTCTTGGATGAC
AATCGAGAAGTTGCTGTTAAGATGCTGGAAAACGTAAGGCAATGCGAGGAGGAGTTTCAA
GCAGAACTGCGCATAATTGGGAGGATTAATCATATGAATCTAGTAAGGATATGGGGGGTT
TGCTCTGAAAGCTCACACAGGATGTTGGTCACCGAGTATATTGAGAATGGGTCATTAGCT
CATGTCCTATTCAAAGGCCACATTCTGCTGGAGTGGAGGCAGAGGTTTAATATTGCGTTA
GGCGTGGCAAAGGGTTTGGCTTATCTTCACCATGAATGTCTTGAGTGGGTAATACACTGT
GATGTGAAGCCAGAGAACATACTGTTGGATCGGAATCTAGAACCCAAGATTGCTGACTTT
GGGTTGGCGAAGCTGCTGAACAGAGGTTCCTCTAACCAGAATGTGTCAAGAGTTCGAGGA
ACCATAGGTTACATAGCTCCAGAGTGGATCAGCAGCCTCCAGATCACGGCCAAGGTTGAC
GTTTATAGCTATGGGGTTGTGCTTCTTGAGCTAGTCTTGGGAAGACGCGTTCTCGACATG
GCTCTAGCTGCTAATGAGGAGGTGCATAAGGTGCTTAGGAAGTATGTAGCCATGCTAGCT
CTTATGTTGGATAAAGAGGAACCCTCTTCAATTGCCGAGGTTGTGGATTGCAGACTGAGT
GGCCAATTCAACTACATGCAGGTAAGAACACTGATCAAATTGGCTGTCTCATGCGTGGAT
GAAGACAGAAGCAAAAGGCCAACAATGGAATCTATAGTGCAAATGCTCCTTTTAGCTGAT
GAATCGTGTAGCATGTGCTAGGATGACGTTCTACATAATGGAAGTGCCCAACAGGTGGAA
ACATTAAGCATAATGAGAGCTATTGGAGTATAATTTTTTAGCCTTCATTGTGTGGCTGTT
TATGTGTATGCTTAAGTACTTTTCTCAAATAATATACACTTATGTACTGCTATTGACTAA
ATTTCTCCAGTCATCTTCTTTGTTTTTTCCTACTATTGATTACTGATGTTCTGCTAGCGC
ATTTCTTACTTGAATATGTACAACCTCTTTATGAAGCACAAAACACATCTCTAGGTGAAT
TGACAAAAAAGGAAAACAGTTGCAGGCATTAAAAAAGTAGTTTGAAACTATTCCAGCTAT
ATTCATTTTCATTTTGACACCC