Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92160
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:58466713:58471753:-1 gene:SORBI_3001G302200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGGGCTGCCGCCGGTCGCCAGGCGGCGCCCGCTCGCGACGGCGTCGCTGCTGCTG
CTGCTGTTGCTCGCGGTGACCGCGGCGGCGCGCGAGGAGCGGGGCCTCGCGGCGCGGCGG
GTGGAGGGCCCGCCGCCGCGGCACCGCCACGCGTACGCCGCCATGATGTACATGGGCACG
CCGCGGGACTACGAGTTCTACGTCGCCGTGCGCGTCATGATGCGCTCCCTCACCCGGGTC
CAAGCCGACGCCGACCGCGTCCTCATCGCCTCCGCCGACGTCCCGCGCGACTGGGTCCGC
GCAATGACAGAAGAGGATGGCTTGAGGGTGGTCATAGTGGAGAACCTCAGGAATCCTTAT
GAGGGCAACCTAGGAGGGATCAACAAGAGGTTCAAGCTGACACTGAACAAGCTTTATGCG
TGGACCCTGGTGGACTATGAGCGTGTCGTCATGATTGACTCCGATAACATCTTCCTCCAA
AACACAGACGAGCTATTCCAATGTGGACAGTTCTGTGCTGTTTTCATCAACCCGTGCTAC
TTCCACACTGGTCTTTTCGTGCTCCAGCCTTCTATTGATGTATTCAAGGGCATGCTTCAT
GACCTGGAGACTGGCCGTGAAAACTCAGATGGTGCTGACCAAGGCTTTTTGGTTGGGTGC
TACCCAGACTTGCTCGACAAACCAATGTTTCACCCTCCGGAGAATGGTACAAAGCTCAAT
GGGACCTATCGCCTTCCTCTCGGCTATCAAATGGATGCATCCTACTACTATCTCAAGCTA
CATTGGCATGTCCCGTGTGGGCCAAACAGTGTCATCACATTCCCCAGCGCACCTTGGTTT
AAACCTTGGTACTGGTGGTCTTGGCCGGTCTTGCCATTAGGACTTTCCTGGCACAAGCAG
CGCTGGGACGATCTTGGGTATGCTGCTGAAATGCCAGTGGTTCTGATGGAGGTTTTAATG
TACATAGTTATCATAACAGTCACCAGATTGGCAAGGCCAGGGATGACCAAACTGTGTTAT
AACCGACGGCCTGAGAAGCAAAGTGCCCTGGTGCAGTGGCTGATCAAGCTGGCTGCAATT
GTGGCTATGGTGGCTGCCTATTCCATTCCATTCTTTGTGATCCCACGCACAGTTCACCCG
ATCATGGGCTGGTCCATCTACCTATTTGGTGCCCTTGCCTTGTCAGTGCTCGTTATCAAT
GTTTTTCTGCTCCCACCACTTGACGTGCTTACAACGTGGCTTGCGATTGTCGGCATGCTC
TTCGTTATGGCATTCCCATGGTACCATGATGGTGTTGTGAGGGCTCTGGCAGTCTTTGGA
TATGCATTTTGCTCAGCGCCATTCTTGTGGGCATCCATGGTGAGGATGATGGACTCAGTG
CAGACGATGCTGGAGAGGGATCCATTCTTCCCCCGGATTGGTGAACCAGCTCAGGAGACT
GAATTCAGCAAGCTGTTCTGA

Peptide Sequence

PEP ID

OQU92160
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:58466713:58471753:-1 gene:SORBI_3001G302200 transcript:OQU92160 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAGLPPVARRRPLATASLLLLLLLAVTAAAREERGLAARRVEGPPPRHRHAYAAMMYMGT
PRDYEFYVAVRVMMRSLTRVQADADRVLIASADVPRDWVRAMTEEDGLRVVIVENLRNPY
EGNLGGINKRFKLTLNKLYAWTLVDYERVVMIDSDNIFLQNTDELFQCGQFCAVFINPCY
FHTGLFVLQPSIDVFKGMLHDLETGRENSDGADQGFLVGCYPDLLDKPMFHPPENGTKLN
GTYRLPLGYQMDASYYYLKLHWHVPCGPNSVITFPSAPWFKPWYWWSWPVLPLGLSWHKQ
RWDDLGYAAEMPVVLMEVLMYIVIITVTRLARPGMTKLCYNRRPEKQSALVQWLIKLAAI
VAMVAAYSIPFFVIPRTVHPIMGWSIYLFGALALSVLVINVFLLPPLDVLTTWLAIVGML
FVMAFPWYHDGVVRALAVFGYAFCSAPFLWASMVRMMDSVQTMLERDPFFPRIGEPAQET
EFSKLF

Transcript Sequence

Transcript ID

OQU92160
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:58466713:58471753:-1 gene:SORBI_3001G302200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCACTCGCCAGCACTAAACGTGTAGGAGTAGAGTAGTACTATTTGAGTCGTCGAGCGCG
TGTAGAACGGGTCCGGTCCATCCCGGCCGTCCCACCAACCCACACCGGAGAGTCCGCAGC
GCACCGCCCAGTCGTCTCCCTCTCCCCGTCTCCGCTCCCGACATGCCACTTGCTGATTGA
CGCTTCTCCTACGAGCAAGGAAACAAGAAAGAGAAAGCGTCCCCGCCCGCTGCCGAGGAG
GAGAGGGAGGGACGACGACGGAGGAGGCGTTGTTGCCTTTTAGAGCAACTAGCCCCAAAA
CAGGCCCCCTACTTTTTATTTAGGTGCTCTTCTATTTTTTAGGAGTTCTGTTTTTTTTTT
TGCCTGAACTCCAACAGGAGCCCTCAAAACAAAGCCCCTATTCTTAATTCCTCTATTTCC
TAACACATACTCCGTATGTGCATATGTGAGAACATCATATTATATAATAATTTATTTAAA
CTATATCAATAAAGCAACATGCGTAAAATAATAAACAAAAAATCCAAATATTTAAATTTG
AATTTAAACATAAGTTTGGTCCAAATTTGATGATATTCATCCAGAAGGCTATAGTTCAAA
AGACTAGAGCTCAAAAGAACTAAAACTAGACCTGCAACCTTGCAACTTGCATTGGGTTGA
CAAAATCAACAGACACAATAAAAGCACCATATGTAAAATTAACTTGCGCCATGTCAGGTC
CACAAATACTCCACAAGATTTGCTTCAGTAGAACACGAAGTATCAAAAAATCTCCTCCGC
CACTAGCTTCATATCCTCCACTGCTACCACCGAAGGTACTGTTGAAGGCCGCCATCTCTT
CGGCTGCAATTTGAGCCCTCATTGCTATCACATACTGTCTTTTGGGATGGGTCCAATGTG
TTGAGATCACAAAACATAATTTTTTGTTCTTGCTCCCATAGCCGATTCTTCTCCTCATTT
TCAATCTTGCGTGCTTCAAGTGATAATTTGCGCTCATGCAACACCTTGCTCTCCTGCCAT
CTATCCTCTCTGACTTTCTCTTTCTCTGCAAGAAATTTCTCTATCAAATTATAATTCGTT
GGTTCTCCTTTCTTCAGTTTATCCTTTGCTTGCTTCCTCCCCATAGGCCTTTTACTGCTA
GGCATGGAAGAGTCAGGGGTTTGGCTCTTTCTACTCTCACCATCTTCTGGAGTTGCTCTA
AGCCGCGGCCACCCGACGCGTAGGCGTAGCCGAACCGTCGCCGTCGCTGGACGGCGGGGC
CGACCGGAGACCCGGTCCCGCTTGTCAGATACAGTACGTACCAGGTGGGCGTCGTAGGCT
GGACCGGGACAAGGGGAAAGCATCTGCTACTCCGGCAGGGCAGGCGGCTGGGCAGGTCTC
TCTCCCACAACTCATAAATAAACGCCGCCCCGTTTCCCCCTCCCTCTCCTCTGCTGACCT
CCCTCCTCTCTCTCTCTCTCCCCTGTTCTTCTCTCGCTTTTGCCAACGAGAAGCATCGAG
GCGACGCATCCAATCCAAGCATCTCCCCCCTCTCATCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCAAACACAACCCGCGATTCCGCGGCGAACATACCCAGCGGTGCCGACGACTGCCGA
GCAAGGCAAATAGGCCACCAAGCCAGCGCCTCGCAAGCGAGCGAGCCTGCCCCGGGCCCC
GGCGCGGCGCGGCGCCTATTCGTTCGCTGATCACCACCAGGCTAGTCAACGGCCGGCTGA
GGCCACCGACCCTCGCTCGCGTGGGAGGAGTGAGTGCGGACGCGGGGACGGCGGCGATGG
CGGGGCTGCCGCCGGTCGCCAGGCGGCGCCCGCTCGCGACGGCGTCGCTGCTGCTGCTGC
TGTTGCTCGCGGTGACCGCGGCGGCGCGCGAGGAGCGGGGCCTCGCGGCGCGGCGGGTGG
AGGGCCCGCCGCCGCGGCACCGCCACGCGTACGCCGCCATGATGTACATGGGCACGCCGC
GGGACTACGAGTTCTACGTCGCCGTGCGCGTCATGATGCGCTCCCTCACCCGGGTCCAAG
CCGACGCCGACCGCGTCCTCATCGCCTCCGCCGACGTCCCGCGCGACTGGGTCCGCGCAA
TGACAGAAGAGGATGGCTTGAGGGTGGTCATAGTGGAGAACCTCAGGAATCCTTATGAGG
GCAACCTAGGAGGGATCAACAAGAGGTTCAAGCTGACACTGAACAAGCTTTATGCGTGGA
CCCTGGTGGACTATGAGCGTGTCGTCATGATTGACTCCGATAACATCTTCCTCCAAAACA
CAGACGAGCTATTCCAATGTGGACAGTTCTGTGCTGTTTTCATCAACCCGTGCTACTTCC
ACACTGGTCTTTTCGTGCTCCAGCCTTCTATTGATGTATTCAAGGGCATGCTTCATGACC
TGGAGACTGGCCGTGAAAACTCAGATGGTGCTGACCAAGGCTTTTTGGTTGGGTGCTACC
CAGACTTGCTCGACAAACCAATGTTTCACCCTCCGGAGAATGGTACAAAGCTCAATGGGA
CCTATCGCCTTCCTCTCGGCTATCAAATGGATGCATCCTACTACTATCTCAAGCTACATT
GGCATGTCCCGTGTGGGCCAAACAGTGTCATCACATTCCCCAGCGCACCTTGGTTTAAAC
CTTGGTACTGGTGGTCTTGGCCGGTCTTGCCATTAGGACTTTCCTGGCACAAGCAGCGCT
GGGACGATCTTGGGTATGCTGCTGAAATGCCAGTGGTTCTGATGGAGGTTTTAATGTACA
TAGTTATCATAACAGTCACCAGATTGGCAAGGCCAGGGATGACCAAACTGTGTTATAACC
GACGGCCTGAGAAGCAAAGTGCCCTGGTGCAGTGGCTGATCAAGCTGGCTGCAATTGTGG
CTATGGTGGCTGCCTATTCCATTCCATTCTTTGTGATCCCACGCACAGTTCACCCGATCA
TGGGCTGGTCCATCTACCTATTTGGTGCCCTTGCCTTGTCAGTGCTCGTTATCAATGTTT
TTCTGCTCCCACCACTTGACGTGCTTACAACGTGGCTTGCGATTGTCGGCATGCTCTTCG
TTATGGCATTCCCATGGTACCATGATGGTGTTGTGAGGGCTCTGGCAGTCTTTGGATATG
CATTTTGCTCAGCGCCATTCTTGTGGGCATCCATGGTGAGGATGATGGACTCAGTGCAGA
CGATGCTGGAGAGGGATCCATTCTTCCCCCGGATTGGTGAACCAGCTCAGGAGACTGAAT
TCAGCAAGCTGTTCTGATTCTTTTATGCACAGATTTGAGATGCTTCGTCACCATATGAAC
AGCTGATCCAGATCAGTTTATTCTCGATTGATTCTGGTGGTTTTTGCTCAGGCATTCCAT
TGTGTACTCACAGTAATGTATAAACATTGCCTGCCGCAACCATGATTGATGCAGATGCAG
GAAAGATAGGCCAATTGTACTGAATTGAAAAAAAAAAGCATATTGCTGCATGGAACGGGA
CAGGGGATTGTTGCAAAGTACCTTATTTCTCGCC