Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92145
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:58009649:58012269:1 gene:SORBI_3001G299100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGAAATCTTTGAGAAAATGGAAGTGGAGTTCGTCGACCAAGATGAGAGTGTGCAG
GTTGTTGCAGATAACATCCGTGACACTGGTGAGGTTCCTGAAAGGTATGTCAGGTCTGAG
ATTAAGTCTGATCCTGTCATCATCGATGCCGAGGGTTATAATCTACCGGTAATAGATATG
TCGAGATTGCTCAACCCCGATTTTTCTGAGGAGGAGACTGCTAAGCTTGGATCTGCCTGC
GAGCATTGGGGATTCTTCCAGCTAGTGAACCATGGAATAGATGTAGGATTGTTGCAGCAA
ATCAAGGCCGACATCACCAAGTTCTTCAGTCTTCCACTGGAAGAAAAGTTGGCAGTAGCG
ATTCCACCAAATGGCATCGAAGGGTTTGGCCACCACTTTGTTTTCTCTAAGGAACAGAAG
CTGGACTGGGTCGACATATTGTTCCTTGCCACACGGCCTATTGAGCAAAGGAACCTGTCC
TTCTGGCCTGCAAAGCCTTCCACATTCAGGGACACACTGGATAAGTACTCATTGCAACTG
TCAAATGTTTCTGCACAATTGTTCAAGTTTATGGCCAACAACCTTGGAGTTGACCAGGAG
GTATTCCTTAGTACCTTCAAGGGTCTACCTCAGAGCGTGAGGATCAACTATTACCCTCCC
TGCAGTCAAGCTGACAGGGTCTTAGGCCTCTCACCGCATACGGATGGTGTTGGCATGACA
TTCCTCCTCCATGTCAATGATGTGGAAGGACTACAAATCAGAAAGGATGGAAAATGGTTC
TCTGTGCAGGCCATGCACGGAGCACTTGTTGTCAACATAGGCGATATTATTGAGATCCTC
ACCAATGGGAGGTACAAGAGTGTTGAGCACAGGGCAGTAATAAACCCCAACAAGGAAAGG
ATTACCATCGCAGCATTCCAGAGCATTCACCTTTTCTGCAAAATTGGCCCACTTCAGGAG
TTGCTGACAGCAGACAAGGCACGCTACAAGGTGATGGATGGTGTTGAGTTCACCAAGGGC
TACTTTGCTGCAAAGCTAGAAGGCAGGAGGTACTTGGAGAGCTTGAAGCTAGGCCTATGA

Peptide Sequence

PEP ID

OQU92145
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:58009649:58012269:1 gene:SORBI_3001G299100 transcript:OQU92145 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEIFEKMEVEFVDQDESVQVVADNIRDTGEVPERYVRSEIKSDPVIIDAEGYNLPVIDM
SRLLNPDFSEEETAKLGSACEHWGFFQLVNHGIDVGLLQQIKADITKFFSLPLEEKLAVA
IPPNGIEGFGHHFVFSKEQKLDWVDILFLATRPIEQRNLSFWPAKPSTFRDTLDKYSLQL
SNVSAQLFKFMANNLGVDQEVFLSTFKGLPQSVRINYYPPCSQADRVLGLSPHTDGVGMT
FLLHVNDVEGLQIRKDGKWFSVQAMHGALVVNIGDIIEILTNGRYKSVEHRAVINPNKER
ITIAAFQSIHLFCKIGPLQELLTADKARYKVMDGVEFTKGYFAAKLEGRRYLESLKLGL

Transcript Sequence

Transcript ID

OQU92145
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:58009649:58012269:1 gene:SORBI_3001G299100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAAAGTCTGCTCCAACGGCCTAGGCTATCTTATGTGTGTGTGTGGTGCTGGCACACAGG
CTGCTCCAACGGCCTAGGCACAGCCCTATGGGCCTTGCGCTGGCCCGACAGCCCGACGCC
CGACAAGTAGCAATCCTCAAGGCTCAAGCATTATTATATGCACATCATCCTACAGAAAGT
CTTCGTTTGAAAGTGGAACATGTGCAGATTTGACTTCGTTAGCAGTCATTAATTAGCAAA
ATATATGAAATTATCTGGTAGCTTCCTTTGGAATTAGACTGTGACTGTCATTACAACTTG
CCATGCTAGCTGCCAATCATGAATCCTCTCGTGTAAACTATACGCAGTCTGACTTTCGTG
TGAATTGGTCATTTGTCAGCAACAGGAGCTAGTTGAATCGGGGTAAGCTTGCTGTTTCAA
GGAAATCAAGGGAAGATGGCTGAAATCTTTGAGAAAATGGAAGTGGAGTTCGTCGACCAA
GATGAGAGTGTGCAGGTTGTTGCAGATAACATCCGTGACACTGGTGAGGTTCCTGAAAGG
TATGTCAGGTCTGAGATTAAGTCTGATCCTGTCATCATCGATGCCGAGGGTTATAATCTA
CCGGTAATAGATATGTCGAGATTGCTCAACCCCGATTTTTCTGAGGAGGAGACTGCTAAG
CTTGGATCTGCCTGCGAGCATTGGGGATTCTTCCAGCTAGTGAACCATGGAATAGATGTA
GGATTGTTGCAGCAAATCAAGGCCGACATCACCAAGTTCTTCAGTCTTCCACTGGAAGAA
AAGTTGGCAGTAGCGATTCCACCAAATGGCATCGAAGGGTTTGGCCACCACTTTGTTTTC
TCTAAGGAACAGAAGCTGGACTGGGTCGACATATTGTTCCTTGCCACACGGCCTATTGAG
CAAAGGAACCTGTCCTTCTGGCCTGCAAAGCCTTCCACATTCAGGGACACACTGGATAAG
TACTCATTGCAACTGTCAAATGTTTCTGCACAATTGTTCAAGTTTATGGCCAACAACCTT
GGAGTTGACCAGGAGGTATTCCTTAGTACCTTCAAGGGTCTACCTCAGAGCGTGAGGATC
AACTATTACCCTCCCTGCAGTCAAGCTGACAGGGTCTTAGGCCTCTCACCGCATACGGAT
GGTGTTGGCATGACATTCCTCCTCCATGTCAATGATGTGGAAGGACTACAAATCAGAAAG
GATGGAAAATGGTTCTCTGTGCAGGCCATGCACGGAGCACTTGTTGTCAACATAGGCGAT
ATTATTGAGATCCTCACCAATGGGAGGTACAAGAGTGTTGAGCACAGGGCAGTAATAAAC
CCCAACAAGGAAAGGATTACCATCGCAGCATTCCAGAGCATTCACCTTTTCTGCAAAATT
GGCCCACTTCAGGAGTTGCTGACAGCAGACAAGGCACGCTACAAGGTGATGGATGGTGTT
GAGTTCACCAAGGGCTACTTTGCTGCAAAGCTAGAAGGCAGGAGGTACTTGGAGAGCTTG
AAGCTAGGCCTATGAGATTCTGGTTAGTATTGTATTGTAACATGTTTACCTTAAGCTTTC
CTTTGAATGGGTTGTGATTGATAGCGTTCGTTCGCTTTCAGCAAAGATATGAGTTGGTGT
GAAGATTGACAAGCGCTCATTTTGAAGGCTCACCGTACTTTGGAGACTGCAACATTGAGT
CTCTTTGAGTCCTTCGGATGGCCTTCGTTATTTAGAATTGGGTTTTAAGTTTGTTTGTCA
TAATTTTTTTTTGTGCGCCTTGAATTATTGGGCTGTAATAAGTTGGTTTGATTCCTCTTT
AACGGGGTTAAAGCTGGATAGGCAAAGATATTGTTATAAAACATGTTGCCAGCGGTTGGG
ACCTTTCCCTCTCCGTCTCTCATGATCAATATAGTAGATGAAAGTAGAAGAACA